Protein–RNA interactions for Protein: Q53GD3

SLC44A4, Choline transporter-like protein 4, humanhuman

Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A4Q53GD3 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC4.69□□□□□ -1.66
SLC44A4Q53GD3 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC4.69□□□□□ -1.66
SLC44A4Q53GD3 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC4.69□□□□□ -1.66
SLC44A4Q53GD3 FKBP1BP1-201ENST00000553366 325 ntBASIC4.69□□□□□ -1.66
SLC44A4Q53GD3 RPL21P7-201ENST00000557463 483 ntBASIC4.69□□□□□ -1.66
SLC44A4Q53GD3 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC4.69□□□□□ -1.66
SLC44A4Q53GD3 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC4.69□□□□□ -1.66
SLC44A4Q53GD3 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC4.69□□□□□ -1.66
SLC44A4Q53GD3 AC012065.4-201ENST00000602445 679 ntBASIC4.69□□□□□ -1.66
SLC44A4Q53GD3 AC025588.3-201ENST00000604182 274 ntBASIC4.69□□□□□ -1.66
SLC44A4Q53GD3 AC090186.1-201ENST00000605991 572 ntBASIC4.69□□□□□ -1.66
SLC44A4Q53GD3 AL357078.3-201ENST00000607528 618 ntBASIC4.69□□□□□ -1.66
SLC44A4Q53GD3 AC109347.2-201ENST00000610220 349 ntBASIC4.69□□□□□ -1.66
SLC44A4Q53GD3 AC008498.1-201ENST00000613012 531 ntBASIC4.69□□□□□ -1.66
SLC44A4Q53GD3 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC4.69□□□□□ -1.66
SLC44A4Q53GD3 AC025048.6-202ENST00000627667 438 ntBASIC4.69□□□□□ -1.66
SLC44A4Q53GD3 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
SLC44A4Q53GD3 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
SLC44A4Q53GD3 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
SLC44A4Q53GD3 AC006971.1-201ENST00000407916 4486 ntBASIC4.69□□□□□ -1.66
SLC44A4Q53GD3 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.69□□□□□ -1.66
SLC44A4Q53GD3 ANKRD62P1-201ENST00000434304 1623 ntBASIC4.68□□□□□ -1.66
SLC44A4Q53GD3 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
SLC44A4Q53GD3 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC4.68□□□□□ -1.66
SLC44A4Q53GD3 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.68□□□□□ -1.66
SLC44A4Q53GD3 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
SLC44A4Q53GD3 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
SLC44A4Q53GD3 NFIB-202ENST00000380924 840 ntTSL 5 BASIC4.68□□□□□ -1.66
SLC44A4Q53GD3 ENSAP1-201ENST00000392855 326 ntBASIC4.68□□□□□ -1.66
SLC44A4Q53GD3 HMGB1P17-201ENST00000403495 628 ntBASIC4.68□□□□□ -1.66
SLC44A4Q53GD3 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC4.68□□□□□ -1.66
SLC44A4Q53GD3 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC4.68□□□□□ -1.66
SLC44A4Q53GD3 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC4.68□□□□□ -1.66
SLC44A4Q53GD3 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC4.68□□□□□ -1.66
SLC44A4Q53GD3 GCA-203ENST00000429691 824 ntTSL 3 BASIC4.68□□□□□ -1.66
SLC44A4Q53GD3 AC131571.1-201ENST00000429821 577 ntTSL 5 BASIC4.68□□□□□ -1.66
SLC44A4Q53GD3 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC4.68□□□□□ -1.66
SLC44A4Q53GD3 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC4.68□□□□□ -1.66
SLC44A4Q53GD3 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
SLC44A4Q53GD3 MTCO1P27-201ENST00000448269 226 ntBASIC4.68□□□□□ -1.66
SLC44A4Q53GD3 AC005297.2-201ENST00000450430 606 ntBASIC4.68□□□□□ -1.66
SLC44A4Q53GD3 BX322784.1-201ENST00000455793 1077 ntBASIC4.68□□□□□ -1.66
SLC44A4Q53GD3 AC091564.1-201ENST00000464563 479 ntBASIC4.68□□□□□ -1.66
SLC44A4Q53GD3 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC4.68□□□□□ -1.66
SLC44A4Q53GD3 UBTFL6-201ENST00000477929 1024 ntBASIC4.68□□□□□ -1.66
SLC44A4Q53GD3 AC020890.1-201ENST00000491837 504 ntBASIC4.68□□□□□ -1.66
SLC44A4Q53GD3 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC4.68□□□□□ -1.66
SLC44A4Q53GD3 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC4.68□□□□□ -1.66
SLC44A4Q53GD3 RNA5SP216-201ENST00000516111 123 ntBASIC4.68□□□□□ -1.66
