Protein–RNA interactions for Protein: Q8IWP9

CCDC28A, Coiled-coil domain-containing protein 28A, humanhuman

Predictions only

Length 274 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28AQ8IWP9 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
CCDC28AQ8IWP9 CRYAB-201ENST00000227251 848 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
CCDC28AQ8IWP9 RNU6-637P-201ENST00000384050 107 ntBASIC4.08□□□□□ -1.76
CCDC28AQ8IWP9 RNU6-516P-201ENST00000411381 104 ntBASIC4.08□□□□□ -1.76
CCDC28AQ8IWP9 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC4.08□□□□□ -1.76
CCDC28AQ8IWP9 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC4.08□□□□□ -1.76
CCDC28AQ8IWP9 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC4.08□□□□□ -1.76
CCDC28AQ8IWP9 BX295541.1-201ENST00000417774 250 ntBASIC4.08□□□□□ -1.76
CCDC28AQ8IWP9 RPL34P3-201ENST00000421454 338 ntBASIC4.08□□□□□ -1.76
CCDC28AQ8IWP9 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC4.08□□□□□ -1.76
CCDC28AQ8IWP9 USP9YP36-201ENST00000424581 829 ntBASIC4.08□□□□□ -1.76
CCDC28AQ8IWP9 BX323845.3-201ENST00000428215 527 ntBASIC4.08□□□□□ -1.76
CCDC28AQ8IWP9 GCA-203ENST00000429691 824 ntTSL 3 BASIC4.08□□□□□ -1.76
CCDC28AQ8IWP9 AC119618.1-201ENST00000434191 222 ntBASIC4.08□□□□□ -1.76
CCDC28AQ8IWP9 TIMM9P1-201ENST00000436122 256 ntBASIC4.08□□□□□ -1.76
CCDC28AQ8IWP9 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC4.08□□□□□ -1.76
CCDC28AQ8IWP9 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC4.08□□□□□ -1.76
CCDC28AQ8IWP9 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC4.08□□□□□ -1.76
CCDC28AQ8IWP9 MTND1P12-201ENST00000455231 147 ntBASIC4.08□□□□□ -1.76
CCDC28AQ8IWP9 OFD1P4Y-201ENST00000455273 1179 ntBASIC4.08□□□□□ -1.76
CCDC28AQ8IWP9 AC011476.1-201ENST00000466725 307 ntBASIC4.08□□□□□ -1.76
CCDC28AQ8IWP9 AC094085.1-201ENST00000468914 584 ntBASIC4.08□□□□□ -1.76
CCDC28AQ8IWP9 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC4.08□□□□□ -1.76
CCDC28AQ8IWP9 RBM43P1-201ENST00000476891 1081 ntBASIC4.08□□□□□ -1.76
CCDC28AQ8IWP9 RPL37P23-201ENST00000492641 294 ntBASIC4.08□□□□□ -1.76
CCDC28AQ8IWP9 RN7SL101P-201ENST00000496350 279 ntBASIC4.08□□□□□ -1.76
CCDC28AQ8IWP9 AC010587.1-201ENST00000505809 469 ntBASIC4.08□□□□□ -1.76
CCDC28AQ8IWP9 GTF2F2P1-201ENST00000511083 675 ntBASIC4.08□□□□□ -1.76
CCDC28AQ8IWP9 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC4.08□□□□□ -1.76
CCDC28AQ8IWP9 CDV3-208ENST00000511392 554 ntTSL 5 BASIC4.08□□□□□ -1.76
CCDC28AQ8IWP9 RNU6-615P-201ENST00000516065 106 ntBASIC4.08□□□□□ -1.76
CCDC28AQ8IWP9 HMGN1P28-201ENST00000521340 364 ntBASIC4.08□□□□□ -1.76
CCDC28AQ8IWP9 AP000873.2-204ENST00000530825 375 ntTSL 3 BASIC4.08□□□□□ -1.76
CCDC28AQ8IWP9 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC4.08□□□□□ -1.76
CCDC28AQ8IWP9 AC016957.1-201ENST00000534895 309 ntBASIC4.08□□□□□ -1.76
CCDC28AQ8IWP9 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC4.08□□□□□ -1.76
CCDC28AQ8IWP9 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC4.08□□□□□ -1.76
CCDC28AQ8IWP9 HAUS8P1-201ENST00000549005 542 ntBASIC4.08□□□□□ -1.76
CCDC28AQ8IWP9 PCNPP1-201ENST00000552501 511 ntBASIC4.08□□□□□ -1.76
CCDC28AQ8IWP9 AL049875.1-201ENST00000554328 582 ntTSL 4 BASIC4.08□□□□□ -1.76
CCDC28AQ8IWP9 AC007424.1-203ENST00000554613 687 ntBASIC4.08□□□□□ -1.76
CCDC28AQ8IWP9 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC4.08□□□□□ -1.76
CCDC28AQ8IWP9 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC4.08□□□□□ -1.76
CCDC28AQ8IWP9 AC027808.1-201ENST00000560873 683 ntTSL 3 BASIC4.08□□□□□ -1.76
CCDC28AQ8IWP9 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC4.08□□□□□ -1.76
CCDC28AQ8IWP9 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC4.08□□□□□ -1.76
CCDC28AQ8IWP9 RN7SL708P-201ENST00000580952 299 ntBASIC4.08□□□□□ -1.76
CCDC28AQ8IWP9 VN1R79P-201ENST00000593540 513 ntBASIC4.08□□□□□ -1.76
