Protein–RNA interactions for Protein: Q7Z3Y7

KRT28, Keratin, type I cytoskeletal 28, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT28Q7Z3Y7 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
KRT28Q7Z3Y7 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
KRT28Q7Z3Y7 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC4.95□□□□□ -1.62
KRT28Q7Z3Y7 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC4.95□□□□□ -1.62
KRT28Q7Z3Y7 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
KRT28Q7Z3Y7 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
KRT28Q7Z3Y7 Y_RNA.408-201ENST00000383987 102 ntBASIC4.95□□□□□ -1.62
KRT28Q7Z3Y7 Y_RNA.500-201ENST00000384466 111 ntBASIC4.95□□□□□ -1.62
KRT28Q7Z3Y7 HDGFP1-201ENST00000405943 252 ntBASIC4.95□□□□□ -1.62
KRT28Q7Z3Y7 AC098592.1-201ENST00000419352 333 ntBASIC4.95□□□□□ -1.62
KRT28Q7Z3Y7 OR1AA1P-201ENST00000419597 916 ntBASIC4.95□□□□□ -1.62
KRT28Q7Z3Y7 MTCO3P1-205ENST00000422088 832 ntBASIC4.95□□□□□ -1.62
KRT28Q7Z3Y7 AC233981.1-201ENST00000423224 461 ntBASIC4.95□□□□□ -1.62
KRT28Q7Z3Y7 AL365203.2-201ENST00000423444 196 ntBASIC4.95□□□□□ -1.62
KRT28Q7Z3Y7 AC010881.1-201ENST00000433830 235 ntBASIC4.95□□□□□ -1.62
KRT28Q7Z3Y7 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC4.95□□□□□ -1.62
KRT28Q7Z3Y7 RPS15AP1-201ENST00000457423 391 ntBASIC4.95□□□□□ -1.62
KRT28Q7Z3Y7 NF1P3-201ENST00000457709 450 ntBASIC4.95□□□□□ -1.62
KRT28Q7Z3Y7 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC4.95□□□□□ -1.62
KRT28Q7Z3Y7 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
KRT28Q7Z3Y7 AC105185.1-201ENST00000518705 535 ntBASIC4.95□□□□□ -1.62
KRT28Q7Z3Y7 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC4.95□□□□□ -1.62
KRT28Q7Z3Y7 CA1-215ENST00000522389 551 ntTSL 3 BASIC4.95□□□□□ -1.62
KRT28Q7Z3Y7 SMARCE1P4-201ENST00000523647 241 ntBASIC4.95□□□□□ -1.62
KRT28Q7Z3Y7 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC4.95□□□□□ -1.62
KRT28Q7Z3Y7 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC4.95□□□□□ -1.62
KRT28Q7Z3Y7 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC4.95□□□□□ -1.62
KRT28Q7Z3Y7 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC4.95□□□□□ -1.62
KRT28Q7Z3Y7 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC4.95□□□□□ -1.62
KRT28Q7Z3Y7 AC010620.1-201ENST00000601088 1102 ntBASIC4.95□□□□□ -1.62
KRT28Q7Z3Y7 AC069304.3-201ENST00000603938 1084 ntBASIC4.95□□□□□ -1.62
KRT28Q7Z3Y7 AC121247.2-201ENST00000604776 136 ntBASIC4.95□□□□□ -1.62
KRT28Q7Z3Y7 AC009318.3-201ENST00000616916 503 ntBASIC4.95□□□□□ -1.62
KRT28Q7Z3Y7 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC4.95□□□□□ -1.62
KRT28Q7Z3Y7 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
KRT28Q7Z3Y7 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC4.95□□□□□ -1.62
KRT28Q7Z3Y7 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
KRT28Q7Z3Y7 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
KRT28Q7Z3Y7 AP001273.1-201ENST00000624493 3152 ntBASIC4.95□□□□□ -1.62
KRT28Q7Z3Y7 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC4.95□□□□□ -1.62
KRT28Q7Z3Y7 AL513185.3-201ENST00000433335 1300 ntBASIC4.95□□□□□ -1.62
KRT28Q7Z3Y7 ZNF542P-204ENST00000482727 1305 ntBASIC4.95□□□□□ -1.62
KRT28Q7Z3Y7 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC4.95□□□□□ -1.62
KRT28Q7Z3Y7 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC4.95□□□□□ -1.62
KRT28Q7Z3Y7 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
KRT28Q7Z3Y7 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC4.94□□□□□ -1.62
KRT28Q7Z3Y7 AC025125.1-201ENST00000624743 1922 ntBASIC4.94□□□□□ -1.62
KRT28Q7Z3Y7 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
KRT28Q7Z3Y7 OR52B1P-201ENST00000316506 909 ntBASIC4.94□□□□□ -1.62
