Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC4.07□□□□□ -1.76
ZNF549Q6P9A3 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC4.07□□□□□ -1.76
ZNF549Q6P9A3 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC4.07□□□□□ -1.76
ZNF549Q6P9A3 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC4.07□□□□□ -1.76
ZNF549Q6P9A3 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC4.07□□□□□ -1.76
ZNF549Q6P9A3 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC4.07□□□□□ -1.76
ZNF549Q6P9A3 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC4.07□□□□□ -1.76
ZNF549Q6P9A3 AC098614.4-201ENST00000607601 462 ntBASIC4.07□□□□□ -1.76
ZNF549Q6P9A3 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC4.07□□□□□ -1.76
ZNF549Q6P9A3 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC4.07□□□□□ -1.76
ZNF549Q6P9A3 AC092650.2-201ENST00000619984 902 ntBASIC4.07□□□□□ -1.76
ZNF549Q6P9A3 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC4.07□□□□□ -1.76
ZNF549Q6P9A3 AC022140.2-201ENST00000623500 188 ntBASIC4.07□□□□□ -1.76
ZNF549Q6P9A3 AC120349.2-201ENST00000625002 298 ntBASIC4.07□□□□□ -1.76
ZNF549Q6P9A3 OR5AK4P-201ENST00000635912 903 ntBASIC4.07□□□□□ -1.76
ZNF549Q6P9A3 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC4.07□□□□□ -1.76
ZNF549Q6P9A3 AC068254.2-201ENST00000623938 3577 ntBASIC4.07□□□□□ -1.76
ZNF549Q6P9A3 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC4.07□□□□□ -1.76
ZNF549Q6P9A3 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC4.07□□□□□ -1.76
ZNF549Q6P9A3 AC092079.1-201ENST00000558620 1985 ntBASIC4.07□□□□□ -1.76
ZNF549Q6P9A3 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
ZNF549Q6P9A3 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
ZNF549Q6P9A3 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
ZNF549Q6P9A3 ASNSP1-204ENST00000641977 1664 ntBASIC4.06□□□□□ -1.76
ZNF549Q6P9A3 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC4.06□□□□□ -1.76
ZNF549Q6P9A3 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC4.06□□□□□ -1.76
ZNF549Q6P9A3 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
ZNF549Q6P9A3 ZNF37BP-203ENST00000452306 1352 ntBASIC4.06□□□□□ -1.76
ZNF549Q6P9A3 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
ZNF549Q6P9A3 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
ZNF549Q6P9A3 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
ZNF549Q6P9A3 RNU5F-6P-201ENST00000362979 116 ntBASIC4.06□□□□□ -1.76
ZNF549Q6P9A3 RNA5SP513-201ENST00000364648 118 ntBASIC4.06□□□□□ -1.76
ZNF549Q6P9A3 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
ZNF549Q6P9A3 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
ZNF549Q6P9A3 MIR141-201ENST00000384975 95 ntBASIC4.06□□□□□ -1.76
ZNF549Q6P9A3 RPL17P50-201ENST00000396131 546 ntBASIC4.06□□□□□ -1.76
ZNF549Q6P9A3 BTF3P7-201ENST00000407097 488 ntBASIC4.06□□□□□ -1.76
ZNF549Q6P9A3 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
ZNF549Q6P9A3 AL450992.3-201ENST00000413192 568 ntBASIC4.06□□□□□ -1.76
ZNF549Q6P9A3 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC4.06□□□□□ -1.76
ZNF549Q6P9A3 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC4.06□□□□□ -1.76
ZNF549Q6P9A3 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC4.06□□□□□ -1.76
ZNF549Q6P9A3 RPL18P10-201ENST00000425606 538 ntBASIC4.06□□□□□ -1.76
ZNF549Q6P9A3 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC4.06□□□□□ -1.76
ZNF549Q6P9A3 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
ZNF549Q6P9A3 MTND3P21-201ENST00000433774 331 ntBASIC4.06□□□□□ -1.76
ZNF549Q6P9A3 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC4.06□□□□□ -1.76
ZNF549Q6P9A3 RNU7-27P-201ENST00000459281 62 ntBASIC4.06□□□□□ -1.76
ZNF549Q6P9A3 SNORD42A-201ENST00000459584 64 ntBASIC4.06□□□□□ -1.76
ZNF549Q6P9A3 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC4.06□□□□□ -1.76
