Protein–RNA interactions for Protein: Q8IXS2

CCDC65, Coiled-coil domain-containing protein 65, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65Q8IXS2 RAB11AP1-201ENST00000442978 646 ntBASIC3.52□□□□□ -1.85
CCDC65Q8IXS2 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC3.52□□□□□ -1.85
CCDC65Q8IXS2 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC3.52□□□□□ -1.85
CCDC65Q8IXS2 PRSS3P4-201ENST00000453323 162 ntBASIC3.52□□□□□ -1.85
CCDC65Q8IXS2 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
CCDC65Q8IXS2 RAD51AP1P1-201ENST00000484195 1001 ntBASIC3.52□□□□□ -1.85
CCDC65Q8IXS2 RPL32P34-201ENST00000486380 400 ntBASIC3.52□□□□□ -1.85
CCDC65Q8IXS2 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.52□□□□□ -1.85
CCDC65Q8IXS2 POU5F1P7-201ENST00000508759 541 ntBASIC3.52□□□□□ -1.85
CCDC65Q8IXS2 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.52□□□□□ -1.85
CCDC65Q8IXS2 OR8L1P-201ENST00000534005 955 ntBASIC3.52□□□□□ -1.85
CCDC65Q8IXS2 AC063947.1-201ENST00000549036 557 ntTSL 4 BASIC3.52□□□□□ -1.85
CCDC65Q8IXS2 LYZ-203ENST00000549690 669 ntTSL 2 BASIC3.52□□□□□ -1.85
CCDC65Q8IXS2 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC3.52□□□□□ -1.85
CCDC65Q8IXS2 AC079148.1-201ENST00000565944 819 ntBASIC3.52□□□□□ -1.85
CCDC65Q8IXS2 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC3.52□□□□□ -1.85
CCDC65Q8IXS2 AC034268.2-201ENST00000571784 482 ntBASIC3.52□□□□□ -1.85
CCDC65Q8IXS2 AC090312.2-201ENST00000582687 378 ntBASIC3.52□□□□□ -1.85
CCDC65Q8IXS2 AC007673.1-201ENST00000590604 1100 ntTSL 5 BASIC3.52□□□□□ -1.85
CCDC65Q8IXS2 AC008687.2-201ENST00000597865 520 ntBASIC3.52□□□□□ -1.85
CCDC65Q8IXS2 AL109653.1-201ENST00000603091 248 ntBASIC3.52□□□□□ -1.85
CCDC65Q8IXS2 AC245100.7-201ENST00000609678 442 ntBASIC3.52□□□□□ -1.85
CCDC65Q8IXS2 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC3.52□□□□□ -1.85
CCDC65Q8IXS2 AC084757.4-201ENST00000616350 526 ntBASIC3.52□□□□□ -1.85
CCDC65Q8IXS2 AL590240.3-201ENST00000621416 943 ntBASIC3.52□□□□□ -1.85
CCDC65Q8IXS2 AC092608.3-201ENST00000625017 386 ntBASIC3.52□□□□□ -1.85
CCDC65Q8IXS2 AL356118.1-201ENST00000635272 1078 ntBASIC3.52□□□□□ -1.85
CCDC65Q8IXS2 AC017104.5-201ENST00000637647 639 ntBASIC3.52□□□□□ -1.85
CCDC65Q8IXS2 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.52□□□□□ -1.85
CCDC65Q8IXS2 AL512283.1-201ENST00000606756 1384 ntBASIC3.51□□□□□ -1.85
CCDC65Q8IXS2 AC016716.1-201ENST00000265882 708 ntBASIC3.51□□□□□ -1.85
CCDC65Q8IXS2 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
CCDC65Q8IXS2 RNA5SP267-201ENST00000364893 126 ntBASIC3.51□□□□□ -1.85
CCDC65Q8IXS2 IARS-201ENST00000375627 697 ntTSL 3 BASIC3.51□□□□□ -1.85
CCDC65Q8IXS2 AL354719.1-201ENST00000406535 843 ntBASIC3.51□□□□□ -1.85
CCDC65Q8IXS2 SNORA11C-201ENST00000408532 129 ntBASIC3.51□□□□□ -1.85
CCDC65Q8IXS2 NUP35P2-201ENST00000416748 943 ntBASIC3.51□□□□□ -1.85
CCDC65Q8IXS2 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC3.51□□□□□ -1.85
CCDC65Q8IXS2 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC3.51□□□□□ -1.85
CCDC65Q8IXS2 B3GNT2P1-201ENST00000434960 952 ntBASIC3.51□□□□□ -1.85
CCDC65Q8IXS2 RPL23AP22-201ENST00000437556 453 ntBASIC3.51□□□□□ -1.85
CCDC65Q8IXS2 AC006028.1-201ENST00000438379 402 ntBASIC3.51□□□□□ -1.85
CCDC65Q8IXS2 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
CCDC65Q8IXS2 Z75741.1-201ENST00000446793 314 ntBASIC3.51□□□□□ -1.85
CCDC65Q8IXS2 RPL7P52-201ENST00000449200 742 ntBASIC3.51□□□□□ -1.85
CCDC65Q8IXS2 AC093392.2-201ENST00000450682 337 ntBASIC3.51□□□□□ -1.85
CCDC65Q8IXS2 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
CCDC65Q8IXS2 AL592161.1-201ENST00000456389 861 ntTSL 3 BASIC3.51□□□□□ -1.85
CCDC65Q8IXS2 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC3.51□□□□□ -1.85
CCDC65Q8IXS2 AC078857.1-201ENST00000469870 667 ntBASIC3.51□□□□□ -1.85
