Protein–RNA interactions for Protein: Q6ZV77

C9orf139, Uncharacterized protein C9orf139, humanhuman

Predictions only

Length 190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf139Q6ZV77 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
C9orf139Q6ZV77 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
C9orf139Q6ZV77 RPS27AP12-201ENST00000429552 465 ntBASIC3.6□□□□□ -1.83
C9orf139Q6ZV77 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC3.6□□□□□ -1.83
C9orf139Q6ZV77 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC3.6□□□□□ -1.83
C9orf139Q6ZV77 AC114495.1-201ENST00000441274 436 ntBASIC3.6□□□□□ -1.83
C9orf139Q6ZV77 AC244505.5-201ENST00000443639 207 ntBASIC3.6□□□□□ -1.83
C9orf139Q6ZV77 NUTF2P3-201ENST00000448540 384 ntBASIC3.6□□□□□ -1.83
C9orf139Q6ZV77 PDSS1P2-201ENST00000449397 678 ntBASIC3.6□□□□□ -1.83
C9orf139Q6ZV77 AL162388.1-201ENST00000450912 352 ntBASIC3.6□□□□□ -1.83
C9orf139Q6ZV77 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC3.6□□□□□ -1.83
C9orf139Q6ZV77 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC3.6□□□□□ -1.83
C9orf139Q6ZV77 RPL23AP65-201ENST00000475608 468 ntBASIC3.6□□□□□ -1.83
C9orf139Q6ZV77 TMED11P-201ENST00000479478 690 ntBASIC3.6□□□□□ -1.83
C9orf139Q6ZV77 LARP1BP2-201ENST00000486594 519 ntBASIC3.6□□□□□ -1.83
C9orf139Q6ZV77 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC3.6□□□□□ -1.83
C9orf139Q6ZV77 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC3.6□□□□□ -1.83
C9orf139Q6ZV77 AL358832.1-201ENST00000497800 389 ntBASIC3.6□□□□□ -1.83
C9orf139Q6ZV77 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC3.6□□□□□ -1.83
C9orf139Q6ZV77 AC114981.1-201ENST00000503897 678 ntBASIC3.6□□□□□ -1.83
C9orf139Q6ZV77 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC3.6□□□□□ -1.83
C9orf139Q6ZV77 POU5F1P7-201ENST00000508759 541 ntBASIC3.6□□□□□ -1.83
C9orf139Q6ZV77 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
C9orf139Q6ZV77 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC3.6□□□□□ -1.83
C9orf139Q6ZV77 AC018797.3-201ENST00000513388 1241 ntBASIC3.6□□□□□ -1.83
C9orf139Q6ZV77 RNA5SP497-201ENST00000516081 97 ntBASIC3.6□□□□□ -1.83
C9orf139Q6ZV77 RNA5SP360-201ENST00000516555 118 ntBASIC3.6□□□□□ -1.83
C9orf139Q6ZV77 MIR2116-201ENST00000517221 80 ntBASIC3.6□□□□□ -1.83
C9orf139Q6ZV77 PAICSP4-201ENST00000517543 1253 ntBASIC3.6□□□□□ -1.83
C9orf139Q6ZV77 AC104986.1-201ENST00000517978 436 ntBASIC3.6□□□□□ -1.83
C9orf139Q6ZV77 MRPL49P2-201ENST00000521066 465 ntBASIC3.6□□□□□ -1.83
C9orf139Q6ZV77 OR5M7P-201ENST00000526140 972 ntBASIC3.6□□□□□ -1.83
C9orf139Q6ZV77 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC3.6□□□□□ -1.83
C9orf139Q6ZV77 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC3.6□□□□□ -1.83
C9orf139Q6ZV77 AL133457.1-201ENST00000564251 987 ntBASIC3.6□□□□□ -1.83
C9orf139Q6ZV77 AC007224.1-201ENST00000564410 144 ntBASIC3.6□□□□□ -1.83
C9orf139Q6ZV77 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC3.6□□□□□ -1.83
C9orf139Q6ZV77 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
C9orf139Q6ZV77 AC015912.2-201ENST00000571053 181 ntBASIC3.6□□□□□ -1.83
C9orf139Q6ZV77 MIR3913-1-201ENST00000577744 102 ntBASIC3.6□□□□□ -1.83
C9orf139Q6ZV77 MIR544B-201ENST00000582372 78 ntBASIC3.6□□□□□ -1.83
C9orf139Q6ZV77 OR4G1P-201ENST00000588632 938 ntBASIC3.6□□□□□ -1.83
C9orf139Q6ZV77 AC079587.1-201ENST00000603846 277 ntBASIC3.6□□□□□ -1.83
C9orf139Q6ZV77 AC112187.2-201ENST00000604345 283 ntBASIC3.6□□□□□ -1.83
C9orf139Q6ZV77 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC3.6□□□□□ -1.83
C9orf139Q6ZV77 AC078899.5-201ENST00000612475 178 ntBASIC3.6□□□□□ -1.83
C9orf139Q6ZV77 MIR6864-201ENST00000617935 70 ntBASIC3.6□□□□□ -1.83
C9orf139Q6ZV77 MIR6891-201ENST00000618788 93 ntBASIC3.6□□□□□ -1.83
C9orf139Q6ZV77 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC3.6□□□□□ -1.83
C9orf139Q6ZV77 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC3.6□□□□□ -1.83
