Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 AC093227.2-201ENST00000589357 285 ntBASIC6.49□□□□□ -1.37
SCUBE3Q8IX30 AC243967.1-201ENST00000598976 578 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
SCUBE3Q8IX30 AC124916.2-201ENST00000604416 224 ntBASIC6.49□□□□□ -1.37
SCUBE3Q8IX30 Xist_exon4.1-201ENST00000615964 126 ntBASIC6.49□□□□□ -1.37
SCUBE3Q8IX30 PCBP1-AS1-360ENST00000630377 598 ntTSL 5 BASIC6.49□□□□□ -1.37
SCUBE3Q8IX30 AL450472.1-202ENST00000637286 180 ntBASIC6.49□□□□□ -1.37
SCUBE3Q8IX30 AC073869.10-201ENST00000642016 354 ntBASIC6.49□□□□□ -1.37
SCUBE3Q8IX30 AC027575.3-201ENST00000583058 2747 ntBASIC6.49□□□□□ -1.37
SCUBE3Q8IX30 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
SCUBE3Q8IX30 RXFP2-201ENST00000298386 3319 ntAPPRIS P3 TSL 1 (best) BASIC6.49□□□□□ -1.37
SCUBE3Q8IX30 SRGAP1-207ENST00000631006 8406 ntTSL 5 BASIC6.49□□□□□ -1.37
SCUBE3Q8IX30 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
SCUBE3Q8IX30 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC6.49□□□□□ -1.37
SCUBE3Q8IX30 MAPK10-341ENST00000641657 3860 ntAPPRIS P2 BASIC6.49□□□□□ -1.37
SCUBE3Q8IX30 PDE1A-204ENST00000410103 2000 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
SCUBE3Q8IX30 PSMB2-202ENST00000621781 4217 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
SCUBE3Q8IX30 TMEM8B-202ENST00000377991 14112 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
SCUBE3Q8IX30 TM4SF20-201ENST00000304568 2296 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
SCUBE3Q8IX30 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC6.48□□□□□ -1.37
SCUBE3Q8IX30 KCNJ2-201ENST00000243457 5392 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
SCUBE3Q8IX30 NBPF19-205ENST00000612881 3715 ntTSL 5 BASIC6.48□□□□□ -1.37
SCUBE3Q8IX30 AC024651.2-201ENST00000562480 2098 ntBASIC6.48□□□□□ -1.37
SCUBE3Q8IX30 EEF1A1P36-201ENST00000427807 1351 ntBASIC6.48□□□□□ -1.37
SCUBE3Q8IX30 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC6.48□□□□□ -1.37
SCUBE3Q8IX30 AC007402.1-201ENST00000440698 3939 ntTSL 2 BASIC6.48□□□□□ -1.37
SCUBE3Q8IX30 USP37-205ENST00000454775 5019 ntAPPRIS P1 TSL 2 BASIC6.48□□□□□ -1.37
SCUBE3Q8IX30 RNU6-596P-201ENST00000365395 98 ntBASIC6.48□□□□□ -1.37
SCUBE3Q8IX30 S100A5-201ENST00000368717 506 ntAPPRIS P1 TSL 3 BASIC6.48□□□□□ -1.37
SCUBE3Q8IX30 SNORA77.2-201ENST00000408571 112 ntBASIC6.48□□□□□ -1.37
SCUBE3Q8IX30 AL137071.1-201ENST00000422150 243 ntTSL 3 BASIC6.48□□□□□ -1.37
SCUBE3Q8IX30 PRUNEP1-201ENST00000425846 705 ntBASIC6.48□□□□□ -1.37
SCUBE3Q8IX30 AL355339.1-201ENST00000434386 435 ntTSL 2 BASIC6.48□□□□□ -1.37
SCUBE3Q8IX30 RPL5P7-201ENST00000444235 813 ntBASIC6.48□□□□□ -1.37
