Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 RNU11-4P-201ENST00000391149 133 ntBASIC6.03□□□□□ -1.44
SIX5Q8N196 SOD2P1-201ENST00000396543 562 ntBASIC6.03□□□□□ -1.44
SIX5Q8N196 AC009804.1-201ENST00000400949 179 ntBASIC6.03□□□□□ -1.44
SIX5Q8N196 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC6.03□□□□□ -1.44
SIX5Q8N196 RAC1P6-201ENST00000423911 575 ntBASIC6.03□□□□□ -1.44
SIX5Q8N196 AL772161.1-201ENST00000439130 476 ntBASIC6.03□□□□□ -1.44
SIX5Q8N196 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC6.03□□□□□ -1.44
SIX5Q8N196 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC6.03□□□□□ -1.44
SIX5Q8N196 MTND1P17-201ENST00000448961 204 ntBASIC6.03□□□□□ -1.44
SIX5Q8N196 RPL23AP60-201ENST00000450011 454 ntBASIC6.03□□□□□ -1.44
SIX5Q8N196 SCARNA18-201ENST00000459004 134 ntBASIC6.03□□□□□ -1.44
SIX5Q8N196 TRBV1-201ENST00000476502 284 ntBASIC6.03□□□□□ -1.44
SIX5Q8N196 RN7SL432P-201ENST00000484057 298 ntBASIC6.03□□□□□ -1.44
SIX5Q8N196 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC6.03□□□□□ -1.44
SIX5Q8N196 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC6.03□□□□□ -1.44
SIX5Q8N196 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC6.03□□□□□ -1.44
SIX5Q8N196 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC6.03□□□□□ -1.44
SIX5Q8N196 AL117187.1-201ENST00000555482 181 ntBASIC6.03□□□□□ -1.44
SIX5Q8N196 AC026471.4-201ENST00000569291 449 ntTSL 5 BASIC6.03□□□□□ -1.44
SIX5Q8N196 MIR4293-201ENST00000584305 78 ntBASIC6.03□□□□□ -1.44
SIX5Q8N196 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC6.03□□□□□ -1.44
SIX5Q8N196 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC6.03□□□□□ -1.44
SIX5Q8N196 AC007938.3-201ENST00000604965 623 ntBASIC6.03□□□□□ -1.44
SIX5Q8N196 AC119674.1-207ENST00000641355 633 ntBASIC6.03□□□□□ -1.44
SIX5Q8N196 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
SIX5Q8N196 GOLT1B-201ENST00000229314 3227 ntAPPRIS P2 TSL 1 (best) BASIC6.03□□□□□ -1.44
SIX5Q8N196 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC6.03□□□□□ -1.44
SIX5Q8N196 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC6.03□□□□□ -1.44
SIX5Q8N196 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
SIX5Q8N196 POLR2B-202ENST00000381227 4108 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
SIX5Q8N196 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC6.03□□□□□ -1.44
SIX5Q8N196 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
SIX5Q8N196 GOLGB1-202ENST00000393667 11198 ntAPPRIS ALT2 TSL 1 (best) BASIC6.03□□□□□ -1.44
SIX5Q8N196 PCLO-201ENST00000333891 20329 ntAPPRIS P1 TSL 2 BASIC6.03□□□□□ -1.44
SIX5Q8N196 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC6.03□□□□□ -1.44
SIX5Q8N196 AC025470.1-201ENST00000510053 2032 ntBASIC6.03□□□□□ -1.44
SIX5Q8N196 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
SIX5Q8N196 SRRM1P3-201ENST00000426911 2678 ntBASIC6.02□□□□□ -1.44
SIX5Q8N196 CCAR1-201ENST00000265872 4683 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
SIX5Q8N196 AC011504.1-201ENST00000623331 4103 ntBASIC6.02□□□□□ -1.45
SIX5Q8N196 DNAH3-201ENST00000261383 12394 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
SIX5Q8N196 TTI1-203ENST00000449821 3791 ntAPPRIS P1 TSL 2 BASIC6.02□□□□□ -1.45
SIX5Q8N196 C2CD5-206ENST00000536386 3496 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
SIX5Q8N196 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
SIX5Q8N196 Y_RNA.148-201ENST00000363557 117 ntBASIC6.02□□□□□ -1.45
SIX5Q8N196 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC6.02□□□□□ -1.45
SIX5Q8N196 RNU6-331P-201ENST00000384724 107 ntBASIC6.02□□□□□ -1.45
SIX5Q8N196 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
SIX5Q8N196 AC005042.1-201ENST00000393397 800 ntBASIC6.02□□□□□ -1.45
SIX5Q8N196 AL360182.1-201ENST00000397433 468 ntBASIC6.02□□□□□ -1.45
