Protein–RNA interactions for Protein: Q8IVD9

NUDCD3, NudC domain-containing protein 3, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3Q8IVD9 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC3.22□□□□□ -1.89
NUDCD3Q8IVD9 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC3.22□□□□□ -1.89
NUDCD3Q8IVD9 CXXC1P1-203ENST00000589302 746 ntTSL 3 BASIC3.22□□□□□ -1.89
NUDCD3Q8IVD9 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC3.22□□□□□ -1.89
NUDCD3Q8IVD9 AL109653.1-201ENST00000603091 248 ntBASIC3.22□□□□□ -1.89
NUDCD3Q8IVD9 AL451086.1-201ENST00000605596 223 ntBASIC3.22□□□□□ -1.89
NUDCD3Q8IVD9 AL158211.2-201ENST00000607282 395 ntBASIC3.22□□□□□ -1.89
NUDCD3Q8IVD9 AC078880.5-201ENST00000617845 421 ntBASIC3.22□□□□□ -1.89
NUDCD3Q8IVD9 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC3.22□□□□□ -1.89
NUDCD3Q8IVD9 AC098679.5-201ENST00000624394 571 ntBASIC3.22□□□□□ -1.89
NUDCD3Q8IVD9 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.22□□□□□ -1.89
NUDCD3Q8IVD9 AL356274.2-201ENST00000624379 3752 ntBASIC3.22□□□□□ -1.89
NUDCD3Q8IVD9 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.22□□□□□ -1.89
NUDCD3Q8IVD9 AL136164.4-201ENST00000625013 2135 ntBASIC3.22□□□□□ -1.89
NUDCD3Q8IVD9 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC3.22□□□□□ -1.89
NUDCD3Q8IVD9 AL355578.1-201ENST00000607405 1328 ntBASIC3.21□□□□□ -1.89
NUDCD3Q8IVD9 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.89
NUDCD3Q8IVD9 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC3.21□□□□□ -1.9
NUDCD3Q8IVD9 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
NUDCD3Q8IVD9 RNU6-263P-201ENST00000363811 107 ntBASIC3.21□□□□□ -1.9
NUDCD3Q8IVD9 RNU6-619P-201ENST00000365146 108 ntBASIC3.21□□□□□ -1.9
NUDCD3Q8IVD9 OR1L1-202ENST00000373686 1083 ntBASIC3.21□□□□□ -1.9
NUDCD3Q8IVD9 SNORA46-201ENST00000384762 135 ntBASIC3.21□□□□□ -1.9
NUDCD3Q8IVD9 RPL21P17-201ENST00000397467 475 ntBASIC3.21□□□□□ -1.9
NUDCD3Q8IVD9 OFD1P18Y-201ENST00000420889 959 ntBASIC3.21□□□□□ -1.9
NUDCD3Q8IVD9 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC3.21□□□□□ -1.9
NUDCD3Q8IVD9 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC3.21□□□□□ -1.9
NUDCD3Q8IVD9 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC3.21□□□□□ -1.9
NUDCD3Q8IVD9 RN7SL75P-201ENST00000461926 281 ntBASIC3.21□□□□□ -1.9
NUDCD3Q8IVD9 XACT-201ENST00000468762 497 ntTSL 5 BASIC3.21□□□□□ -1.9
NUDCD3Q8IVD9 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
NUDCD3Q8IVD9 SYPL1P1-201ENST00000473622 768 ntBASIC3.21□□□□□ -1.9
NUDCD3Q8IVD9 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC3.21□□□□□ -1.9
NUDCD3Q8IVD9 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC3.21□□□□□ -1.9
NUDCD3Q8IVD9 AC109471.1-201ENST00000511631 612 ntBASIC3.21□□□□□ -1.9
NUDCD3Q8IVD9 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC3.21□□□□□ -1.9
NUDCD3Q8IVD9 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC3.21□□□□□ -1.9
NUDCD3Q8IVD9 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
NUDCD3Q8IVD9 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC3.21□□□□□ -1.9
NUDCD3Q8IVD9 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
NUDCD3Q8IVD9 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC3.21□□□□□ -1.9
NUDCD3Q8IVD9 AC074051.3-201ENST00000570238 358 ntBASIC3.21□□□□□ -1.9
NUDCD3Q8IVD9 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC3.21□□□□□ -1.9
NUDCD3Q8IVD9 AL020997.2-201ENST00000602607 184 ntBASIC3.21□□□□□ -1.9
NUDCD3Q8IVD9 AC113368.1-201ENST00000603736 382 ntBASIC3.21□□□□□ -1.9
NUDCD3Q8IVD9 IGHV3-29-201ENST00000604817 344 ntBASIC3.21□□□□□ -1.9
NUDCD3Q8IVD9 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC3.21□□□□□ -1.9
NUDCD3Q8IVD9 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC3.21□□□□□ -1.9
NUDCD3Q8IVD9 BX649567.1-201ENST00000642071 1134 ntBASIC3.21□□□□□ -1.9
