Protein–RNA interactions for Protein: Q86U70

LDB1, LIM domain-binding protein 1, humanhuman

Predicted RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1Q86U70 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC3.84□□□□□ -1.79
LDB1Q86U70 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC3.84□□□□□ -1.8
LDB1Q86U70 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC3.84□□□□□ -1.8
LDB1Q86U70 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
LDB1Q86U70 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
LDB1Q86U70 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
LDB1Q86U70 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC3.83□□□□□ -1.8
LDB1Q86U70 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
LDB1Q86U70 RNU6-263P-201ENST00000363811 107 ntBASIC3.83□□□□□ -1.8
LDB1Q86U70 RNU6-837P-201ENST00000391056 108 ntBASIC3.83□□□□□ -1.8
LDB1Q86U70 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC3.83□□□□□ -1.8
LDB1Q86U70 LINC01468-201ENST00000422763 570 ntTSL 3 BASIC3.83□□□□□ -1.8
LDB1Q86U70 AC092832.1-201ENST00000422934 400 ntBASIC3.83□□□□□ -1.8
LDB1Q86U70 AL953862.1-201ENST00000423016 168 ntBASIC3.83□□□□□ -1.8
LDB1Q86U70 GLRXP1-201ENST00000423261 334 ntBASIC3.83□□□□□ -1.8
LDB1Q86U70 OR8F1P-201ENST00000425243 930 ntBASIC3.83□□□□□ -1.8
LDB1Q86U70 USP9YP7-201ENST00000436723 430 ntBASIC3.83□□□□□ -1.8
LDB1Q86U70 YWHAZP7-201ENST00000436906 631 ntBASIC3.83□□□□□ -1.8
LDB1Q86U70 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC3.83□□□□□ -1.8
LDB1Q86U70 RPL21P133-201ENST00000443666 476 ntBASIC3.83□□□□□ -1.8
LDB1Q86U70 AL500522.2-201ENST00000448562 343 ntBASIC3.83□□□□□ -1.8
LDB1Q86U70 AC104978.1-201ENST00000449387 391 ntBASIC3.83□□□□□ -1.8
LDB1Q86U70 USP9YP32-201ENST00000452432 430 ntBASIC3.83□□□□□ -1.8
LDB1Q86U70 USP9YP10-201ENST00000454868 628 ntBASIC3.83□□□□□ -1.8
LDB1Q86U70 AL109741.2-201ENST00000455561 343 ntBASIC3.83□□□□□ -1.8
LDB1Q86U70 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC3.83□□□□□ -1.8
LDB1Q86U70 TRBV12-2-201ENST00000489763 344 ntBASIC3.83□□□□□ -1.8
LDB1Q86U70 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC3.83□□□□□ -1.8
LDB1Q86U70 RAC1P2-201ENST00000511164 579 ntBASIC3.83□□□□□ -1.8
LDB1Q86U70 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC3.83□□□□□ -1.8
LDB1Q86U70 USP9YP5-201ENST00000511770 630 ntBASIC3.83□□□□□ -1.8
LDB1Q86U70 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC3.83□□□□□ -1.8
LDB1Q86U70 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC3.83□□□□□ -1.8
LDB1Q86U70 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
LDB1Q86U70 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC3.83□□□□□ -1.8
LDB1Q86U70 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC3.83□□□□□ -1.8
LDB1Q86U70 ZNF321P-202ENST00000550843 495 ntBASIC3.83□□□□□ -1.8
LDB1Q86U70 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC3.83□□□□□ -1.8
LDB1Q86U70 DUXAP6-201ENST00000553858 601 ntBASIC3.83□□□□□ -1.8
LDB1Q86U70 CYCSP2-201ENST00000558168 301 ntBASIC3.83□□□□□ -1.8
LDB1Q86U70 AC090616.5-202ENST00000582111 297 ntBASIC3.83□□□□□ -1.8
LDB1Q86U70 NIFKP6-201ENST00000598115 845 ntBASIC3.83□□□□□ -1.8
LDB1Q86U70 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC3.83□□□□□ -1.8
LDB1Q86U70 IGKV1OR2-118-201ENST00000603238 347 ntBASIC3.83□□□□□ -1.8
LDB1Q86U70 AL606490.9-201ENST00000603331 271 ntBASIC3.83□□□□□ -1.8
LDB1Q86U70 BRDTP1-201ENST00000605735 677 ntBASIC3.83□□□□□ -1.8
LDB1Q86U70 HMGN2P28-201ENST00000606102 262 ntBASIC3.83□□□□□ -1.8
LDB1Q86U70 AL139418.1-201ENST00000613613 177 ntBASIC3.83□□□□□ -1.8
LDB1Q86U70 MIR6875-201ENST00000617506 72 ntBASIC3.83□□□□□ -1.8
LDB1Q86U70 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
