Protein–RNA interactions for Protein: Q12766

HMGXB3, HMG domain-containing protein 3, humanhuman

Predictions only

Length 1,538 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3Q12766 AP001004.1-201ENST00000582468 324 ntBASIC4.21□□□□□ -1.74
HMGXB3Q12766 OFD1P6Y-201ENST00000432335 1637 ntTSL 2 BASIC4.2□□□□□ -1.74
HMGXB3Q12766 TTTY9B-201ENST00000433794 1637 ntTSL 2 BASIC4.2□□□□□ -1.74
HMGXB3Q12766 GTF2H2B-203ENST00000508065 1432 ntBASIC4.2□□□□□ -1.74
HMGXB3Q12766 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.2□□□□□ -1.74
HMGXB3Q12766 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC4.2□□□□□ -1.74
HMGXB3Q12766 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC4.2□□□□□ -1.74
HMGXB3Q12766 AL121882.1-201ENST00000422893 417 ntBASIC4.2□□□□□ -1.74
HMGXB3Q12766 AC018634.1-201ENST00000437554 401 ntBASIC4.2□□□□□ -1.74
HMGXB3Q12766 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC4.2□□□□□ -1.74
HMGXB3Q12766 MTCO3P11-201ENST00000455103 774 ntBASIC4.2□□□□□ -1.74
HMGXB3Q12766 NIPA2P2-201ENST00000496376 1083 ntBASIC4.2□□□□□ -1.74
HMGXB3Q12766 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC4.2□□□□□ -1.74
HMGXB3Q12766 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC4.2□□□□□ -1.74
HMGXB3Q12766 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC4.2□□□□□ -1.74
HMGXB3Q12766 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC4.2□□□□□ -1.74
HMGXB3Q12766 MTND4P10-201ENST00000446199 1363 ntBASIC4.19□□□□□ -1.74
HMGXB3Q12766 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC4.19□□□□□ -1.74
HMGXB3Q12766 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC4.19□□□□□ -1.74
HMGXB3Q12766 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
HMGXB3Q12766 DEFB127-201ENST00000382388 514 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
HMGXB3Q12766 MIR137-201ENST00000385223 102 ntBASIC4.19□□□□□ -1.74
HMGXB3Q12766 RANP7-201ENST00000418085 644 ntBASIC4.19□□□□□ -1.74
HMGXB3Q12766 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC4.19□□□□□ -1.74
HMGXB3Q12766 LINC00888-204ENST00000487386 421 ntBASIC4.19□□□□□ -1.74
HMGXB3Q12766 AC026436.1-201ENST00000510537 270 ntBASIC4.19□□□□□ -1.74
HMGXB3Q12766 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC4.19□□□□□ -1.74
HMGXB3Q12766 AL451137.1-201ENST00000523363 443 ntTSL 3 BASIC4.19□□□□□ -1.74
HMGXB3Q12766 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC4.19□□□□□ -1.74
HMGXB3Q12766 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC4.19□□□□□ -1.74
HMGXB3Q12766 AC241377.1-201ENST00000619797 406 ntBASIC4.19□□□□□ -1.74
HMGXB3Q12766 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.18□□□□□ -1.74
HMGXB3Q12766 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
HMGXB3Q12766 RPL23AP48-201ENST00000406913 488 ntBASIC4.18□□□□□ -1.74
HMGXB3Q12766 AMD1P2-201ENST00000412936 992 ntBASIC4.18□□□□□ -1.74
HMGXB3Q12766 AC017078.1-201ENST00000416146 368 ntBASIC4.18□□□□□ -1.74
HMGXB3Q12766 AL592045.1-201ENST00000429867 352 ntBASIC4.18□□□□□ -1.74
HMGXB3Q12766 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
HMGXB3Q12766 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
HMGXB3Q12766 AC123904.3-201ENST00000547218 814 ntBASIC4.18□□□□□ -1.74
HMGXB3Q12766 MTCYBP28-201ENST00000566728 1132 ntBASIC4.18□□□□□ -1.74
HMGXB3Q12766 AC008121.2-201ENST00000614647 523 ntBASIC4.18□□□□□ -1.74
HMGXB3Q12766 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC4.18□□□□□ -1.74
HMGXB3Q12766 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
HMGXB3Q12766 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC4.18□□□□□ -1.74
HMGXB3Q12766 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
HMGXB3Q12766 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC4.17□□□□□ -1.74
HMGXB3Q12766 RNA5SP88-201ENST00000365560 109 ntBASIC4.17□□□□□ -1.74