CCDC65Q8IXS2 RN7SL601P-201ENST00000471221 293 ntBASIC3.51□□□□□ -1.85
CCDC65Q8IXS2 AC109925.1-201ENST00000478069 331 ntBASIC3.51□□□□□ -1.85
CCDC65Q8IXS2 RPS27P23-201ENST00000487608 251 ntBASIC3.51□□□□□ -1.85
CCDC65Q8IXS2 KCTD9P5-201ENST00000504141 1170 ntBASIC3.51□□□□□ -1.85
CCDC65Q8IXS2 AC016065.2-201ENST00000514530 444 ntBASIC3.51□□□□□ -1.85
CCDC65Q8IXS2 AC027338.1-201ENST00000514840 825 ntBASIC3.51□□□□□ -1.85
CCDC65Q8IXS2 RN7SKP282-201ENST00000516824 299 ntBASIC3.51□□□□□ -1.85
CCDC65Q8IXS2 RN7SKP277-201ENST00000516895 283 ntBASIC3.51□□□□□ -1.85
CCDC65Q8IXS2 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC3.51□□□□□ -1.85
CCDC65Q8IXS2 AF279873.1-201ENST00000523393 313 ntBASIC3.51□□□□□ -1.85
CCDC65Q8IXS2 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC3.51□□□□□ -1.85
CCDC65Q8IXS2 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC3.51□□□□□ -1.85
CCDC65Q8IXS2 AP003168.1-201ENST00000530091 307 ntBASIC3.51□□□□□ -1.85
CCDC65Q8IXS2 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC3.51□□□□□ -1.85
CCDC65Q8IXS2 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC3.51□□□□□ -1.85
CCDC65Q8IXS2 AC005776.1-201ENST00000603164 290 ntBASIC3.51□□□□□ -1.85
CCDC65Q8IXS2 MIR8084-201ENST00000614105 89 ntBASIC3.51□□□□□ -1.85
CCDC65Q8IXS2 AC138932.5-201ENST00000617759 563 ntBASIC3.51□□□□□ -1.85
CCDC65Q8IXS2 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC3.51□□□□□ -1.85
CCDC65Q8IXS2 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
CCDC65Q8IXS2 MTND5P24-201ENST00000438892 1767 ntBASIC3.51□□□□□ -1.85
CCDC65Q8IXS2 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC3.5□□□□□ -1.85
CCDC65Q8IXS2 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
CCDC65Q8IXS2 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
CCDC65Q8IXS2 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC3.5□□□□□ -1.85
CCDC65Q8IXS2 RNU4-47P-201ENST00000410876 114 ntBASIC3.5□□□□□ -1.85
CCDC65Q8IXS2 AC019070.1-201ENST00000415008 1024 ntBASIC3.5□□□□□ -1.85
CCDC65Q8IXS2 SDCBPP3-201ENST00000419629 891 ntBASIC3.5□□□□□ -1.85
CCDC65Q8IXS2 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC3.5□□□□□ -1.85
CCDC65Q8IXS2 FTH1P1-201ENST00000437933 532 ntBASIC3.5□□□□□ -1.85
CCDC65Q8IXS2 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC3.5□□□□□ -1.85
CCDC65Q8IXS2 AC004865.1-201ENST00000442276 1003 ntBASIC3.5□□□□□ -1.85
CCDC65Q8IXS2 ANKRD30BP3-201ENST00000444850 1070 ntBASIC3.5□□□□□ -1.85
CCDC65Q8IXS2 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC3.5□□□□□ -1.85
CCDC65Q8IXS2 BTF3P5-201ENST00000457252 467 ntBASIC3.5□□□□□ -1.85
CCDC65Q8IXS2 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC3.5□□□□□ -1.85
CCDC65Q8IXS2 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC3.5□□□□□ -1.85
CCDC65Q8IXS2 PRDX3P4-201ENST00000470828 747 ntBASIC3.5□□□□□ -1.85
CCDC65Q8IXS2 AC114967.1-201ENST00000504890 259 ntBASIC3.5□□□□□ -1.85
CCDC65Q8IXS2 HSPD1P15-201ENST00000505573 1122 ntBASIC3.5□□□□□ -1.85
CCDC65Q8IXS2 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC3.5□□□□□ -1.85
CCDC65Q8IXS2 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC3.5□□□□□ -1.85
CCDC65Q8IXS2 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC3.5□□□□□ -1.85
CCDC65Q8IXS2 AC074029.1-201ENST00000552531 1044 ntBASIC3.5□□□□□ -1.85
CCDC65Q8IXS2 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC3.5□□□□□ -1.85
CCDC65Q8IXS2 AC090616.5-202ENST00000582111 297 ntBASIC3.5□□□□□ -1.85
CCDC65Q8IXS2 AC068025.2-201ENST00000584958 419 ntTSL 5 BASIC3.5□□□□□ -1.85
CCDC65Q8IXS2 RN7SL622P-201ENST00000585292 275 ntBASIC3.5□□□□□ -1.85
CCDC65Q8IXS2 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC3.5□□□□□ -1.85
CCDC65Q8IXS2 AL606834.2-201ENST00000602954 668 ntBASIC3.5□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 94.5 ms