CCDC28AQ8IWP9 SNRPGP15-201ENST00000600149 222 ntBASIC4.08□□□□□ -1.76
CCDC28AQ8IWP9 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC4.08□□□□□ -1.76
CCDC28AQ8IWP9 AC090527.3-201ENST00000619041 548 ntBASIC4.08□□□□□ -1.76
CCDC28AQ8IWP9 MIR6130-201ENST00000619419 109 ntBASIC4.08□□□□□ -1.76
CCDC28AQ8IWP9 AC136475.10-201ENST00000620253 385 ntBASIC4.08□□□□□ -1.76
CCDC28AQ8IWP9 AL732618.1-201ENST00000623251 301 ntBASIC4.08□□□□□ -1.76
CCDC28AQ8IWP9 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
CCDC28AQ8IWP9 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
CCDC28AQ8IWP9 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
CCDC28AQ8IWP9 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC4.08□□□□□ -1.76
CCDC28AQ8IWP9 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC4.08□□□□□ -1.76
CCDC28AQ8IWP9 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
CCDC28AQ8IWP9 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC4.07□□□□□ -1.76
CCDC28AQ8IWP9 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC4.07□□□□□ -1.76
CCDC28AQ8IWP9 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
CCDC28AQ8IWP9 OR52B3P-201ENST00000314715 928 ntBASIC4.07□□□□□ -1.76
CCDC28AQ8IWP9 RNU5E-1-201ENST00000362477 120 ntBASIC4.07□□□□□ -1.76
CCDC28AQ8IWP9 RNY4P16-201ENST00000364768 94 ntBASIC4.07□□□□□ -1.76
CCDC28AQ8IWP9 RN7SKP226-201ENST00000364912 300 ntBASIC4.07□□□□□ -1.76
CCDC28AQ8IWP9 RNA5SP131-201ENST00000365452 119 ntBASIC4.07□□□□□ -1.76
CCDC28AQ8IWP9 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
CCDC28AQ8IWP9 RNU6-432P-201ENST00000384196 109 ntBASIC4.07□□□□□ -1.76
CCDC28AQ8IWP9 SNORD3H-201ENST00000384486 214 ntBASIC4.07□□□□□ -1.76
CCDC28AQ8IWP9 MIR135A2-201ENST00000384854 100 ntBASIC4.07□□□□□ -1.76
CCDC28AQ8IWP9 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC4.07□□□□□ -1.76
CCDC28AQ8IWP9 AC005323.2-201ENST00000399342 583 ntTSL 3 BASIC4.07□□□□□ -1.76
CCDC28AQ8IWP9 MIR921-201ENST00000401133 56 ntBASIC4.07□□□□□ -1.76
CCDC28AQ8IWP9 AL357515.1-201ENST00000402967 542 ntBASIC4.07□□□□□ -1.76
CCDC28AQ8IWP9 RN7SKP240-201ENST00000410583 375 ntBASIC4.07□□□□□ -1.76
CCDC28AQ8IWP9 AC127391.1-201ENST00000411737 98 ntBASIC4.07□□□□□ -1.76
CCDC28AQ8IWP9 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC4.07□□□□□ -1.76
CCDC28AQ8IWP9 RAD23BP2-201ENST00000416003 1207 ntBASIC4.07□□□□□ -1.76
CCDC28AQ8IWP9 LINC01203-201ENST00000419566 580 ntTSL 2 BASIC4.07□□□□□ -1.76
CCDC28AQ8IWP9 PIGFP2-201ENST00000421400 651 ntBASIC4.07□□□□□ -1.76
CCDC28AQ8IWP9 TEX41-204ENST00000423031 491 ntTSL 4 BASIC4.07□□□□□ -1.76
CCDC28AQ8IWP9 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC4.07□□□□□ -1.76
CCDC28AQ8IWP9 AC019097.1-201ENST00000424783 735 ntBASIC4.07□□□□□ -1.76
CCDC28AQ8IWP9 MTCO3P30-201ENST00000426425 670 ntBASIC4.07□□□□□ -1.76
CCDC28AQ8IWP9 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC4.07□□□□□ -1.76
CCDC28AQ8IWP9 AC068631.1-204ENST00000428501 534 ntTSL 3 BASIC4.07□□□□□ -1.76
CCDC28AQ8IWP9 AC009238.2-201ENST00000431026 355 ntBASIC4.07□□□□□ -1.76
CCDC28AQ8IWP9 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC4.07□□□□□ -1.76
CCDC28AQ8IWP9 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC4.07□□□□□ -1.76
CCDC28AQ8IWP9 HMGN2P21-201ENST00000447764 270 ntBASIC4.07□□□□□ -1.76
CCDC28AQ8IWP9 AL136380.1-201ENST00000447970 162 ntBASIC4.07□□□□□ -1.76
CCDC28AQ8IWP9 NDUFAF4P4-201ENST00000454883 502 ntBASIC4.07□□□□□ -1.76
CCDC28AQ8IWP9 AC007967.1-201ENST00000455422 1159 ntBASIC4.07□□□□□ -1.76
CCDC28AQ8IWP9 AL359385.1-201ENST00000456509 365 ntBASIC4.07□□□□□ -1.76
CCDC28AQ8IWP9 RNU7-59P-201ENST00000459101 61 ntBASIC4.07□□□□□ -1.76
CCDC28AQ8IWP9 MTCO2P29-201ENST00000465212 189 ntBASIC4.07□□□□□ -1.76
CCDC28AQ8IWP9 VN1R5-201ENST00000472952 1239 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
CCDC28AQ8IWP9 AC092754.1-201ENST00000472975 479 ntBASIC4.07□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 96.2 ms