Protein–RNA interactions for Protein: Q6PCD5

RFWD3, E3 ubiquitin-protein ligase RFWD3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD3Q6PCD5 OR10V3P-201ENST00000525712 725 ntBASIC3.56□□□□□ -1.84
RFWD3Q6PCD5 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC3.56□□□□□ -1.84
RFWD3Q6PCD5 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC3.56□□□□□ -1.84
RFWD3Q6PCD5 AC026333.2-201ENST00000542164 106 ntBASIC3.56□□□□□ -1.84
RFWD3Q6PCD5 NCAPGP2-201ENST00000557911 754 ntBASIC3.56□□□□□ -1.84
RFWD3Q6PCD5 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC3.56□□□□□ -1.84
RFWD3Q6PCD5 AL355816.2-201ENST00000610049 647 ntBASIC3.56□□□□□ -1.84
RFWD3Q6PCD5 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC3.56□□□□□ -1.84
RFWD3Q6PCD5 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC3.56□□□□□ -1.84
RFWD3Q6PCD5 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
RFWD3Q6PCD5 ABBA01000935.2-201ENST00000637477 838 ntBASIC3.56□□□□□ -1.84
RFWD3Q6PCD5 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
RFWD3Q6PCD5 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.56□□□□□ -1.84
RFWD3Q6PCD5 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.56□□□□□ -1.84
RFWD3Q6PCD5 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.56□□□□□ -1.84
RFWD3Q6PCD5 AP001148.1-201ENST00000624124 2359 ntBASIC3.55□□□□□ -1.84
RFWD3Q6PCD5 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
RFWD3Q6PCD5 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
RFWD3Q6PCD5 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC3.55□□□□□ -1.84
RFWD3Q6PCD5 ZNF29P-201ENST00000225587 168 ntBASIC3.55□□□□□ -1.84
RFWD3Q6PCD5 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
RFWD3Q6PCD5 RNA5SP72-201ENST00000364442 117 ntBASIC3.55□□□□□ -1.84
RFWD3Q6PCD5 OR1L1-202ENST00000373686 1083 ntBASIC3.55□□□□□ -1.84
RFWD3Q6PCD5 MIR34B-201ENST00000385076 84 ntBASIC3.55□□□□□ -1.84
RFWD3Q6PCD5 OR51A3P-201ENST00000413596 924 ntBASIC3.55□□□□□ -1.84
RFWD3Q6PCD5 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC3.55□□□□□ -1.84
RFWD3Q6PCD5 NEK4P1-201ENST00000433383 879 ntBASIC3.55□□□□□ -1.84
RFWD3Q6PCD5 Z80107.1-201ENST00000436830 412 ntBASIC3.55□□□□□ -1.84
RFWD3Q6PCD5 AC105402.2-201ENST00000438503 358 ntBASIC3.55□□□□□ -1.84
RFWD3Q6PCD5 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC3.55□□□□□ -1.84
RFWD3Q6PCD5 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC3.55□□□□□ -1.84
RFWD3Q6PCD5 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
RFWD3Q6PCD5 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC3.55□□□□□ -1.84
RFWD3Q6PCD5 TMPRSS11BNL-205ENST00000514295 1262 ntBASIC3.55□□□□□ -1.84
RFWD3Q6PCD5 AC025437.3-201ENST00000523178 771 ntTSL 5 BASIC3.55□□□□□ -1.84
RFWD3Q6PCD5 AP001636.2-201ENST00000525517 696 ntBASIC3.55□□□□□ -1.84
RFWD3Q6PCD5 RGS4-207ENST00000527809 817 ntTSL 4 BASIC3.55□□□□□ -1.84
RFWD3Q6PCD5 HIGD1AP10-201ENST00000527837 282 ntBASIC3.55□□□□□ -1.84
RFWD3Q6PCD5 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC3.55□□□□□ -1.84
RFWD3Q6PCD5 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.55□□□□□ -1.84
RFWD3Q6PCD5 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
RFWD3Q6PCD5 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC3.55□□□□□ -1.84
RFWD3Q6PCD5 AL132857.1-201ENST00000555180 708 ntBASIC3.55□□□□□ -1.84
RFWD3Q6PCD5 MIR5047-201ENST00000579212 100 ntBASIC3.55□□□□□ -1.84
RFWD3Q6PCD5 MIR4666A-201ENST00000580160 79 ntBASIC3.55□□□□□ -1.84
RFWD3Q6PCD5 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC3.55□□□□□ -1.84
RFWD3Q6PCD5 AC007179.3-201ENST00000604976 235 ntBASIC3.55□□□□□ -1.84
RFWD3Q6PCD5 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC3.55□□□□□ -1.84
RFWD3Q6PCD5 AL583856.2-201ENST00000606298 543 ntBASIC3.55□□□□□ -1.84
