Protein–RNA interactions for Protein: Q12829

RAB40B, Ras-related protein Rab-40B, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40BQ12829 AC104985.3-201ENST00000623479 597 ntBASIC3.14□□□□□ -1.91
RAB40BQ12829 AC040168.1-201ENST00000623594 991 ntBASIC3.14□□□□□ -1.91
RAB40BQ12829 AC068724.3-201ENST00000625906 87 ntBASIC3.14□□□□□ -1.91
RAB40BQ12829 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC3.14□□□□□ -1.91
RAB40BQ12829 AL136084.2-203ENST00000630758 690 ntTSL 5 BASIC3.14□□□□□ -1.91
RAB40BQ12829 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
RAB40BQ12829 OFD1P5Y-201ENST00000447585 2590 ntBASIC3.14□□□□□ -1.91
RAB40BQ12829 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
RAB40BQ12829 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.14□□□□□ -1.91
RAB40BQ12829 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
RAB40BQ12829 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC3.14□□□□□ -1.91
RAB40BQ12829 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
RAB40BQ12829 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
RAB40BQ12829 AC017071.1-201ENST00000564407 2204 ntBASIC3.13□□□□□ -1.91
RAB40BQ12829 NUP58P1-201ENST00000502546 1738 ntBASIC3.13□□□□□ -1.91
RAB40BQ12829 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.13□□□□□ -1.91
RAB40BQ12829 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
RAB40BQ12829 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.13□□□□□ -1.91
RAB40BQ12829 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
RAB40BQ12829 AP005901.5-201ENST00000545779 1796 ntBASIC3.13□□□□□ -1.91
RAB40BQ12829 AC016769.3-201ENST00000396562 315 ntBASIC3.13□□□□□ -1.91
RAB40BQ12829 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
RAB40BQ12829 CRYBB2P1-203ENST00000415709 538 ntBASIC3.13□□□□□ -1.91
RAB40BQ12829 AIMP1P1-201ENST00000418670 937 ntBASIC3.13□□□□□ -1.91
RAB40BQ12829 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC3.13□□□□□ -1.91
RAB40BQ12829 OR8F1P-201ENST00000425243 930 ntBASIC3.13□□□□□ -1.91
RAB40BQ12829 AC092017.2-201ENST00000427600 362 ntBASIC3.13□□□□□ -1.91
RAB40BQ12829 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC3.13□□□□□ -1.91
RAB40BQ12829 VDAC1P3-201ENST00000434069 851 ntBASIC3.13□□□□□ -1.91
RAB40BQ12829 GTF2IP7-202ENST00000436677 309 ntBASIC3.13□□□□□ -1.91
RAB40BQ12829 ISCA1P2-201ENST00000438679 421 ntBASIC3.13□□□□□ -1.91
RAB40BQ12829 RPL21P133-201ENST00000443666 476 ntBASIC3.13□□□□□ -1.91
RAB40BQ12829 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC3.13□□□□□ -1.91
RAB40BQ12829 VN1R17P-201ENST00000472048 1090 ntBASIC3.13□□□□□ -1.91
RAB40BQ12829 ACTR3BP4-201ENST00000503033 1244 ntBASIC3.13□□□□□ -1.91
RAB40BQ12829 KLRA1P-201ENST00000503499 986 ntBASIC3.13□□□□□ -1.91
RAB40BQ12829 MTND3P3-201ENST00000505004 126 ntBASIC3.13□□□□□ -1.91
RAB40BQ12829 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC3.13□□□□□ -1.91
RAB40BQ12829 TBCA-206ENST00000518338 551 ntTSL 2 BASIC3.13□□□□□ -1.91
RAB40BQ12829 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC3.13□□□□□ -1.91
RAB40BQ12829 OR8R1P-201ENST00000543943 764 ntBASIC3.13□□□□□ -1.91
RAB40BQ12829 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC3.13□□□□□ -1.91
RAB40BQ12829 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC3.13□□□□□ -1.91
RAB40BQ12829 GTF2IP8-201ENST00000560687 584 ntBASIC3.13□□□□□ -1.91
RAB40BQ12829 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
RAB40BQ12829 AC138915.2-201ENST00000569776 97 ntBASIC3.13□□□□□ -1.91
RAB40BQ12829 AC012182.1-201ENST00000570133 895 ntBASIC3.13□□□□□ -1.91
RAB40BQ12829 MIR3160-1-201ENST00000577972 85 ntBASIC3.13□□□□□ -1.91
RAB40BQ12829 AC087499.8-201ENST00000578406 226 ntBASIC3.13□□□□□ -1.91
RAB40BQ12829 MIR3690-201ENST00000580266 75 ntBASIC3.13□□□□□ -1.91
