Protein–RNA interactions for Protein: Q8N1B4

VPS52, Vacuolar protein sorting-associated protein 52 homolog, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52Q8N1B4 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC4.41□□□□□ -1.7
VPS52Q8N1B4 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC4.41□□□□□ -1.7
VPS52Q8N1B4 USP9YP10-201ENST00000454868 628 ntBASIC4.41□□□□□ -1.7
VPS52Q8N1B4 MTCO3P2-201ENST00000457365 171 ntBASIC4.41□□□□□ -1.7
VPS52Q8N1B4 AC091564.1-201ENST00000464563 479 ntBASIC4.41□□□□□ -1.7
VPS52Q8N1B4 AC108145.1-201ENST00000503770 153 ntBASIC4.41□□□□□ -1.7
VPS52Q8N1B4 AC139783.2-201ENST00000504847 1145 ntBASIC4.41□□□□□ -1.7
VPS52Q8N1B4 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC4.41□□□□□ -1.7
VPS52Q8N1B4 USP9YP5-201ENST00000511770 630 ntBASIC4.41□□□□□ -1.7
VPS52Q8N1B4 RN7SKP82-201ENST00000516786 223 ntBASIC4.41□□□□□ -1.7
VPS52Q8N1B4 RNU6-678P-201ENST00000516832 109 ntBASIC4.41□□□□□ -1.7
VPS52Q8N1B4 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC4.41□□□□□ -1.7
VPS52Q8N1B4 IGHV3-32-201ENST00000519182 355 ntBASIC4.41□□□□□ -1.7
VPS52Q8N1B4 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC4.41□□□□□ -1.7
VPS52Q8N1B4 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC4.41□□□□□ -1.7
VPS52Q8N1B4 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC4.41□□□□□ -1.7
VPS52Q8N1B4 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC4.41□□□□□ -1.7
VPS52Q8N1B4 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC4.41□□□□□ -1.7
VPS52Q8N1B4 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC4.41□□□□□ -1.7
VPS52Q8N1B4 AC040904.1-201ENST00000590850 223 ntBASIC4.41□□□□□ -1.7
VPS52Q8N1B4 AC105129.3-201ENST00000605455 485 ntBASIC4.41□□□□□ -1.7
VPS52Q8N1B4 AC245008.1-201ENST00000608123 476 ntBASIC4.41□□□□□ -1.7
VPS52Q8N1B4 uc_338.32-201ENST00000615087 172 ntBASIC4.41□□□□□ -1.7
VPS52Q8N1B4 AC103858.2-201ENST00000621471 543 ntBASIC4.41□□□□□ -1.7
VPS52Q8N1B4 MIR4727-201ENST00000622232 55 ntBASIC4.41□□□□□ -1.7
VPS52Q8N1B4 CR392039.5-201ENST00000623201 510 ntBASIC4.41□□□□□ -1.7
VPS52Q8N1B4 CCT7-217ENST00000626868 249 ntTSL 5 BASIC4.41□□□□□ -1.7
VPS52Q8N1B4 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
VPS52Q8N1B4 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC4.41□□□□□ -1.7
VPS52Q8N1B4 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
VPS52Q8N1B4 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC4.4□□□□□ -1.7
VPS52Q8N1B4 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
VPS52Q8N1B4 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC4.4□□□□□ -1.7
VPS52Q8N1B4 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC4.4□□□□□ -1.7
VPS52Q8N1B4 AC097504.1-201ENST00000515103 2415 ntBASIC4.4□□□□□ -1.7
VPS52Q8N1B4 RNU6-1122P-201ENST00000384449 107 ntBASIC4.4□□□□□ -1.71
VPS52Q8N1B4 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
VPS52Q8N1B4 MIR1183-201ENST00000408856 89 ntBASIC4.4□□□□□ -1.71
VPS52Q8N1B4 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC4.4□□□□□ -1.71
VPS52Q8N1B4 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
VPS52Q8N1B4 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC4.4□□□□□ -1.71
VPS52Q8N1B4 GOT2P5-201ENST00000433995 546 ntBASIC4.4□□□□□ -1.71
VPS52Q8N1B4 AL590103.1-201ENST00000434488 307 ntBASIC4.4□□□□□ -1.71
VPS52Q8N1B4 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC4.4□□□□□ -1.71
VPS52Q8N1B4 ELOCP8-201ENST00000439309 332 ntBASIC4.4□□□□□ -1.71
VPS52Q8N1B4 ELOCP15-201ENST00000442090 332 ntBASIC4.4□□□□□ -1.71
VPS52Q8N1B4 AC006011.1-201ENST00000442758 349 ntBASIC4.4□□□□□ -1.71
VPS52Q8N1B4 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
VPS52Q8N1B4 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC4.4□□□□□ -1.71