RFWD3Q6PCD5 RNU4-5P-201ENST00000607255 135 ntBASIC3.55□□□□□ -1.84
RFWD3Q6PCD5 AP004247.3-201ENST00000608682 624 ntBASIC3.55□□□□□ -1.84
RFWD3Q6PCD5 AP000238.1-201ENST00000608759 426 ntBASIC3.55□□□□□ -1.84
RFWD3Q6PCD5 AL159169.3-201ENST00000608871 561 ntBASIC3.55□□□□□ -1.84
RFWD3Q6PCD5 STARD13-AS-235ENST00000609335 855 ntTSL 5 BASIC3.55□□□□□ -1.84
RFWD3Q6PCD5 AL450489.1-201ENST00000612071 468 ntBASIC3.55□□□□□ -1.84
RFWD3Q6PCD5 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
RFWD3Q6PCD5 AC048347.1-201ENST00000624621 427 ntBASIC3.55□□□□□ -1.84
RFWD3Q6PCD5 AL109659.3-201ENST00000624985 950 ntBASIC3.55□□□□□ -1.84
RFWD3Q6PCD5 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
RFWD3Q6PCD5 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.55□□□□□ -1.84
RFWD3Q6PCD5 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
RFWD3Q6PCD5 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
RFWD3Q6PCD5 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
RFWD3Q6PCD5 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.54□□□□□ -1.84
RFWD3Q6PCD5 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC3.54□□□□□ -1.84
RFWD3Q6PCD5 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.54□□□□□ -1.84
RFWD3Q6PCD5 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
RFWD3Q6PCD5 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
RFWD3Q6PCD5 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
RFWD3Q6PCD5 RNA5SP197-201ENST00000363357 119 ntBASIC3.54□□□□□ -1.84
RFWD3Q6PCD5 Y_RNA.333-201ENST00000365274 102 ntBASIC3.54□□□□□ -1.84
RFWD3Q6PCD5 RNU6-272P-201ENST00000411028 104 ntBASIC3.54□□□□□ -1.84
RFWD3Q6PCD5 GLRXP1-201ENST00000423261 334 ntBASIC3.54□□□□□ -1.84
RFWD3Q6PCD5 NANOGP5-201ENST00000424456 877 ntBASIC3.54□□□□□ -1.84
RFWD3Q6PCD5 MTCYBP32-201ENST00000427945 1084 ntBASIC3.54□□□□□ -1.84
RFWD3Q6PCD5 ARF4P2-201ENST00000430209 526 ntBASIC3.54□□□□□ -1.84
RFWD3Q6PCD5 TRIM60P3Y-201ENST00000432201 673 ntBASIC3.54□□□□□ -1.84
RFWD3Q6PCD5 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC3.54□□□□□ -1.84
RFWD3Q6PCD5 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.54□□□□□ -1.84
RFWD3Q6PCD5 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC3.54□□□□□ -1.84
RFWD3Q6PCD5 AC004865.1-201ENST00000442276 1003 ntBASIC3.54□□□□□ -1.84
RFWD3Q6PCD5 HMGB3P6-201ENST00000444896 598 ntBASIC3.54□□□□□ -1.84
RFWD3Q6PCD5 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC3.54□□□□□ -1.84
RFWD3Q6PCD5 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC3.54□□□□□ -1.84
RFWD3Q6PCD5 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC3.54□□□□□ -1.84
RFWD3Q6PCD5 NPM1P13-201ENST00000452663 865 ntBASIC3.54□□□□□ -1.84
RFWD3Q6PCD5 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC3.54□□□□□ -1.84
RFWD3Q6PCD5 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC3.54□□□□□ -1.84
RFWD3Q6PCD5 AC096992.1-201ENST00000459808 709 ntBASIC3.54□□□□□ -1.84
RFWD3Q6PCD5 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
RFWD3Q6PCD5 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC3.54□□□□□ -1.84
RFWD3Q6PCD5 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC3.54□□□□□ -1.84
RFWD3Q6PCD5 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC3.54□□□□□ -1.84
RFWD3Q6PCD5 AP000926.4-201ENST00000527351 454 ntBASIC3.54□□□□□ -1.84
RFWD3Q6PCD5 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC3.54□□□□□ -1.84
RFWD3Q6PCD5 AC011611.1-201ENST00000552179 197 ntBASIC3.54□□□□□ -1.84
RFWD3Q6PCD5 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC3.54□□□□□ -1.84
RFWD3Q6PCD5 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC3.54□□□□□ -1.84
RFWD3Q6PCD5 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC3.54□□□□□ -1.84
RFWD3Q6PCD5 AL845331.3-202ENST00000562856 261 ntBASIC3.54□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 77.3 ms