Protein–RNA interactions for Protein: Q6ZNE9

RUFY4, RUN and FYVE domain-containing protein 4, humanhuman

Predictions only

Length 571 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RUFY4Q6ZNE9 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
RUFY4Q6ZNE9 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
RUFY4Q6ZNE9 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC5.52□□□□□ -1.53
RUFY4Q6ZNE9 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
RUFY4Q6ZNE9 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC5.52□□□□□ -1.53
RUFY4Q6ZNE9 AL672167.1-204ENST00000641875 3017 ntBASIC5.52□□□□□ -1.53
RUFY4Q6ZNE9 FAP-203ENST00000443424 2598 ntTSL 2 BASIC5.52□□□□□ -1.53
RUFY4Q6ZNE9 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
RUFY4Q6ZNE9 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
RUFY4Q6ZNE9 RNU6-359P-201ENST00000365466 108 ntBASIC5.52□□□□□ -1.53
RUFY4Q6ZNE9 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC5.52□□□□□ -1.53
RUFY4Q6ZNE9 MT-TD-201ENST00000387419 68 ntBASIC5.52□□□□□ -1.53
RUFY4Q6ZNE9 RNU2-21P-201ENST00000410368 188 ntBASIC5.52□□□□□ -1.53
RUFY4Q6ZNE9 RPL31P2-201ENST00000413849 377 ntBASIC5.52□□□□□ -1.53
RUFY4Q6ZNE9 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC5.52□□□□□ -1.53
RUFY4Q6ZNE9 AC009238.2-201ENST00000431026 355 ntBASIC5.52□□□□□ -1.53
RUFY4Q6ZNE9 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC5.52□□□□□ -1.53
RUFY4Q6ZNE9 CEACAMP1-201ENST00000434624 1035 ntBASIC5.52□□□□□ -1.53
RUFY4Q6ZNE9 RPS29P9-201ENST00000440360 171 ntBASIC5.52□□□□□ -1.53
RUFY4Q6ZNE9 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC5.52□□□□□ -1.53
RUFY4Q6ZNE9 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC5.52□□□□□ -1.53
RUFY4Q6ZNE9 snoU13.8-201ENST00000458890 104 ntBASIC5.52□□□□□ -1.53
RUFY4Q6ZNE9 PLGLA-201ENST00000465668 449 ntBASIC5.52□□□□□ -1.53
RUFY4Q6ZNE9 RN7SL346P-201ENST00000491561 294 ntBASIC5.52□□□□□ -1.53
RUFY4Q6ZNE9 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC5.52□□□□□ -1.53
RUFY4Q6ZNE9 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
RUFY4Q6ZNE9 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC5.52□□□□□ -1.53
RUFY4Q6ZNE9 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC5.52□□□□□ -1.53
RUFY4Q6ZNE9 AC025465.4-201ENST00000513422 638 ntBASIC5.52□□□□□ -1.53
RUFY4Q6ZNE9 AC093853.1-201ENST00000515689 483 ntBASIC5.52□□□□□ -1.53
RUFY4Q6ZNE9 RNA5SP392-201ENST00000516905 112 ntBASIC5.52□□□□□ -1.53
RUFY4Q6ZNE9 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC5.52□□□□□ -1.53
RUFY4Q6ZNE9 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC5.52□□□□□ -1.53
RUFY4Q6ZNE9 OR5AN2P-201ENST00000534535 896 ntBASIC5.52□□□□□ -1.53
RUFY4Q6ZNE9 AP006289.1-201ENST00000538089 277 ntBASIC5.52□□□□□ -1.53
RUFY4Q6ZNE9 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC5.52□□□□□ -1.53
RUFY4Q6ZNE9 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC5.52□□□□□ -1.53
RUFY4Q6ZNE9 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC5.52□□□□□ -1.53
RUFY4Q6ZNE9 AC124068.1-201ENST00000563131 678 ntBASIC5.52□□□□□ -1.53
RUFY4Q6ZNE9 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC5.52□□□□□ -1.53
RUFY4Q6ZNE9 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
RUFY4Q6ZNE9 RN7SL802P-201ENST00000577858 299 ntBASIC5.52□□□□□ -1.53
RUFY4Q6ZNE9 AC091042.1-201ENST00000579213 173 ntBASIC5.52□□□□□ -1.53
RUFY4Q6ZNE9 MIR3118-1-201ENST00000581787 76 ntBASIC5.52□□□□□ -1.53
RUFY4Q6ZNE9 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC5.52□□□□□ -1.53
RUFY4Q6ZNE9 AC006272.2-201ENST00000594725 163 ntBASIC5.52□□□□□ -1.53
RUFY4Q6ZNE9 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC5.52□□□□□ -1.53
RUFY4Q6ZNE9 AC234771.5-201ENST00000600161 514 ntBASIC5.52□□□□□ -1.53
RUFY4Q6ZNE9 AC020910.3-201ENST00000603701 874 ntBASIC5.52□□□□□ -1.53
RUFY4Q6ZNE9 AC093788.1-201ENST00000609356 927 ntBASIC5.52□□□□□ -1.53