LDB1Q86U70 AC068724.3-201ENST00000625906 87 ntBASIC3.83□□□□□ -1.8
LDB1Q86U70 AL136084.2-203ENST00000630758 690 ntTSL 5 BASIC3.83□□□□□ -1.8
LDB1Q86U70 MTND2P41-201ENST00000637599 773 ntBASIC3.83□□□□□ -1.8
LDB1Q86U70 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
LDB1Q86U70 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
LDB1Q86U70 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC3.82□□□□□ -1.8
LDB1Q86U70 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
LDB1Q86U70 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC3.82□□□□□ -1.8
LDB1Q86U70 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC3.82□□□□□ -1.8
LDB1Q86U70 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC3.82□□□□□ -1.8
LDB1Q86U70 OR4G11P-202ENST00000642116 1414 ntBASIC3.82□□□□□ -1.8
LDB1Q86U70 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC3.82□□□□□ -1.8
LDB1Q86U70 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
LDB1Q86U70 ZNF542P-204ENST00000482727 1305 ntBASIC3.82□□□□□ -1.8
LDB1Q86U70 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
LDB1Q86U70 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
LDB1Q86U70 RNU6-989P-201ENST00000362756 107 ntBASIC3.82□□□□□ -1.8
LDB1Q86U70 SNORA4.1-201ENST00000364263 144 ntBASIC3.82□□□□□ -1.8
LDB1Q86U70 RNU6-821P-201ENST00000390995 107 ntBASIC3.82□□□□□ -1.8
LDB1Q86U70 U3.29-201ENST00000391296 212 ntBASIC3.82□□□□□ -1.8
LDB1Q86U70 PDC-201ENST00000391997 1242 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
LDB1Q86U70 RNU4-78P-201ENST00000410940 126 ntBASIC3.82□□□□□ -1.8
LDB1Q86U70 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC3.82□□□□□ -1.8
LDB1Q86U70 GCG-202ENST00000418842 1289 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
LDB1Q86U70 SNORA71B-202ENST00000439232 272 ntBASIC3.82□□□□□ -1.8
LDB1Q86U70 RPL21P89-201ENST00000444021 467 ntBASIC3.82□□□□□ -1.8
LDB1Q86U70 ARPC3P5-201ENST00000448802 534 ntBASIC3.82□□□□□ -1.8
LDB1Q86U70 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC3.82□□□□□ -1.8
LDB1Q86U70 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC3.82□□□□□ -1.8
LDB1Q86U70 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC3.82□□□□□ -1.8
LDB1Q86U70 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC3.82□□□□□ -1.8
LDB1Q86U70 HMGB3P30-201ENST00000457863 606 ntBASIC3.82□□□□□ -1.8
LDB1Q86U70 RPL21P11-201ENST00000461458 483 ntBASIC3.82□□□□□ -1.8
LDB1Q86U70 AC087312.1-201ENST00000471411 480 ntBASIC3.82□□□□□ -1.8
LDB1Q86U70 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
LDB1Q86U70 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
LDB1Q86U70 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC3.82□□□□□ -1.8
LDB1Q86U70 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC3.82□□□□□ -1.8
LDB1Q86U70 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC3.82□□□□□ -1.8
LDB1Q86U70 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC3.82□□□□□ -1.8
LDB1Q86U70 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC3.82□□□□□ -1.8
LDB1Q86U70 AC009101.1-201ENST00000568135 242 ntBASIC3.82□□□□□ -1.8
LDB1Q86U70 MIR4644-201ENST00000579929 84 ntBASIC3.82□□□□□ -1.8
LDB1Q86U70 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC3.82□□□□□ -1.8
LDB1Q86U70 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC3.82□□□□□ -1.8
LDB1Q86U70 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC3.82□□□□□ -1.8
LDB1Q86U70 ELOCP35-201ENST00000604289 336 ntBASIC3.82□□□□□ -1.8
LDB1Q86U70 AC006329.2-201ENST00000611491 394 ntBASIC3.82□□□□□ -1.8
LDB1Q86U70 AL136981.2-201ENST00000617319 734 ntBASIC3.82□□□□□ -1.8
LDB1Q86U70 AC068831.8-201ENST00000620171 435 ntBASIC3.82□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 97.7 ms