SCUBE3Q8IX30 AL353691.1-201ENST00000451332 387 ntBASIC6.48□□□□□ -1.37
SCUBE3Q8IX30 RNU7-169P-201ENST00000459456 61 ntBASIC6.48□□□□□ -1.37
SCUBE3Q8IX30 RN7SL254P-201ENST00000460609 284 ntBASIC6.48□□□□□ -1.37
SCUBE3Q8IX30 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
SCUBE3Q8IX30 AC104057.1-201ENST00000515547 497 ntBASIC6.48□□□□□ -1.37
SCUBE3Q8IX30 RNA5SP434-201ENST00000516647 121 ntBASIC6.48□□□□□ -1.37
SCUBE3Q8IX30 AC060775.1-201ENST00000518241 520 ntBASIC6.48□□□□□ -1.37
SCUBE3Q8IX30 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC6.48□□□□□ -1.37
SCUBE3Q8IX30 STX3-204ENST00000530221 534 ntTSL 5 BASIC6.48□□□□□ -1.37
SCUBE3Q8IX30 AC063949.1-201ENST00000552900 865 ntBASIC6.48□□□□□ -1.37
SCUBE3Q8IX30 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC6.48□□□□□ -1.37
SCUBE3Q8IX30 AC127024.4-201ENST00000585212 308 ntTSL 5 BASIC6.48□□□□□ -1.37
SCUBE3Q8IX30 MNS1-201ENST00000260453 2023 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
SCUBE3Q8IX30 LINC00326-202ENST00000457339 2515 ntTSL 5 BASIC6.48□□□□□ -1.37
SCUBE3Q8IX30 ZNF177-202ENST00000589262 1920 ntAPPRIS ALT2 TSL 2 BASIC6.48□□□□□ -1.37
SCUBE3Q8IX30 OR2A12-202ENST00000641592 4163 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
SCUBE3Q8IX30 GTF2H5-201ENST00000607778 7481 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
SCUBE3Q8IX30 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
SCUBE3Q8IX30 CHD2-215ENST00000628375 3202 ntTSL 5 BASIC6.48□□□□□ -1.37
SCUBE3Q8IX30 KLHL41-201ENST00000284669 2464 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
SCUBE3Q8IX30 AL606516.1-201ENST00000455438 1861 ntTSL 2 BASIC6.47□□□□□ -1.37
SCUBE3Q8IX30 WASHC4-214ENST00000620430 5807 ntAPPRIS ALT1 TSL 1 (best) BASIC6.47□□□□□ -1.37
SCUBE3Q8IX30 AC022325.1-201ENST00000502748 2199 ntBASIC6.47□□□□□ -1.37
SCUBE3Q8IX30 LINC01179-201ENST00000507838 2163 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
SCUBE3Q8IX30 PRKDC-201ENST00000314191 13509 ntAPPRIS P4 TSL 1 (best) BASIC6.47□□□□□ -1.37
SCUBE3Q8IX30 SHQ1P1-201ENST00000437111 1544 ntBASIC6.47□□□□□ -1.37
SCUBE3Q8IX30 UNC79-203ENST00000553484 9100 ntTSL 5 BASIC6.47□□□□□ -1.37
SCUBE3Q8IX30 MKL2-202ENST00000571589 8799 ntAPPRIS ALT2 TSL 2 BASIC6.47□□□□□ -1.37
SCUBE3Q8IX30 FAM162A-201ENST00000232125 801 ntTSL 2 BASIC6.47□□□□□ -1.37
SCUBE3Q8IX30 TNP1-201ENST00000236979 407 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
SCUBE3Q8IX30 RNA5SP375-201ENST00000362975 119 ntBASIC6.47□□□□□ -1.37
SCUBE3Q8IX30 RNU6-704P-201ENST00000364162 103 ntBASIC6.47□□□□□ -1.37
SCUBE3Q8IX30 Y_RNA.277-201ENST00000364754 102 ntBASIC6.47□□□□□ -1.37
SCUBE3Q8IX30 RNU6-493P-201ENST00000391321 108 ntBASIC6.47□□□□□ -1.37