RUFY4Q6ZNE9 MIR378J-201ENST00000611988 109 ntBASIC5.52□□□□□ -1.53
RUFY4Q6ZNE9 BX005214.3-202ENST00000619809 325 ntBASIC5.52□□□□□ -1.53
RUFY4Q6ZNE9 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC5.52□□□□□ -1.53
RUFY4Q6ZNE9 MIR3662-201ENST00000637030 95 ntBASIC5.52□□□□□ -1.53
RUFY4Q6ZNE9 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC5.52□□□□□ -1.53
RUFY4Q6ZNE9 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC5.52□□□□□ -1.53
RUFY4Q6ZNE9 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC5.52□□□□□ -1.53
RUFY4Q6ZNE9 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
RUFY4Q6ZNE9 MTND5P33-201ENST00000571250 1450 ntBASIC5.51□□□□□ -1.53
RUFY4Q6ZNE9 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
RUFY4Q6ZNE9 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
RUFY4Q6ZNE9 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
RUFY4Q6ZNE9 AC099654.2-201ENST00000433031 1980 ntBASIC5.51□□□□□ -1.53
RUFY4Q6ZNE9 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC5.51□□□□□ -1.53
RUFY4Q6ZNE9 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
RUFY4Q6ZNE9 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC5.51□□□□□ -1.53
RUFY4Q6ZNE9 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC5.51□□□□□ -1.53
RUFY4Q6ZNE9 RNU5E-1-201ENST00000362477 120 ntBASIC5.51□□□□□ -1.53
RUFY4Q6ZNE9 Y_RNA.159-201ENST00000363674 87 ntBASIC5.51□□□□□ -1.53
RUFY4Q6ZNE9 Y_RNA.160-201ENST00000363677 92 ntBASIC5.51□□□□□ -1.53
RUFY4Q6ZNE9 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
RUFY4Q6ZNE9 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
RUFY4Q6ZNE9 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC5.51□□□□□ -1.53
RUFY4Q6ZNE9 RPL31P1-201ENST00000398116 372 ntBASIC5.51□□□□□ -1.53
RUFY4Q6ZNE9 MTATP6P18-201ENST00000417994 673 ntBASIC5.51□□□□□ -1.53
RUFY4Q6ZNE9 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC5.51□□□□□ -1.53
RUFY4Q6ZNE9 ZDHHC20P1-204ENST00000435787 423 ntBASIC5.51□□□□□ -1.53
RUFY4Q6ZNE9 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC5.51□□□□□ -1.53
RUFY4Q6ZNE9 USP9YP15-201ENST00000442391 422 ntBASIC5.51□□□□□ -1.53
RUFY4Q6ZNE9 AC073264.2-201ENST00000448886 166 ntBASIC5.51□□□□□ -1.53
RUFY4Q6ZNE9 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC5.51□□□□□ -1.53
RUFY4Q6ZNE9 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC5.51□□□□□ -1.53
RUFY4Q6ZNE9 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC5.51□□□□□ -1.53
RUFY4Q6ZNE9 AP001992.1-205ENST00000462248 379 ntBASIC5.51□□□□□ -1.53
RUFY4Q6ZNE9 PPIAP21-201ENST00000464473 501 ntBASIC5.51□□□□□ -1.53
RUFY4Q6ZNE9 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC5.51□□□□□ -1.53
RUFY4Q6ZNE9 AC010587.1-201ENST00000505809 469 ntBASIC5.51□□□□□ -1.53
RUFY4Q6ZNE9 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC5.51□□□□□ -1.53
RUFY4Q6ZNE9 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC5.51□□□□□ -1.53
RUFY4Q6ZNE9 MAL2-201ENST00000522112 573 ntTSL 4 BASIC5.51□□□□□ -1.53
RUFY4Q6ZNE9 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC5.51□□□□□ -1.53
RUFY4Q6ZNE9 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC5.51□□□□□ -1.53
RUFY4Q6ZNE9 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC5.51□□□□□ -1.53
RUFY4Q6ZNE9 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC5.51□□□□□ -1.53
RUFY4Q6ZNE9 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC5.51□□□□□ -1.53
RUFY4Q6ZNE9 MEG8-218ENST00000556720 456 ntTSL 3 BASIC5.51□□□□□ -1.53
RUFY4Q6ZNE9 AL356432.3-201ENST00000568952 465 ntBASIC5.51□□□□□ -1.53
RUFY4Q6ZNE9 AC209154.1-201ENST00000582156 337 ntBASIC5.51□□□□□ -1.53
RUFY4Q6ZNE9 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC5.51□□□□□ -1.53
RUFY4Q6ZNE9 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC5.51□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 161.1 ms