SLC44A4Q53GD3 RN7SKP277-201ENST00000516895 283 ntBASIC4.68□□□□□ -1.66
SLC44A4Q53GD3 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC4.68□□□□□ -1.66
SLC44A4Q53GD3 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC4.68□□□□□ -1.66
SLC44A4Q53GD3 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC4.68□□□□□ -1.66
SLC44A4Q53GD3 AC090281.1-201ENST00000523019 276 ntBASIC4.68□□□□□ -1.66
SLC44A4Q53GD3 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
SLC44A4Q53GD3 PDCD5P1-201ENST00000543528 309 ntBASIC4.68□□□□□ -1.66
SLC44A4Q53GD3 OR8R1P-201ENST00000543943 764 ntBASIC4.68□□□□□ -1.66
SLC44A4Q53GD3 AC092470.1-201ENST00000546187 132 ntBASIC4.68□□□□□ -1.66
SLC44A4Q53GD3 CCNG2P1-201ENST00000549521 1000 ntBASIC4.68□□□□□ -1.66
SLC44A4Q53GD3 AC087883.1-201ENST00000551882 391 ntBASIC4.68□□□□□ -1.66
SLC44A4Q53GD3 AC084757.1-201ENST00000559987 490 ntBASIC4.68□□□□□ -1.66
SLC44A4Q53GD3 AC015660.2-201ENST00000561362 323 ntTSL 3 BASIC4.68□□□□□ -1.66
SLC44A4Q53GD3 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC4.68□□□□□ -1.66
SLC44A4Q53GD3 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC4.68□□□□□ -1.66
SLC44A4Q53GD3 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC4.68□□□□□ -1.66
SLC44A4Q53GD3 AC068276.1-201ENST00000605793 379 ntBASIC4.68□□□□□ -1.66
SLC44A4Q53GD3 AC097468.3-201ENST00000607956 456 ntBASIC4.68□□□□□ -1.66
SLC44A4Q53GD3 AC009318.4-201ENST00000620496 486 ntBASIC4.68□□□□□ -1.66
SLC44A4Q53GD3 MIR492-201ENST00000638676 116 ntBASIC4.68□□□□□ -1.66
SLC44A4Q53GD3 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
SLC44A4Q53GD3 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC4.68□□□□□ -1.66
SLC44A4Q53GD3 AC017104.4-201ENST00000636283 1592 ntBASIC4.68□□□□□ -1.66
SLC44A4Q53GD3 AC090971.4-201ENST00000560291 1800 ntBASIC4.67□□□□□ -1.66
SLC44A4Q53GD3 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
SLC44A4Q53GD3 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC4.67□□□□□ -1.66
SLC44A4Q53GD3 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
SLC44A4Q53GD3 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC4.67□□□□□ -1.66
SLC44A4Q53GD3 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
SLC44A4Q53GD3 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
SLC44A4Q53GD3 RNU1-108P-201ENST00000362556 161 ntBASIC4.67□□□□□ -1.66
SLC44A4Q53GD3 Y_RNA.97-201ENST00000363094 102 ntBASIC4.67□□□□□ -1.66
SLC44A4Q53GD3 RNU6-343P-201ENST00000364709 104 ntBASIC4.67□□□□□ -1.66
SLC44A4Q53GD3 RNU6-1283P-201ENST00000365314 105 ntBASIC4.67□□□□□ -1.66
SLC44A4Q53GD3 SNORD96B-201ENST00000386148 79 ntBASIC4.67□□□□□ -1.66
SLC44A4Q53GD3 RNA5SP317-201ENST00000410176 116 ntBASIC4.67□□□□□ -1.66
SLC44A4Q53GD3 RNA5SP311-201ENST00000411290 116 ntBASIC4.67□□□□□ -1.66
SLC44A4Q53GD3 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
SLC44A4Q53GD3 CKS1BP6-201ENST00000424932 240 ntBASIC4.67□□□□□ -1.66
SLC44A4Q53GD3 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC4.67□□□□□ -1.66
SLC44A4Q53GD3 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC4.67□□□□□ -1.66
SLC44A4Q53GD3 NEK4P1-201ENST00000433383 879 ntBASIC4.67□□□□□ -1.66
SLC44A4Q53GD3 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC4.67□□□□□ -1.66
SLC44A4Q53GD3 RPS3AP54-201ENST00000435535 734 ntBASIC4.67□□□□□ -1.66
SLC44A4Q53GD3 MTND4P25-201ENST00000441039 533 ntBASIC4.67□□□□□ -1.66
SLC44A4Q53GD3 MTND5P14-201ENST00000441481 1267 ntBASIC4.67□□□□□ -1.66
SLC44A4Q53GD3 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC4.67□□□□□ -1.66
SLC44A4Q53GD3 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC4.67□□□□□ -1.66
SLC44A4Q53GD3 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC4.67□□□□□ -1.66
SLC44A4Q53GD3 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC4.67□□□□□ -1.66
SLC44A4Q53GD3 TPT1P7-201ENST00000458300 517 ntBASIC4.67□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 220.9 ms