ZNF549Q6P9A3 AC023424.2-201ENST00000493479 777 ntBASIC4.06□□□□□ -1.76
ZNF549Q6P9A3 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC4.06□□□□□ -1.76
ZNF549Q6P9A3 HMGB1P28-201ENST00000507778 552 ntBASIC4.06□□□□□ -1.76
ZNF549Q6P9A3 MTCYBP43-201ENST00000513621 740 ntBASIC4.06□□□□□ -1.76
ZNF549Q6P9A3 AC116347.2-201ENST00000514912 523 ntBASIC4.06□□□□□ -1.76
ZNF549Q6P9A3 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC4.06□□□□□ -1.76
ZNF549Q6P9A3 NPM1P6-201ENST00000521088 871 ntBASIC4.06□□□□□ -1.76
ZNF549Q6P9A3 AP001189.2-201ENST00000527320 189 ntBASIC4.06□□□□□ -1.76
ZNF549Q6P9A3 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC4.06□□□□□ -1.76
ZNF549Q6P9A3 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC4.06□□□□□ -1.76
ZNF549Q6P9A3 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC4.06□□□□□ -1.76
ZNF549Q6P9A3 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
ZNF549Q6P9A3 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC4.06□□□□□ -1.76
ZNF549Q6P9A3 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC4.06□□□□□ -1.76
ZNF549Q6P9A3 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC4.06□□□□□ -1.76
ZNF549Q6P9A3 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC4.06□□□□□ -1.76
ZNF549Q6P9A3 ZNF519P2-201ENST00000557032 169 ntBASIC4.06□□□□□ -1.76
ZNF549Q6P9A3 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC4.06□□□□□ -1.76
ZNF549Q6P9A3 NPM1P47-201ENST00000560843 856 ntBASIC4.06□□□□□ -1.76
ZNF549Q6P9A3 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC4.06□□□□□ -1.76
ZNF549Q6P9A3 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC4.06□□□□□ -1.76
ZNF549Q6P9A3 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC4.06□□□□□ -1.76
ZNF549Q6P9A3 AP001004.1-201ENST00000582468 324 ntBASIC4.06□□□□□ -1.76
ZNF549Q6P9A3 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC4.06□□□□□ -1.76
ZNF549Q6P9A3 AC083760.1-201ENST00000589621 670 ntBASIC4.06□□□□□ -1.76
ZNF549Q6P9A3 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC4.06□□□□□ -1.76
ZNF549Q6P9A3 AL596327.1-201ENST00000603629 213 ntBASIC4.06□□□□□ -1.76
ZNF549Q6P9A3 AC007014.2-201ENST00000615581 479 ntBASIC4.06□□□□□ -1.76
ZNF549Q6P9A3 AC243756.2-201ENST00000618406 463 ntBASIC4.06□□□□□ -1.76
ZNF549Q6P9A3 AC233309.1-201ENST00000619522 751 ntBASIC4.06□□□□□ -1.76
ZNF549Q6P9A3 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC4.06□□□□□ -1.76
ZNF549Q6P9A3 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC4.06□□□□□ -1.76
ZNF549Q6P9A3 AC103858.2-201ENST00000621471 543 ntBASIC4.06□□□□□ -1.76
ZNF549Q6P9A3 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC4.06□□□□□ -1.76
ZNF549Q6P9A3 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
ZNF549Q6P9A3 ATE1-AS1-202ENST00000636460 506 ntBASIC4.06□□□□□ -1.76
ZNF549Q6P9A3 AC046144.1-201ENST00000478559 1853 ntBASIC4.06□□□□□ -1.76
ZNF549Q6P9A3 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC4.06□□□□□ -1.76
ZNF549Q6P9A3 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC4.06□□□□□ -1.76
ZNF549Q6P9A3 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
ZNF549Q6P9A3 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC4.05□□□□□ -1.76
ZNF549Q6P9A3 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
ZNF549Q6P9A3 AC107027.3-201ENST00000565095 3473 ntBASIC4.05□□□□□ -1.76
ZNF549Q6P9A3 CDR1-202ENST00000625883 1485 ntBASIC4.05□□□□□ -1.76
ZNF549Q6P9A3 AC126755.2-208ENST00000327792 462 ntBASIC4.05□□□□□ -1.76
ZNF549Q6P9A3 AC138969.1-213ENST00000331436 462 ntBASIC4.05□□□□□ -1.76
ZNF549Q6P9A3 SYF2-202ENST00000354361 926 ntTSL 2 BASIC4.05□□□□□ -1.76
ZNF549Q6P9A3 MIR383-201ENST00000362257 73 ntBASIC4.05□□□□□ -1.76
ZNF549Q6P9A3 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC4.05□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 81.3 ms