Protein–RNA interactions for Protein: Q70EL4

USP43, Ubiquitin carboxyl-terminal hydrolase 43, humanhuman

Predictions only

Length 1,123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP43Q70EL4 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC3.9□□□□□ -1.79
USP43Q70EL4 AC055876.5-201ENST00000605667 259 ntBASIC3.9□□□□□ -1.79
USP43Q70EL4 AC069545.1-201ENST00000605671 358 ntBASIC3.9□□□□□ -1.79
USP43Q70EL4 AC099676.1-201ENST00000608886 657 ntBASIC3.9□□□□□ -1.79
USP43Q70EL4 MIR486-1-201ENST00000612171 68 ntBASIC3.9□□□□□ -1.79
USP43Q70EL4 AC007014.2-201ENST00000615581 479 ntBASIC3.9□□□□□ -1.79
USP43Q70EL4 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
USP43Q70EL4 AC145207.9-201ENST00000623802 325 ntBASIC3.9□□□□□ -1.79
USP43Q70EL4 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC3.9□□□□□ -1.79
USP43Q70EL4 MIR6830-201ENST00000636015 70 ntBASIC3.9□□□□□ -1.79
USP43Q70EL4 AC087821.2-201ENST00000637086 450 ntBASIC3.9□□□□□ -1.79
USP43Q70EL4 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC3.9□□□□□ -1.79
USP43Q70EL4 AC090229.1-201ENST00000590983 1609 ntBASIC3.9□□□□□ -1.79
USP43Q70EL4 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC3.9□□□□□ -1.79
USP43Q70EL4 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
USP43Q70EL4 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
USP43Q70EL4 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
USP43Q70EL4 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC3.89□□□□□ -1.79
USP43Q70EL4 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC3.89□□□□□ -1.79
USP43Q70EL4 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
USP43Q70EL4 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC3.89□□□□□ -1.79
USP43Q70EL4 AC010928.1-201ENST00000592477 1447 ntBASIC3.89□□□□□ -1.79
USP43Q70EL4 AL137100.1-201ENST00000556703 1620 ntBASIC3.89□□□□□ -1.79
USP43Q70EL4 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC3.89□□□□□ -1.79
USP43Q70EL4 XIAPP3-201ENST00000312918 795 ntBASIC3.89□□□□□ -1.79
USP43Q70EL4 AL590240.1-201ENST00000334118 313 ntBASIC3.89□□□□□ -1.79
USP43Q70EL4 RNU6-500P-201ENST00000362349 107 ntBASIC3.89□□□□□ -1.79
USP43Q70EL4 SNORA62.2-201ENST00000364672 152 ntBASIC3.89□□□□□ -1.79
USP43Q70EL4 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
USP43Q70EL4 Y_RNA.554-201ENST00000384672 102 ntBASIC3.89□□□□□ -1.79
USP43Q70EL4 AL034374.1-201ENST00000406329 351 ntBASIC3.89□□□□□ -1.79
USP43Q70EL4 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC3.89□□□□□ -1.79
USP43Q70EL4 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC3.89□□□□□ -1.79
USP43Q70EL4 OFD1P18Y-201ENST00000420889 959 ntBASIC3.89□□□□□ -1.79
USP43Q70EL4 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC3.89□□□□□ -1.79
USP43Q70EL4 OFD1P2Y-201ENST00000421895 1149 ntBASIC3.89□□□□□ -1.79
USP43Q70EL4 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC3.89□□□□□ -1.79
USP43Q70EL4 AC017083.1-201ENST00000428093 483 ntBASIC3.89□□□□□ -1.79
USP43Q70EL4 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC3.89□□□□□ -1.79
USP43Q70EL4 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC3.89□□□□□ -1.79
USP43Q70EL4 MTCO3P21-201ENST00000430791 643 ntBASIC3.89□□□□□ -1.79
USP43Q70EL4 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC3.89□□□□□ -1.79
USP43Q70EL4 AL590103.1-201ENST00000434488 307 ntBASIC3.89□□□□□ -1.79
USP43Q70EL4 HMGB1P31-201ENST00000437242 427 ntBASIC3.89□□□□□ -1.79
USP43Q70EL4 RPL23AP89-201ENST00000439324 255 ntBASIC3.89□□□□□ -1.79
USP43Q70EL4 MTND1P30-201ENST00000441241 901 ntBASIC3.89□□□□□ -1.79
USP43Q70EL4 ARL2BPP10-201ENST00000446487 531 ntBASIC3.89□□□□□ -1.79
USP43Q70EL4 GAS5-223ENST00000452197 483 ntTSL 3 BASIC3.89□□□□□ -1.79
USP43Q70EL4 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC3.89□□□□□ -1.79
USP43Q70EL4 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC3.89□□□□□ -1.79
