Protein–RNA interactions for Protein: Q7Z6J8

UBE3D, E3 ubiquitin-protein ligase E3D, humanhuman

Predictions only

Length 389 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3DQ7Z6J8 AL136372.1-201ENST00000403060 228 ntBASIC5.22□□□□□ -1.57
UBE3DQ7Z6J8 RNU4-46P-201ENST00000410818 138 ntBASIC5.22□□□□□ -1.57
UBE3DQ7Z6J8 VDAC1P9-201ENST00000412766 841 ntBASIC5.22□□□□□ -1.57
UBE3DQ7Z6J8 AL591848.1-201ENST00000413092 322 ntBASIC5.22□□□□□ -1.57
UBE3DQ7Z6J8 ZDHHC20P1-204ENST00000435787 423 ntBASIC5.22□□□□□ -1.57
UBE3DQ7Z6J8 CYCSP51-201ENST00000443545 318 ntBASIC5.22□□□□□ -1.57
UBE3DQ7Z6J8 YWHAEP1-201ENST00000453697 763 ntBASIC5.22□□□□□ -1.57
UBE3DQ7Z6J8 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC5.22□□□□□ -1.57
UBE3DQ7Z6J8 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC5.22□□□□□ -1.57
UBE3DQ7Z6J8 AC020893.1-201ENST00000502452 580 ntBASIC5.22□□□□□ -1.57
UBE3DQ7Z6J8 RFPL4AP5-201ENST00000514977 504 ntBASIC5.22□□□□□ -1.57
UBE3DQ7Z6J8 RN7SKP24-201ENST00000515888 284 ntBASIC5.22□□□□□ -1.57
UBE3DQ7Z6J8 CARD16-203ENST00000525374 503 ntTSL 3 BASIC5.22□□□□□ -1.57
UBE3DQ7Z6J8 AC109635.4-202ENST00000531666 412 ntBASIC5.22□□□□□ -1.57
UBE3DQ7Z6J8 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC5.22□□□□□ -1.57
UBE3DQ7Z6J8 RN7SL802P-201ENST00000577858 299 ntBASIC5.22□□□□□ -1.57
UBE3DQ7Z6J8 MIR4503-201ENST00000582187 83 ntBASIC5.22□□□□□ -1.57
UBE3DQ7Z6J8 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC5.22□□□□□ -1.57
UBE3DQ7Z6J8 AC007938.3-201ENST00000604965 623 ntBASIC5.22□□□□□ -1.57
UBE3DQ7Z6J8 AL160400.1-201ENST00000606385 1030 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
UBE3DQ7Z6J8 AL008729.2-201ENST00000606393 473 ntBASIC5.22□□□□□ -1.57
UBE3DQ7Z6J8 AC022893.3-201ENST00000607665 437 ntBASIC5.22□□□□□ -1.57
UBE3DQ7Z6J8 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC5.22□□□□□ -1.57
UBE3DQ7Z6J8 AL049794.2-201ENST00000616301 365 ntBASIC5.22□□□□□ -1.57
UBE3DQ7Z6J8 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC5.22□□□□□ -1.57
UBE3DQ7Z6J8 AC007792.1-201ENST00000623023 402 ntBASIC5.22□□□□□ -1.57
UBE3DQ7Z6J8 AC011155.2-201ENST00000623202 216 ntBASIC5.22□□□□□ -1.57
UBE3DQ7Z6J8 AC055839.1-201ENST00000634467 498 ntBASIC5.22□□□□□ -1.57
UBE3DQ7Z6J8 AC073869.8-201ENST00000641806 335 ntBASIC5.22□□□□□ -1.57
UBE3DQ7Z6J8 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC5.22□□□□□ -1.57
UBE3DQ7Z6J8 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC5.22□□□□□ -1.57
UBE3DQ7Z6J8 PAPPA-AS1-201ENST00000445861 2450 ntBASIC5.22□□□□□ -1.57
UBE3DQ7Z6J8 PANDAR-201ENST00000629595 1506 ntBASIC5.22□□□□□ -1.57
UBE3DQ7Z6J8 MTND5P19-201ENST00000424872 1794 ntBASIC5.21□□□□□ -1.57
UBE3DQ7Z6J8 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC5.21□□□□□ -1.57
UBE3DQ7Z6J8 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC5.21□□□□□ -1.57
UBE3DQ7Z6J8 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC5.21□□□□□ -1.57
UBE3DQ7Z6J8 AP001284.1-201ENST00000528393 2118 ntBASIC5.21□□□□□ -1.57
UBE3DQ7Z6J8 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC5.21□□□□□ -1.57
UBE3DQ7Z6J8 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
UBE3DQ7Z6J8 AP005435.3-201ENST00000531260 3198 ntBASIC5.21□□□□□ -1.58
UBE3DQ7Z6J8 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
UBE3DQ7Z6J8 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
UBE3DQ7Z6J8 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
UBE3DQ7Z6J8 RN7SKP145-201ENST00000363291 303 ntBASIC5.21□□□□□ -1.58
UBE3DQ7Z6J8 Y_RNA.158-201ENST00000363651 101 ntBASIC5.21□□□□□ -1.58
UBE3DQ7Z6J8 Y_RNA.378-201ENST00000365652 113 ntBASIC5.21□□□□□ -1.58
UBE3DQ7Z6J8 RNU4-2-201ENST00000365668 141 ntBASIC5.21□□□□□ -1.58
UBE3DQ7Z6J8 RNU6-1106P-201ENST00000390845 107 ntBASIC5.21□□□□□ -1.58