KRT28Q7Z3Y7 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC4.94□□□□□ -1.62
KRT28Q7Z3Y7 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
KRT28Q7Z3Y7 U3.26-201ENST00000391236 204 ntBASIC4.94□□□□□ -1.62
KRT28Q7Z3Y7 SKINT1L-201ENST00000401057 817 ntBASIC4.94□□□□□ -1.62
KRT28Q7Z3Y7 HNRNPDP2-201ENST00000406475 478 ntBASIC4.94□□□□□ -1.62
KRT28Q7Z3Y7 FCF1P2-201ENST00000415284 583 ntBASIC4.94□□□□□ -1.62
KRT28Q7Z3Y7 RPS26P47-201ENST00000427219 348 ntBASIC4.94□□□□□ -1.62
KRT28Q7Z3Y7 RPL31P54-201ENST00000429803 370 ntBASIC4.94□□□□□ -1.62
KRT28Q7Z3Y7 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC4.94□□□□□ -1.62
KRT28Q7Z3Y7 AC073587.1-201ENST00000447093 876 ntBASIC4.94□□□□□ -1.62
KRT28Q7Z3Y7 AC008481.1-201ENST00000463278 396 ntBASIC4.94□□□□□ -1.62
KRT28Q7Z3Y7 ACTG1P13-201ENST00000486987 1043 ntBASIC4.94□□□□□ -1.62
KRT28Q7Z3Y7 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC4.94□□□□□ -1.62
KRT28Q7Z3Y7 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
KRT28Q7Z3Y7 RN7SKP31-201ENST00000516354 278 ntBASIC4.94□□□□□ -1.62
KRT28Q7Z3Y7 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC4.94□□□□□ -1.62
KRT28Q7Z3Y7 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC4.94□□□□□ -1.62
KRT28Q7Z3Y7 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
KRT28Q7Z3Y7 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC4.94□□□□□ -1.62
KRT28Q7Z3Y7 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC4.94□□□□□ -1.62
KRT28Q7Z3Y7 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC4.94□□□□□ -1.62
KRT28Q7Z3Y7 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC4.94□□□□□ -1.62
KRT28Q7Z3Y7 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
KRT28Q7Z3Y7 UBE2NP1-201ENST00000545592 458 ntBASIC4.94□□□□□ -1.62
KRT28Q7Z3Y7 AC090888.1-201ENST00000561335 1141 ntBASIC4.94□□□□□ -1.62
KRT28Q7Z3Y7 MIR4999-201ENST00000585029 91 ntBASIC4.94□□□□□ -1.62
KRT28Q7Z3Y7 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC4.94□□□□□ -1.62
KRT28Q7Z3Y7 AL592221.1-201ENST00000605266 382 ntBASIC4.94□□□□□ -1.62
KRT28Q7Z3Y7 AC123768.4-201ENST00000616244 701 ntBASIC4.94□□□□□ -1.62
KRT28Q7Z3Y7 AL607023.1-201ENST00000620045 248 ntBASIC4.94□□□□□ -1.62
KRT28Q7Z3Y7 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
KRT28Q7Z3Y7 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC4.94□□□□□ -1.62
KRT28Q7Z3Y7 AC007671.2-201ENST00000637344 619 ntBASIC4.94□□□□□ -1.62
KRT28Q7Z3Y7 MKKS-204ENST00000639674 192 ntBASIC4.94□□□□□ -1.62
KRT28Q7Z3Y7 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
KRT28Q7Z3Y7 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
KRT28Q7Z3Y7 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
KRT28Q7Z3Y7 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
KRT28Q7Z3Y7 MTND5P31-201ENST00000419366 1374 ntBASIC4.93□□□□□ -1.62
KRT28Q7Z3Y7 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC4.93□□□□□ -1.62
KRT28Q7Z3Y7 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.93□□□□□ -1.62
KRT28Q7Z3Y7 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC4.93□□□□□ -1.62
KRT28Q7Z3Y7 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.93□□□□□ -1.62
KRT28Q7Z3Y7 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
KRT28Q7Z3Y7 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
KRT28Q7Z3Y7 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC4.93□□□□□ -1.62
KRT28Q7Z3Y7 SUGT1P1-201ENST00000379514 476 ntBASIC4.93□□□□□ -1.62
KRT28Q7Z3Y7 SNORA68.2-201ENST00000391263 128 ntBASIC4.93□□□□□ -1.62
KRT28Q7Z3Y7 BX323014.1-201ENST00000412876 237 ntBASIC4.93□□□□□ -1.62
KRT28Q7Z3Y7 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
KRT28Q7Z3Y7 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC4.93□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 109.3 ms