NUDCD3Q8IVD9 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.21□□□□□ -1.9
NUDCD3Q8IVD9 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
NUDCD3Q8IVD9 AC093831.2-201ENST00000624393 3427 ntBASIC3.21□□□□□ -1.9
NUDCD3Q8IVD9 AC117529.2-201ENST00000512159 2068 ntBASIC3.21□□□□□ -1.9
NUDCD3Q8IVD9 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC3.21□□□□□ -1.9
NUDCD3Q8IVD9 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC3.21□□□□□ -1.9
NUDCD3Q8IVD9 ZNF734P-201ENST00000419494 1534 ntBASIC3.2□□□□□ -1.9
NUDCD3Q8IVD9 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
NUDCD3Q8IVD9 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
NUDCD3Q8IVD9 ESD-201ENST00000378697 1079 ntTSL 5 BASIC3.2□□□□□ -1.9
NUDCD3Q8IVD9 Y_RNA.493-201ENST00000384422 102 ntBASIC3.2□□□□□ -1.9
NUDCD3Q8IVD9 MT-TC-201ENST00000387405 66 ntBASIC3.2□□□□□ -1.9
NUDCD3Q8IVD9 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.2□□□□□ -1.9
NUDCD3Q8IVD9 RNA5SP229-201ENST00000410809 99 ntBASIC3.2□□□□□ -1.9
NUDCD3Q8IVD9 AC245054.2-201ENST00000415639 319 ntBASIC3.2□□□□□ -1.9
NUDCD3Q8IVD9 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC3.2□□□□□ -1.9
NUDCD3Q8IVD9 OR2AS1P-201ENST00000427827 319 ntBASIC3.2□□□□□ -1.9
NUDCD3Q8IVD9 RPL23AP69-201ENST00000431134 458 ntBASIC3.2□□□□□ -1.9
NUDCD3Q8IVD9 AC009969.1-201ENST00000438726 172 ntBASIC3.2□□□□□ -1.9
NUDCD3Q8IVD9 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC3.2□□□□□ -1.9
NUDCD3Q8IVD9 ATP5C1P1-201ENST00000441945 895 ntBASIC3.2□□□□□ -1.9
NUDCD3Q8IVD9 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC3.2□□□□□ -1.9
NUDCD3Q8IVD9 UQCRHP3-201ENST00000451503 251 ntBASIC3.2□□□□□ -1.9
NUDCD3Q8IVD9 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC3.2□□□□□ -1.9
NUDCD3Q8IVD9 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC3.2□□□□□ -1.9
NUDCD3Q8IVD9 RPL21P104-201ENST00000464143 478 ntBASIC3.2□□□□□ -1.9
NUDCD3Q8IVD9 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC3.2□□□□□ -1.9
NUDCD3Q8IVD9 RN7SL283P-201ENST00000489055 303 ntBASIC3.2□□□□□ -1.9
NUDCD3Q8IVD9 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC3.2□□□□□ -1.9
NUDCD3Q8IVD9 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
NUDCD3Q8IVD9 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC3.2□□□□□ -1.9
NUDCD3Q8IVD9 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC3.2□□□□□ -1.9
NUDCD3Q8IVD9 MTCO3P44-201ENST00000510977 541 ntBASIC3.2□□□□□ -1.9
NUDCD3Q8IVD9 RN7SKP13-201ENST00000515933 244 ntBASIC3.2□□□□□ -1.9
NUDCD3Q8IVD9 PTK2-220ENST00000520151 573 ntTSL 4 BASIC3.2□□□□□ -1.9
NUDCD3Q8IVD9 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC3.2□□□□□ -1.9
NUDCD3Q8IVD9 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC3.2□□□□□ -1.9
NUDCD3Q8IVD9 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC3.2□□□□□ -1.9
NUDCD3Q8IVD9 AP004371.1-201ENST00000525240 214 ntBASIC3.2□□□□□ -1.9
NUDCD3Q8IVD9 MS4A1-205ENST00000528313 928 ntTSL 2 BASIC3.2□□□□□ -1.9
NUDCD3Q8IVD9 OR4R2P-201ENST00000530815 597 ntBASIC3.2□□□□□ -1.9
NUDCD3Q8IVD9 AC109635.4-202ENST00000531666 412 ntBASIC3.2□□□□□ -1.9
NUDCD3Q8IVD9 AC079035.1-201ENST00000551713 848 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
NUDCD3Q8IVD9 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC3.2□□□□□ -1.9
NUDCD3Q8IVD9 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC3.2□□□□□ -1.9
NUDCD3Q8IVD9 AL133393.1-201ENST00000603277 287 ntBASIC3.2□□□□□ -1.9
NUDCD3Q8IVD9 AC025588.3-201ENST00000604182 274 ntBASIC3.2□□□□□ -1.9
NUDCD3Q8IVD9 AL590426.2-201ENST00000607287 786 ntTSL 3 BASIC3.2□□□□□ -1.9
NUDCD3Q8IVD9 AC092354.2-201ENST00000607786 514 ntBASIC3.2□□□□□ -1.9
NUDCD3Q8IVD9 AL451074.6-201ENST00000608512 729 ntBASIC3.2□□□□□ -1.9
NUDCD3Q8IVD9 AL354976.1-201ENST00000613843 387 ntBASIC3.2□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 83.1 ms