C9orf139Q6ZV77 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
C9orf139Q6ZV77 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
C9orf139Q6ZV77 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
C9orf139Q6ZV77 BBX-203ENST00000402543 3980 ntTSL 5 BASIC3.6□□□□□ -1.83
C9orf139Q6ZV77 FER-202ENST00000438717 1531 ntTSL 2 BASIC3.6□□□□□ -1.83
C9orf139Q6ZV77 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC3.6□□□□□ -1.83
C9orf139Q6ZV77 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC3.6□□□□□ -1.83
C9orf139Q6ZV77 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
C9orf139Q6ZV77 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
C9orf139Q6ZV77 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC3.59□□□□□ -1.83
C9orf139Q6ZV77 XPOTP1-201ENST00000443317 2398 ntBASIC3.59□□□□□ -1.83
C9orf139Q6ZV77 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC3.59□□□□□ -1.83
C9orf139Q6ZV77 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC3.59□□□□□ -1.83
C9orf139Q6ZV77 OR4G2P-201ENST00000328113 903 ntBASIC3.59□□□□□ -1.83
C9orf139Q6ZV77 RNU6-289P-201ENST00000364093 107 ntBASIC3.59□□□□□ -1.83
C9orf139Q6ZV77 RN7SKP226-201ENST00000364912 300 ntBASIC3.59□□□□□ -1.83
C9orf139Q6ZV77 RNU6-1293P-201ENST00000384077 107 ntBASIC3.59□□□□□ -1.83
C9orf139Q6ZV77 MIR649-201ENST00000384843 97 ntBASIC3.59□□□□□ -1.83
C9orf139Q6ZV77 SNORA57.1-201ENST00000391227 145 ntBASIC3.59□□□□□ -1.83
C9orf139Q6ZV77 ARF4P3-201ENST00000397387 509 ntBASIC3.59□□□□□ -1.83
C9orf139Q6ZV77 HSPD1P16-201ENST00000402302 394 ntBASIC3.59□□□□□ -1.83
C9orf139Q6ZV77 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC3.59□□□□□ -1.83
C9orf139Q6ZV77 MIR1193-201ENST00000408109 78 ntBASIC3.59□□□□□ -1.83
C9orf139Q6ZV77 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC3.59□□□□□ -1.83
C9orf139Q6ZV77 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC3.59□□□□□ -1.83
C9orf139Q6ZV77 HMGB3P23-201ENST00000414981 585 ntBASIC3.59□□□□□ -1.83
C9orf139Q6ZV77 USP9YP13-201ENST00000417797 480 ntBASIC3.59□□□□□ -1.83
C9orf139Q6ZV77 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC3.59□□□□□ -1.83
C9orf139Q6ZV77 AL445669.1-201ENST00000426743 755 ntBASIC3.59□□□□□ -1.83
C9orf139Q6ZV77 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC3.59□□□□□ -1.83
C9orf139Q6ZV77 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC3.59□□□□□ -1.83
C9orf139Q6ZV77 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC3.59□□□□□ -1.83
C9orf139Q6ZV77 AC105402.2-201ENST00000438503 358 ntBASIC3.59□□□□□ -1.83
C9orf139Q6ZV77 MTATP6P23-201ENST00000440153 476 ntBASIC3.59□□□□□ -1.83
C9orf139Q6ZV77 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
C9orf139Q6ZV77 RBMX2P4-201ENST00000441256 376 ntBASIC3.59□□□□□ -1.83
C9orf139Q6ZV77 AC114755.5-201ENST00000447760 831 ntBASIC3.59□□□□□ -1.83
C9orf139Q6ZV77 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC3.59□□□□□ -1.83
C9orf139Q6ZV77 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC3.59□□□□□ -1.83
C9orf139Q6ZV77 AL033528.1-201ENST00000453780 140 ntBASIC3.59□□□□□ -1.83
C9orf139Q6ZV77 RPL7P19-201ENST00000469948 618 ntBASIC3.59□□□□□ -1.83
C9orf139Q6ZV77 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
C9orf139Q6ZV77 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC3.59□□□□□ -1.83
C9orf139Q6ZV77 AP000893.1-201ENST00000474462 794 ntBASIC3.59□□□□□ -1.83
C9orf139Q6ZV77 AC017015.1-201ENST00000477387 286 ntBASIC3.59□□□□□ -1.83
C9orf139Q6ZV77 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC3.59□□□□□ -1.83
C9orf139Q6ZV77 AC023424.2-201ENST00000493479 777 ntBASIC3.59□□□□□ -1.83
C9orf139Q6ZV77 RN7SL812P-201ENST00000493791 279 ntBASIC3.59□□□□□ -1.83
C9orf139Q6ZV77 RPS4XP18-201ENST00000495480 763 ntBASIC3.59□□□□□ -1.83
C9orf139Q6ZV77 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC3.59□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 95.8 ms