Protein–RNA interactions for Protein: Q8IYX3

CCDC116, Coiled-coil domain-containing protein 116, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116Q8IYX3 IGHV4-55-201ENST00000520889 368 ntBASIC5.93□□□□□ -1.46
CCDC116Q8IYX3 MAL2-201ENST00000522112 573 ntTSL 4 BASIC5.93□□□□□ -1.46
CCDC116Q8IYX3 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC5.93□□□□□ -1.46
CCDC116Q8IYX3 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC5.93□□□□□ -1.46
CCDC116Q8IYX3 AC006512.2-201ENST00000543250 486 ntBASIC5.93□□□□□ -1.46
CCDC116Q8IYX3 LINC00944-204ENST00000544499 366 ntTSL 5 BASIC5.93□□□□□ -1.46
CCDC116Q8IYX3 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC5.93□□□□□ -1.46
CCDC116Q8IYX3 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC5.93□□□□□ -1.46
CCDC116Q8IYX3 TRIM37-212ENST00000584889 353 ntTSL 2 BASIC5.93□□□□□ -1.46
CCDC116Q8IYX3 AC073410.2-201ENST00000603240 332 ntBASIC5.93□□□□□ -1.46
CCDC116Q8IYX3 IGLVIVOR22-1-201ENST00000603243 397 ntBASIC5.93□□□□□ -1.46
CCDC116Q8IYX3 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC5.93□□□□□ -1.46
CCDC116Q8IYX3 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
CCDC116Q8IYX3 MDN1-205ENST00000629399 17400 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
CCDC116Q8IYX3 LEPR-205ENST00000371060 5135 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
CCDC116Q8IYX3 AC110373.1-201ENST00000505994 3505 ntBASIC5.93□□□□□ -1.46
CCDC116Q8IYX3 NCOR1-202ENST00000395848 3106 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
CCDC116Q8IYX3 CYLD-210ENST00000566206 3104 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
CCDC116Q8IYX3 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
CCDC116Q8IYX3 HSPA8P4-201ENST00000511877 1920 ntBASIC5.93□□□□□ -1.46
CCDC116Q8IYX3 RUBCNL-205ENST00000389908 3956 ntAPPRIS P3 TSL 2 BASIC5.93□□□□□ -1.46
CCDC116Q8IYX3 SLX4IP-201ENST00000334534 6062 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
CCDC116Q8IYX3 MARCH7-201ENST00000259050 5922 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
CCDC116Q8IYX3 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC5.93□□□□□ -1.46
CCDC116Q8IYX3 ZNF184-202ENST00000377419 2899 ntAPPRIS P1 TSL 4 BASIC5.92□□□□□ -1.46
CCDC116Q8IYX3 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
CCDC116Q8IYX3 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC5.92□□□□□ -1.46
CCDC116Q8IYX3 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC5.92□□□□□ -1.46
CCDC116Q8IYX3 OR2T5-201ENST00000641363 2525 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
CCDC116Q8IYX3 MDGA2-201ENST00000357362 2965 ntTSL 5 BASIC5.92□□□□□ -1.46
CCDC116Q8IYX3 CYBB-201ENST00000378588 4324 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
CCDC116Q8IYX3 SSH1-202ENST00000326495 13040 ntAPPRIS P3 TSL 1 (best) BASIC5.92□□□□□ -1.46
CCDC116Q8IYX3 LINC01422-201ENST00000434868 6043 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
CCDC116Q8IYX3 GTF3C3-202ENST00000409364 1736 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
CCDC116Q8IYX3 RNA5SP77-201ENST00000365394 120 ntBASIC5.92□□□□□ -1.46
CCDC116Q8IYX3 SNORA64.3-201ENST00000365647 134 ntBASIC5.92□□□□□ -1.46
CCDC116Q8IYX3 ST3GAL3-212ENST00000372362 468 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
CCDC116Q8IYX3 RNU6-48P-201ENST00000384161 107 ntBASIC5.92□□□□□ -1.46
CCDC116Q8IYX3 Y_RNA.471-201ENST00000384312 102 ntBASIC5.92□□□□□ -1.46
CCDC116Q8IYX3 RNU6-378P-201ENST00000384324 107 ntBASIC5.92□□□□□ -1.46
CCDC116Q8IYX3 MIR551B-201ENST00000384984 96 ntBASIC5.92□□□□□ -1.46
CCDC116Q8IYX3 MIR92A2-201ENST00000385299 75 ntBASIC5.92□□□□□ -1.46
CCDC116Q8IYX3 RNA5SP178-201ENST00000410380 128 ntBASIC5.92□□□□□ -1.46
CCDC116Q8IYX3 RNU6-121P-201ENST00000410525 99 ntBASIC5.92□□□□□ -1.46
CCDC116Q8IYX3 RNU6-1203P-201ENST00000410703 110 ntBASIC5.92□□□□□ -1.46
CCDC116Q8IYX3 AC116036.1-201ENST00000412199 367 ntBASIC5.92□□□□□ -1.46
CCDC116Q8IYX3 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC5.92□□□□□ -1.46
CCDC116Q8IYX3 RPL21P50-201ENST00000417698 477 ntBASIC5.92□□□□□ -1.46