RAB40BQ12829 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC3.13□□□□□ -1.91
RAB40BQ12829 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC3.13□□□□□ -1.91
RAB40BQ12829 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC3.13□□□□□ -1.91
RAB40BQ12829 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC3.13□□□□□ -1.91
RAB40BQ12829 AC128687.1-201ENST00000605304 619 ntBASIC3.13□□□□□ -1.91
RAB40BQ12829 AC024060.1-201ENST00000607052 494 ntBASIC3.13□□□□□ -1.91
RAB40BQ12829 AC009237.15-201ENST00000610252 501 ntBASIC3.13□□□□□ -1.91
RAB40BQ12829 AL590282.1-201ENST00000610379 1136 ntBASIC3.13□□□□□ -1.91
RAB40BQ12829 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
RAB40BQ12829 AC010975.3-201ENST00000618727 978 ntBASIC3.13□□□□□ -1.91
RAB40BQ12829 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC3.13□□□□□ -1.91
RAB40BQ12829 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
RAB40BQ12829 AC006963.1-201ENST00000624003 1052 ntBASIC3.13□□□□□ -1.91
RAB40BQ12829 RNA5SP196-201ENST00000625967 102 ntBASIC3.13□□□□□ -1.91
RAB40BQ12829 AC073476.4-201ENST00000628409 72 ntBASIC3.13□□□□□ -1.91
RAB40BQ12829 AC099654.8-201ENST00000637757 681 ntBASIC3.13□□□□□ -1.91
RAB40BQ12829 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
RAB40BQ12829 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC3.13□□□□□ -1.91
RAB40BQ12829 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
RAB40BQ12829 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC3.13□□□□□ -1.91
RAB40BQ12829 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
RAB40BQ12829 GDI2P1-201ENST00000429312 1336 ntBASIC3.13□□□□□ -1.91
RAB40BQ12829 MTND4P9-201ENST00000507819 1346 ntBASIC3.13□□□□□ -1.91
RAB40BQ12829 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
RAB40BQ12829 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
RAB40BQ12829 AF127577.6-201ENST00000623352 2191 ntBASIC3.12□□□□□ -1.91
RAB40BQ12829 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
RAB40BQ12829 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
RAB40BQ12829 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.12□□□□□ -1.91
RAB40BQ12829 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
RAB40BQ12829 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
RAB40BQ12829 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
RAB40BQ12829 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC3.12□□□□□ -1.91
RAB40BQ12829 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.12□□□□□ -1.91
RAB40BQ12829 PPIAP31-201ENST00000405422 495 ntBASIC3.12□□□□□ -1.91
RAB40BQ12829 AL356967.1-201ENST00000406305 431 ntBASIC3.12□□□□□ -1.91
RAB40BQ12829 AC126124.2-201ENST00000413542 321 ntBASIC3.12□□□□□ -1.91
RAB40BQ12829 LUZP4P1-201ENST00000415420 344 ntBASIC3.12□□□□□ -1.91
RAB40BQ12829 RAD23BP2-201ENST00000416003 1207 ntBASIC3.12□□□□□ -1.91
RAB40BQ12829 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC3.12□□□□□ -1.91
RAB40BQ12829 MTCO3P12-201ENST00000416718 547 ntBASIC3.12□□□□□ -1.91
RAB40BQ12829 AL449283.1-202ENST00000418249 604 ntBASIC3.12□□□□□ -1.91
RAB40BQ12829 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC3.12□□□□□ -1.91
RAB40BQ12829 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC3.12□□□□□ -1.91
RAB40BQ12829 AC007557.4-201ENST00000421907 430 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
RAB40BQ12829 RPF2P1-201ENST00000424137 906 ntBASIC3.12□□□□□ -1.91
RAB40BQ12829 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
RAB40BQ12829 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC3.12□□□□□ -1.91
RAB40BQ12829 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC3.12□□□□□ -1.91
RAB40BQ12829 OR4C10P-201ENST00000434991 931 ntBASIC3.12□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 87.3 ms