HMGXB3Q12766 OFD1P1Y-201ENST00000411756 1225 ntBASIC4.17□□□□□ -1.74
HMGXB3Q12766 RPL23AP42-201ENST00000471152 471 ntBASIC4.17□□□□□ -1.74
HMGXB3Q12766 TXNP6-201ENST00000510190 310 ntBASIC4.17□□□□□ -1.74
HMGXB3Q12766 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC4.17□□□□□ -1.74
HMGXB3Q12766 AC067747.1-201ENST00000608026 250 ntBASIC4.17□□□□□ -1.74
HMGXB3Q12766 AC078899.5-201ENST00000612475 178 ntBASIC4.17□□□□□ -1.74
HMGXB3Q12766 MIR6873-201ENST00000622788 63 ntBASIC4.17□□□□□ -1.74
HMGXB3Q12766 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC4.16□□□□□ -1.74
HMGXB3Q12766 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
HMGXB3Q12766 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC4.16□□□□□ -1.74
HMGXB3Q12766 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
HMGXB3Q12766 RPL9P7-201ENST00000330965 580 ntBASIC4.16□□□□□ -1.74
HMGXB3Q12766 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
HMGXB3Q12766 ERMN-209ENST00000420719 1246 ntTSL 2 BASIC4.16□□□□□ -1.74
HMGXB3Q12766 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
HMGXB3Q12766 AL450263.2-201ENST00000439400 589 ntBASIC4.16□□□□□ -1.74
HMGXB3Q12766 AL024509.2-201ENST00000493462 493 ntBASIC4.16□□□□□ -1.74
HMGXB3Q12766 AC116337.1-201ENST00000509680 687 ntBASIC4.16□□□□□ -1.74
HMGXB3Q12766 AC112673.1-201ENST00000513168 575 ntBASIC4.16□□□□□ -1.74
HMGXB3Q12766 MEG8-218ENST00000556720 456 ntTSL 3 BASIC4.16□□□□□ -1.74
HMGXB3Q12766 AC025281.1-201ENST00000567026 265 ntBASIC4.16□□□□□ -1.74
HMGXB3Q12766 AC023813.4-201ENST00000607580 580 ntBASIC4.16□□□□□ -1.74
HMGXB3Q12766 AC103710.2-201ENST00000609912 942 ntBASIC4.16□□□□□ -1.74
HMGXB3Q12766 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
HMGXB3Q12766 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC4.16□□□□□ -1.74
HMGXB3Q12766 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC4.16□□□□□ -1.74
HMGXB3Q12766 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC4.16□□□□□ -1.74
HMGXB3Q12766 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC4.16□□□□□ -1.74
HMGXB3Q12766 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC4.16□□□□□ -1.74
HMGXB3Q12766 MIR181B1-201ENST00000385240 110 ntBASIC4.16□□□□□ -1.74
HMGXB3Q12766 MIR708-201ENST00000390708 88 ntBASIC4.16□□□□□ -1.74
HMGXB3Q12766 AL590004.2-201ENST00000404787 371 ntBASIC4.16□□□□□ -1.74
HMGXB3Q12766 AC010881.1-201ENST00000433830 235 ntBASIC4.16□□□□□ -1.74
HMGXB3Q12766 RPL23AP70-201ENST00000483361 460 ntBASIC4.16□□□□□ -1.74
HMGXB3Q12766 AC108860.1-201ENST00000484521 383 ntBASIC4.16□□□□□ -1.74
HMGXB3Q12766 KCTD9P5-201ENST00000504141 1170 ntBASIC4.16□□□□□ -1.74
HMGXB3Q12766 VPS8-228ENST00000628962 207 ntTSL 5 BASIC4.16□□□□□ -1.74
HMGXB3Q12766 AL512643.1-201ENST00000635735 524 ntBASIC4.16□□□□□ -1.74
HMGXB3Q12766 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC4.15□□□□□ -1.74
HMGXB3Q12766 USP44-208ENST00000552440 1818 ntTSL 5 BASIC4.15□□□□□ -1.74
HMGXB3Q12766 AC011460.1-201ENST00000636268 1834 ntBASIC4.15□□□□□ -1.74
HMGXB3Q12766 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC4.15□□□□□ -1.75
HMGXB3Q12766 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
HMGXB3Q12766 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC4.15□□□□□ -1.75
HMGXB3Q12766 Y_RNA.40-201ENST00000362645 93 ntBASIC4.15□□□□□ -1.75
HMGXB3Q12766 MRRF-203ENST00000373723 1176 ntTSL 3 BASIC4.15□□□□□ -1.75
HMGXB3Q12766 AL162578.1-201ENST00000406202 378 ntBASIC4.15□□□□□ -1.75
HMGXB3Q12766 HMGB1P48-201ENST00000446155 598 ntBASIC4.15□□□□□ -1.75
HMGXB3Q12766 CREM-226ENST00000469949 721 ntTSL 3 BASIC4.15□□□□□ -1.75
HMGXB3Q12766 AP000926.3-201ENST00000497201 299 ntBASIC4.15□□□□□ -1.75
HMGXB3Q12766 RNU6-1231P-201ENST00000517185 103 ntBASIC4.15□□□□□ -1.75
HMGXB3Q12766 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 92.8 ms