CCDC116Q8IYX3 AC013403.1-201ENST00000436954 263 ntBASIC5.92□□□□□ -1.46
CCDC116Q8IYX3 AC064862.5-201ENST00000440618 334 ntBASIC5.92□□□□□ -1.46
CCDC116Q8IYX3 AC098831.1-201ENST00000440661 216 ntBASIC5.92□□□□□ -1.46
CCDC116Q8IYX3 RPL12P49-201ENST00000441100 121 ntBASIC5.92□□□□□ -1.46
CCDC116Q8IYX3 AL356121.1-201ENST00000442911 156 ntBASIC5.92□□□□□ -1.46
CCDC116Q8IYX3 AC073476.1-201ENST00000452854 407 ntBASIC5.92□□□□□ -1.46
CCDC116Q8IYX3 AC104164.1-201ENST00000460282 590 ntBASIC5.92□□□□□ -1.46
CCDC116Q8IYX3 RN7SL221P-201ENST00000466190 281 ntBASIC5.92□□□□□ -1.46
CCDC116Q8IYX3 RN7SL369P-201ENST00000477138 299 ntBASIC5.92□□□□□ -1.46
CCDC116Q8IYX3 WDFY3-AS1-201ENST00000510449 493 ntTSL 3 BASIC5.92□□□□□ -1.46
CCDC116Q8IYX3 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC5.92□□□□□ -1.46
CCDC116Q8IYX3 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC5.92□□□□□ -1.46
CCDC116Q8IYX3 AL049836.2-201ENST00000553318 513 ntTSL 5 BASIC5.92□□□□□ -1.46
CCDC116Q8IYX3 MIR3157-201ENST00000578688 85 ntBASIC5.92□□□□□ -1.46
CCDC116Q8IYX3 AC005180.2-201ENST00000585620 562 ntTSL 3 BASIC5.92□□□□□ -1.46
CCDC116Q8IYX3 AC004917.1-204ENST00000592441 701 ntTSL 2 BASIC5.92□□□□□ -1.46
CCDC116Q8IYX3 AC010620.2-201ENST00000600135 313 ntBASIC5.92□□□□□ -1.46
CCDC116Q8IYX3 RPS29P30-201ENST00000600975 111 ntBASIC5.92□□□□□ -1.46
CCDC116Q8IYX3 AC012368.3-201ENST00000604190 219 ntBASIC5.92□□□□□ -1.46
CCDC116Q8IYX3 FAM27E4-201ENST00000605259 342 ntBASIC5.92□□□□□ -1.46
CCDC116Q8IYX3 NQO2-209ENST00000606474 470 ntTSL 3 BASIC5.92□□□□□ -1.46
CCDC116Q8IYX3 MIR7159-201ENST00000620587 66 ntBASIC5.92□□□□□ -1.46
CCDC116Q8IYX3 AL161637.1-201ENST00000622380 412 ntBASIC5.92□□□□□ -1.46
CCDC116Q8IYX3 AC089999.3-201ENST00000622440 577 ntBASIC5.92□□□□□ -1.46
CCDC116Q8IYX3 LINC01002-237ENST00000634025 555 ntTSL 5 BASIC5.92□□□□□ -1.46
CCDC116Q8IYX3 RMDN2-201ENST00000234195 1985 ntTSL 2 BASIC5.92□□□□□ -1.46
CCDC116Q8IYX3 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
CCDC116Q8IYX3 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC5.92□□□□□ -1.46
CCDC116Q8IYX3 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC5.92□□□□□ -1.46
CCDC116Q8IYX3 CASP10-202ENST00000286186 5928 ntAPPRIS P4 TSL 1 (best) BASIC5.92□□□□□ -1.46
CCDC116Q8IYX3 AL359854.1-201ENST00000614203 1594 ntBASIC5.92□□□□□ -1.46
CCDC116Q8IYX3 GVINP1-201ENST00000526769 8438 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
CCDC116Q8IYX3 FAM197Y6-202ENST00000442145 2340 ntTSL 2 BASIC5.92□□□□□ -1.46
CCDC116Q8IYX3 USP37-205ENST00000454775 5019 ntAPPRIS P1 TSL 2 BASIC5.92□□□□□ -1.46
CCDC116Q8IYX3 SNW1-205ENST00000555761 1855 ntTSL 2 BASIC5.92□□□□□ -1.46
CCDC116Q8IYX3 ZNF337-AS1-201ENST00000414393 4666 ntTSL 2 BASIC5.92□□□□□ -1.46
CCDC116Q8IYX3 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC5.92□□□□□ -1.46
CCDC116Q8IYX3 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC5.92□□□□□ -1.46
CCDC116Q8IYX3 AP001541.1-201ENST00000623322 1904 ntBASIC5.91□□□□□ -1.46
CCDC116Q8IYX3 EDA2R-204ENST00000451436 3464 ntAPPRIS P3 TSL 5 BASIC5.91□□□□□ -1.46
CCDC116Q8IYX3 FMN1-212ENST00000616417 13529 ntAPPRIS ALT2 TSL 5 BASIC5.91□□□□□ -1.46
CCDC116Q8IYX3 TBC1D5-201ENST00000253692 7854 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
CCDC116Q8IYX3 AKAP7-201ENST00000263050 2238 ntTSL 5 BASIC5.91□□□□□ -1.46
CCDC116Q8IYX3 AL137003.2-201ENST00000606924 2538 ntBASIC5.91□□□□□ -1.46
CCDC116Q8IYX3 ARHGAP20-206ENST00000533353 6066 ntAPPRIS ALT2 TSL 1 (best) BASIC5.91□□□□□ -1.46
CCDC116Q8IYX3 AL731532.1-201ENST00000623972 4236 ntBASIC5.91□□□□□ -1.46
CCDC116Q8IYX3 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
CCDC116Q8IYX3 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC5.91□□□□□ -1.46
CCDC116Q8IYX3 PANDAR-201ENST00000629595 1506 ntBASIC5.91□□□□□ -1.46
CCDC116Q8IYX3 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
CCDC116Q8IYX3 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
CCDC116Q8IYX3 CRYBA1-201ENST00000225387 783 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 87.8 ms