USP43Q70EL4 RPL7P1-201ENST00000468161 747 ntBASIC3.89□□□□□ -1.79
USP43Q70EL4 RPL7P9-201ENST00000468715 747 ntBASIC3.89□□□□□ -1.79
USP43Q70EL4 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC3.89□□□□□ -1.79
USP43Q70EL4 NIPA2P2-201ENST00000496376 1083 ntBASIC3.89□□□□□ -1.79
USP43Q70EL4 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC3.89□□□□□ -1.79
USP43Q70EL4 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC3.89□□□□□ -1.79
USP43Q70EL4 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC3.89□□□□□ -1.79
USP43Q70EL4 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC3.89□□□□□ -1.79
USP43Q70EL4 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC3.89□□□□□ -1.79
USP43Q70EL4 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC3.89□□□□□ -1.79
USP43Q70EL4 AC093840.1-201ENST00000511599 336 ntBASIC3.89□□□□□ -1.79
USP43Q70EL4 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC3.89□□□□□ -1.79
USP43Q70EL4 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC3.89□□□□□ -1.79
USP43Q70EL4 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC3.89□□□□□ -1.79
USP43Q70EL4 AC025881.1-201ENST00000518851 512 ntBASIC3.89□□□□□ -1.79
USP43Q70EL4 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC3.89□□□□□ -1.79
USP43Q70EL4 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC3.89□□□□□ -1.79
USP43Q70EL4 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC3.89□□□□□ -1.79
USP43Q70EL4 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC3.89□□□□□ -1.79
USP43Q70EL4 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC3.89□□□□□ -1.79
USP43Q70EL4 CASP1-216ENST00000534497 825 ntTSL 5 BASIC3.89□□□□□ -1.79
USP43Q70EL4 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC3.89□□□□□ -1.79
USP43Q70EL4 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC3.89□□□□□ -1.79
USP43Q70EL4 AL138976.2-201ENST00000563989 694 ntBASIC3.89□□□□□ -1.79
USP43Q70EL4 ROCK1P1-201ENST00000573767 549 ntBASIC3.89□□□□□ -1.79
USP43Q70EL4 RN7SL652P-201ENST00000577769 300 ntBASIC3.89□□□□□ -1.79
USP43Q70EL4 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC3.89□□□□□ -1.79
USP43Q70EL4 AP001542.2-201ENST00000593141 364 ntBASIC3.89□□□□□ -1.79
USP43Q70EL4 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC3.89□□□□□ -1.79
USP43Q70EL4 AC010680.3-201ENST00000604215 520 ntBASIC3.89□□□□□ -1.79
USP43Q70EL4 AC010200.2-201ENST00000605098 235 ntBASIC3.89□□□□□ -1.79
USP43Q70EL4 AC128687.1-201ENST00000605304 619 ntBASIC3.89□□□□□ -1.79
USP43Q70EL4 AP000238.1-201ENST00000608759 426 ntBASIC3.89□□□□□ -1.79
USP43Q70EL4 MIR6716-201ENST00000613413 80 ntBASIC3.89□□□□□ -1.79
USP43Q70EL4 AC023158.2-201ENST00000614876 543 ntBASIC3.89□□□□□ -1.79
USP43Q70EL4 MIR7702-201ENST00000621931 59 ntBASIC3.89□□□□□ -1.79
USP43Q70EL4 AC008443.7-201ENST00000622195 246 ntBASIC3.89□□□□□ -1.79
USP43Q70EL4 AC000123.2-201ENST00000623124 461 ntBASIC3.89□□□□□ -1.79
USP43Q70EL4 AC112204.3-201ENST00000623822 332 ntBASIC3.89□□□□□ -1.79
USP43Q70EL4 FER-210ENST00000628534 558 ntTSL 5 BASIC3.89□□□□□ -1.79
USP43Q70EL4 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC3.89□□□□□ -1.79
USP43Q70EL4 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC3.89□□□□□ -1.79
USP43Q70EL4 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
USP43Q70EL4 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
USP43Q70EL4 BDP1P-201ENST00000582658 1990 ntBASIC3.89□□□□□ -1.79
USP43Q70EL4 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.89□□□□□ -1.79
USP43Q70EL4 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC3.89□□□□□ -1.79
USP43Q70EL4 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
USP43Q70EL4 OTUD4P1-201ENST00000237841 3067 ntBASIC3.89□□□□□ -1.79
USP43Q70EL4 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC3.88□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 80.8 ms