SIX5Q8N196 AC009302.1-201ENST00000417147 390 ntBASIC6.02□□□□□ -1.45
SIX5Q8N196 RPL7P10-201ENST00000417407 739 ntBASIC6.02□□□□□ -1.45
SIX5Q8N196 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC6.02□□□□□ -1.45
SIX5Q8N196 AL590609.2-201ENST00000421430 368 ntBASIC6.02□□□□□ -1.45
SIX5Q8N196 SKA2P1-201ENST00000425592 390 ntBASIC6.02□□□□□ -1.45
SIX5Q8N196 SNAP23P1-201ENST00000433229 246 ntBASIC6.02□□□□□ -1.45
SIX5Q8N196 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC6.02□□□□□ -1.45
SIX5Q8N196 AL035666.1-201ENST00000446195 348 ntBASIC6.02□□□□□ -1.45
SIX5Q8N196 AC234775.1-201ENST00000454247 670 ntBASIC6.02□□□□□ -1.45
SIX5Q8N196 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC6.02□□□□□ -1.45
SIX5Q8N196 AC116533.1-201ENST00000459748 321 ntBASIC6.02□□□□□ -1.45
SIX5Q8N196 RPS17P15-201ENST00000475609 349 ntBASIC6.02□□□□□ -1.45
SIX5Q8N196 RN7SL165P-201ENST00000477476 291 ntBASIC6.02□□□□□ -1.45
SIX5Q8N196 RPS4XP1-201ENST00000482189 787 ntBASIC6.02□□□□□ -1.45
SIX5Q8N196 AC058823.1-201ENST00000485315 474 ntBASIC6.02□□□□□ -1.45
SIX5Q8N196 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC6.02□□□□□ -1.45
SIX5Q8N196 AC006296.2-201ENST00000507932 764 ntTSL 3 BASIC6.02□□□□□ -1.45
SIX5Q8N196 MTCO3P44-201ENST00000510977 541 ntBASIC6.02□□□□□ -1.45
SIX5Q8N196 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC6.02□□□□□ -1.45
SIX5Q8N196 RANP9-201ENST00000519957 271 ntBASIC6.02□□□□□ -1.45
SIX5Q8N196 COX6CP5-201ENST00000527162 228 ntBASIC6.02□□□□□ -1.45
SIX5Q8N196 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC6.02□□□□□ -1.45
SIX5Q8N196 DEFB108D-201ENST00000527787 222 ntBASIC6.02□□□□□ -1.45
SIX5Q8N196 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC6.02□□□□□ -1.45
SIX5Q8N196 SETP7-201ENST00000552169 453 ntBASIC6.02□□□□□ -1.45
SIX5Q8N196 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC6.02□□□□□ -1.45
SIX5Q8N196 AC015720.2-201ENST00000567709 334 ntBASIC6.02□□□□□ -1.45
SIX5Q8N196 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC6.02□□□□□ -1.45
SIX5Q8N196 AC090425.1-201ENST00000610007 140 ntBASIC6.02□□□□□ -1.45
SIX5Q8N196 AC006329.2-201ENST00000611491 394 ntBASIC6.02□□□□□ -1.45
SIX5Q8N196 AL139099.4-201ENST00000614802 114 ntBASIC6.02□□□□□ -1.45
SIX5Q8N196 AC010378.1-201ENST00000619270 362 ntBASIC6.02□□□□□ -1.45
SIX5Q8N196 AC022418.1-201ENST00000624118 445 ntBASIC6.02□□□□□ -1.45
SIX5Q8N196 L3MBTL3-209ENST00000533560 3165 ntAPPRIS ALT2 TSL 1 (best) BASIC6.02□□□□□ -1.45
SIX5Q8N196 IQCB2P-201ENST00000401788 1633 ntBASIC6.02□□□□□ -1.45
SIX5Q8N196 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC6.02□□□□□ -1.45
SIX5Q8N196 LINC00939-201ENST00000502479 4972 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
SIX5Q8N196 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC6.02□□□□□ -1.45
SIX5Q8N196 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
SIX5Q8N196 NR5A2-203ENST00000367362 5086 ntAPPRIS P3 TSL 1 (best) BASIC6.02□□□□□ -1.45
SIX5Q8N196 RAD51B-210ENST00000487270 2596 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
SIX5Q8N196 IFIT1-202ENST00000546318 4613 ntTSL 3 BASIC6.02□□□□□ -1.45
SIX5Q8N196 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC6.01□□□□□ -1.45
SIX5Q8N196 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC6.01□□□□□ -1.45
SIX5Q8N196 ECT2L-205ENST00000541398 4483 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
SIX5Q8N196 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
SIX5Q8N196 BDNF-203ENST00000395978 3988 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
SIX5Q8N196 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC6.01□□□□□ -1.45
SIX5Q8N196 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
SIX5Q8N196 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC6.01□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 158.7 ms