SCUBE3Q8IX30 RNA5SP178-201ENST00000410380 128 ntBASIC6.47□□□□□ -1.37
SCUBE3Q8IX30 RNU6-174P-201ENST00000410406 106 ntBASIC6.47□□□□□ -1.37
SCUBE3Q8IX30 RNA5SP111-201ENST00000411386 101 ntBASIC6.47□□□□□ -1.37
SCUBE3Q8IX30 EEF1A1P29-201ENST00000416082 1096 ntBASIC6.47□□□□□ -1.37
SCUBE3Q8IX30 LINC00310-202ENST00000419881 910 ntTSL 5 BASIC6.47□□□□□ -1.37
SCUBE3Q8IX30 CEACAMP6-201ENST00000452007 574 ntBASIC6.47□□□□□ -1.37
SCUBE3Q8IX30 AL136097.1-201ENST00000456945 913 ntBASIC6.47□□□□□ -1.37
SCUBE3Q8IX30 RPS27AP1-201ENST00000475545 471 ntBASIC6.47□□□□□ -1.37
SCUBE3Q8IX30 IGKV1OR2-1-201ENST00000514060 354 ntBASIC6.47□□□□□ -1.37
SCUBE3Q8IX30 Y_RNA.683-201ENST00000516508 93 ntBASIC6.47□□□□□ -1.37
SCUBE3Q8IX30 AC027308.1-201ENST00000517993 110 ntBASIC6.47□□□□□ -1.37
SCUBE3Q8IX30 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC6.47□□□□□ -1.37
SCUBE3Q8IX30 AC010325.1-202ENST00000562076 279 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
SCUBE3Q8IX30 MIR4504-201ENST00000577413 92 ntBASIC6.47□□□□□ -1.37
SCUBE3Q8IX30 IGKV1OR2-118-201ENST00000603238 347 ntBASIC6.47□□□□□ -1.37
SCUBE3Q8IX30 AC141002.1-201ENST00000607025 279 ntBASIC6.47□□□□□ -1.37
SCUBE3Q8IX30 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC6.47□□□□□ -1.37
SCUBE3Q8IX30 LRRC7-202ENST00000310961 6507 ntAPPRIS ALT2 TSL 5 BASIC6.47□□□□□ -1.37
SCUBE3Q8IX30 AC011933.2-201ENST00000578539 2790 ntBASIC6.47□□□□□ -1.37
SCUBE3Q8IX30 ZNF112-201ENST00000337401 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
SCUBE3Q8IX30 IL23R-201ENST00000347310 2912 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
SCUBE3Q8IX30 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
SCUBE3Q8IX30 CACNB4-234ENST00000636785 3787 ntTSL 5 BASIC6.47□□□□□ -1.37
SCUBE3Q8IX30 ZNF532-201ENST00000336078 6696 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
SCUBE3Q8IX30 TOR1AIP2-201ENST00000367612 7905 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
SCUBE3Q8IX30 TEX9-209ENST00000561221 2297 ntTSL 5 BASIC6.47□□□□□ -1.37
SCUBE3Q8IX30 SLC35A5-201ENST00000261034 2444 ntTSL 5 BASIC6.47□□□□□ -1.37
SCUBE3Q8IX30 ZNF112-202ENST00000354340 3654 ntAPPRIS P3 TSL 1 (best) BASIC6.47□□□□□ -1.37
SCUBE3Q8IX30 UTP15-208ENST00000543251 4922 ntTSL 2 BASIC6.47□□□□□ -1.37
SCUBE3Q8IX30 CNTN1-204ENST00000547849 3125 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
SCUBE3Q8IX30 IFI16-202ENST00000340979 2732 ntTSL 5 BASIC6.47□□□□□ -1.37
SCUBE3Q8IX30 DCTN5-201ENST00000300087 11011 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
SCUBE3Q8IX30 IFIT2-201ENST00000371826 3489 ntAPPRIS P2 TSL 1 (best) BASIC6.46□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 114 ms