UBE3DQ7Z6J8 PPIAP9-201ENST00000403866 498 ntBASIC5.21□□□□□ -1.58
UBE3DQ7Z6J8 RN7SKP286-201ENST00000410894 299 ntBASIC5.21□□□□□ -1.58
UBE3DQ7Z6J8 RPL31P2-201ENST00000413849 377 ntBASIC5.21□□□□□ -1.58
UBE3DQ7Z6J8 ACTR3BP6-201ENST00000422332 1241 ntBASIC5.21□□□□□ -1.58
UBE3DQ7Z6J8 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC5.21□□□□□ -1.58
UBE3DQ7Z6J8 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC5.21□□□□□ -1.58
UBE3DQ7Z6J8 RPL12P17-201ENST00000432393 498 ntBASIC5.21□□□□□ -1.58
UBE3DQ7Z6J8 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC5.21□□□□□ -1.58
UBE3DQ7Z6J8 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC5.21□□□□□ -1.58
UBE3DQ7Z6J8 MED28P3-201ENST00000444288 531 ntBASIC5.21□□□□□ -1.58
UBE3DQ7Z6J8 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC5.21□□□□□ -1.58
UBE3DQ7Z6J8 RPL36AP13-201ENST00000457490 317 ntBASIC5.21□□□□□ -1.58
UBE3DQ7Z6J8 snoU13.7-201ENST00000459220 104 ntBASIC5.21□□□□□ -1.58
UBE3DQ7Z6J8 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC5.21□□□□□ -1.58
UBE3DQ7Z6J8 RPL30P11-201ENST00000495304 339 ntBASIC5.21□□□□□ -1.58
UBE3DQ7Z6J8 AC016559.2-201ENST00000510759 359 ntBASIC5.21□□□□□ -1.58
UBE3DQ7Z6J8 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC5.21□□□□□ -1.58
UBE3DQ7Z6J8 RNU6-256P-201ENST00000516747 97 ntBASIC5.21□□□□□ -1.58
UBE3DQ7Z6J8 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC5.21□□□□□ -1.58
UBE3DQ7Z6J8 AC090136.1-201ENST00000520009 240 ntBASIC5.21□□□□□ -1.58
UBE3DQ7Z6J8 AP003122.3-201ENST00000526316 255 ntBASIC5.21□□□□□ -1.58
UBE3DQ7Z6J8 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC5.21□□□□□ -1.58
UBE3DQ7Z6J8 AP000763.2-201ENST00000540641 163 ntBASIC5.21□□□□□ -1.58
UBE3DQ7Z6J8 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC5.21□□□□□ -1.58
UBE3DQ7Z6J8 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC5.21□□□□□ -1.58
UBE3DQ7Z6J8 AC023043.2-201ENST00000589678 1026 ntBASIC5.21□□□□□ -1.58
UBE3DQ7Z6J8 AC104695.2-201ENST00000605056 775 ntBASIC5.21□□□□□ -1.58
UBE3DQ7Z6J8 AC011373.1-201ENST00000607270 237 ntBASIC5.21□□□□□ -1.58
UBE3DQ7Z6J8 AC023813.4-201ENST00000607580 580 ntBASIC5.21□□□□□ -1.58
UBE3DQ7Z6J8 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC5.21□□□□□ -1.58
UBE3DQ7Z6J8 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC5.21□□□□□ -1.58
UBE3DQ7Z6J8 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC5.21□□□□□ -1.58
UBE3DQ7Z6J8 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
UBE3DQ7Z6J8 OR10A6-203ENST00000641238 6052 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
UBE3DQ7Z6J8 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC5.21□□□□□ -1.58
UBE3DQ7Z6J8 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
UBE3DQ7Z6J8 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
UBE3DQ7Z6J8 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC5.21□□□□□ -1.58
UBE3DQ7Z6J8 AC100757.1-201ENST00000616872 1835 ntBASIC5.2□□□□□ -1.58
UBE3DQ7Z6J8 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC5.2□□□□□ -1.58
UBE3DQ7Z6J8 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
UBE3DQ7Z6J8 BDP1P-201ENST00000582658 1990 ntBASIC5.2□□□□□ -1.58
UBE3DQ7Z6J8 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC5.2□□□□□ -1.58
UBE3DQ7Z6J8 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
UBE3DQ7Z6J8 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
UBE3DQ7Z6J8 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
UBE3DQ7Z6J8 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
UBE3DQ7Z6J8 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
UBE3DQ7Z6J8 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
UBE3DQ7Z6J8 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
UBE3DQ7Z6J8 AC092681.1-201ENST00000297369 291 ntBASIC5.2□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 169.2 ms