VPS52Q8N1B4 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC4.4□□□□□ -1.71
VPS52Q8N1B4 snoU13.22-201ENST00000459428 104 ntBASIC4.4□□□□□ -1.71
VPS52Q8N1B4 AC087879.1-201ENST00000474343 374 ntBASIC4.4□□□□□ -1.71
VPS52Q8N1B4 NCOR1P1-202ENST00000486162 291 ntBASIC4.4□□□□□ -1.71
VPS52Q8N1B4 AC012170.1-201ENST00000495139 359 ntBASIC4.4□□□□□ -1.71
VPS52Q8N1B4 AC108078.3-201ENST00000502633 489 ntBASIC4.4□□□□□ -1.71
VPS52Q8N1B4 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC4.4□□□□□ -1.71
VPS52Q8N1B4 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC4.4□□□□□ -1.71
VPS52Q8N1B4 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC4.4□□□□□ -1.71
VPS52Q8N1B4 AC090071.1-201ENST00000507713 644 ntBASIC4.4□□□□□ -1.71
VPS52Q8N1B4 LTV1P1-201ENST00000510683 1237 ntBASIC4.4□□□□□ -1.71
VPS52Q8N1B4 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC4.4□□□□□ -1.71
VPS52Q8N1B4 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC4.4□□□□□ -1.71
VPS52Q8N1B4 RNU6-583P-201ENST00000516012 92 ntBASIC4.4□□□□□ -1.71
VPS52Q8N1B4 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC4.4□□□□□ -1.71
VPS52Q8N1B4 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC4.4□□□□□ -1.71
VPS52Q8N1B4 OR7K1P-201ENST00000546439 926 ntBASIC4.4□□□□□ -1.71
VPS52Q8N1B4 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC4.4□□□□□ -1.71
VPS52Q8N1B4 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC4.4□□□□□ -1.71
VPS52Q8N1B4 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
VPS52Q8N1B4 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC4.4□□□□□ -1.71
VPS52Q8N1B4 AC124068.1-201ENST00000563131 678 ntBASIC4.4□□□□□ -1.71
VPS52Q8N1B4 MTCYBP28-201ENST00000566728 1132 ntBASIC4.4□□□□□ -1.71
VPS52Q8N1B4 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC4.4□□□□□ -1.71
VPS52Q8N1B4 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC4.4□□□□□ -1.71
VPS52Q8N1B4 AC005255.1-201ENST00000593748 216 ntBASIC4.4□□□□□ -1.71
VPS52Q8N1B4 AC020914.6-201ENST00000594327 272 ntBASIC4.4□□□□□ -1.71
VPS52Q8N1B4 AC024220.1-201ENST00000603675 484 ntBASIC4.4□□□□□ -1.71
VPS52Q8N1B4 HSPE1P14-201ENST00000605812 302 ntBASIC4.4□□□□□ -1.71
VPS52Q8N1B4 MIR432-201ENST00000606207 94 ntBASIC4.4□□□□□ -1.71
VPS52Q8N1B4 AL713922.2-201ENST00000619384 716 ntBASIC4.4□□□□□ -1.71
VPS52Q8N1B4 AC233309.1-201ENST00000619522 751 ntBASIC4.4□□□□□ -1.71
VPS52Q8N1B4 C2orf27A-204ENST00000623058 969 ntBASIC4.4□□□□□ -1.71
VPS52Q8N1B4 AC091965.5-201ENST00000624785 342 ntBASIC4.4□□□□□ -1.71
VPS52Q8N1B4 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
VPS52Q8N1B4 OTUD4P1-201ENST00000237841 3067 ntBASIC4.4□□□□□ -1.71
VPS52Q8N1B4 MARK2P15-201ENST00000432204 2186 ntBASIC4.4□□□□□ -1.71
VPS52Q8N1B4 HSP90AA5P-201ENST00000438353 2192 ntBASIC4.4□□□□□ -1.71
VPS52Q8N1B4 MTND5P24-201ENST00000438892 1767 ntBASIC4.4□□□□□ -1.71
VPS52Q8N1B4 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
VPS52Q8N1B4 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC4.39□□□□□ -1.71
VPS52Q8N1B4 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC4.39□□□□□ -1.71
VPS52Q8N1B4 AC021755.1-201ENST00000559747 1447 ntBASIC4.39□□□□□ -1.71
VPS52Q8N1B4 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
VPS52Q8N1B4 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC4.39□□□□□ -1.71
VPS52Q8N1B4 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
VPS52Q8N1B4 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC4.39□□□□□ -1.71
VPS52Q8N1B4 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC4.39□□□□□ -1.71
VPS52Q8N1B4 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
VPS52Q8N1B4 ACEA_U3.1-201ENST00000363057 217 ntBASIC4.39□□□□□ -1.71
VPS52Q8N1B4 5S_rRNA.1-201ENST00000364415 116 ntBASIC4.39□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 92.8 ms