Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
PCDH1Q08174 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
PCDH1Q08174 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC5.46□□□□□ -1.54
PCDH1Q08174 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC5.46□□□□□ -1.54
PCDH1Q08174 AC026523.2-201ENST00000625039 7739 ntBASIC5.46□□□□□ -1.54
PCDH1Q08174 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC5.46□□□□□ -1.54
PCDH1Q08174 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC5.46□□□□□ -1.54
PCDH1Q08174 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC5.46□□□□□ -1.54
PCDH1Q08174 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
PCDH1Q08174 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
PCDH1Q08174 SNORD115-7-201ENST00000365306 82 ntBASIC5.46□□□□□ -1.54
PCDH1Q08174 Y_RNA.482-201ENST00000384377 111 ntBASIC5.46□□□□□ -1.54
PCDH1Q08174 AL139397.2-201ENST00000404529 772 ntBASIC5.46□□□□□ -1.54
PCDH1Q08174 RNU2-36P-201ENST00000410361 191 ntBASIC5.46□□□□□ -1.54
PCDH1Q08174 AC096921.1-201ENST00000411661 375 ntBASIC5.46□□□□□ -1.54
PCDH1Q08174 RPS12P24-201ENST00000412619 387 ntBASIC5.46□□□□□ -1.54
PCDH1Q08174 VDAC1P9-201ENST00000412766 841 ntBASIC5.46□□□□□ -1.54
PCDH1Q08174 BX323845.3-201ENST00000428215 527 ntBASIC5.46□□□□□ -1.54
PCDH1Q08174 AL389925.1-201ENST00000432257 728 ntBASIC5.46□□□□□ -1.54
PCDH1Q08174 FTLP19-201ENST00000433300 394 ntBASIC5.46□□□□□ -1.54
PCDH1Q08174 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC5.46□□□□□ -1.54
PCDH1Q08174 AL137186.1-201ENST00000440436 480 ntTSL 3 BASIC5.46□□□□□ -1.54
PCDH1Q08174 EEF1A1P1-201ENST00000447052 739 ntBASIC5.46□□□□□ -1.54
PCDH1Q08174 MTCO3P10-201ENST00000455912 772 ntBASIC5.46□□□□□ -1.54
PCDH1Q08174 RN7SL197P-201ENST00000466981 299 ntBASIC5.46□□□□□ -1.54
PCDH1Q08174 AC022215.1-201ENST00000481770 362 ntBASIC5.46□□□□□ -1.54
PCDH1Q08174 RPL32P33-201ENST00000487023 394 ntBASIC5.46□□□□□ -1.54
PCDH1Q08174 MTCO2P24-201ENST00000515611 426 ntBASIC5.46□□□□□ -1.54
PCDH1Q08174 RNU6-976P-201ENST00000516086 111 ntBASIC5.46□□□□□ -1.54
PCDH1Q08174 IGLV3-24-201ENST00000517477 197 ntBASIC5.46□□□□□ -1.54
PCDH1Q08174 AL133271.1-201ENST00000538229 291 ntBASIC5.46□□□□□ -1.54
PCDH1Q08174 AC122688.1-201ENST00000541494 223 ntBASIC5.46□□□□□ -1.54
PCDH1Q08174 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC5.46□□□□□ -1.54
PCDH1Q08174 MIR4680-201ENST00000580906 66 ntBASIC5.46□□□□□ -1.54
PCDH1Q08174 AC024619.4-201ENST00000580924 316 ntBASIC5.46□□□□□ -1.54
PCDH1Q08174 AC069061.3-201ENST00000582254 823 ntBASIC5.46□□□□□ -1.54
PCDH1Q08174 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC5.46□□□□□ -1.54
PCDH1Q08174 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC5.46□□□□□ -1.54
PCDH1Q08174 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC5.46□□□□□ -1.54
PCDH1Q08174 AC092747.3-201ENST00000603769 301 ntBASIC5.46□□□□□ -1.54
PCDH1Q08174 AC006363.1-201ENST00000603806 463 ntBASIC5.46□□□□□ -1.54
PCDH1Q08174 AC025588.3-201ENST00000604182 274 ntBASIC5.46□□□□□ -1.54
PCDH1Q08174 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC5.46□□□□□ -1.54
PCDH1Q08174 AC083806.3-201ENST00000614016 455 ntBASIC5.46□□□□□ -1.54
PCDH1Q08174 AL391425.1-202ENST00000617518 774 ntTSL 5 BASIC5.46□□□□□ -1.54
PCDH1Q08174 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC5.46□□□□□ -1.54
PCDH1Q08174 NEK3-211ENST00000629912 141 ntTSL 5 BASIC5.46□□□□□ -1.54
PCDH1Q08174 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC5.46□□□□□ -1.54
PCDH1Q08174 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
PCDH1Q08174 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC5.46□□□□□ -1.54
PCDH1Q08174 ALB-202ENST00000401494 1659 ntTSL 5 BASIC5.46□□□□□ -1.54
PCDH1Q08174 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.54
PCDH1Q08174 OR13C1P-202ENST00000641378 2919 ntBASIC5.46□□□□□ -1.54
PCDH1Q08174 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC5.46□□□□□ -1.54
PCDH1Q08174 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
PCDH1Q08174 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC5.46□□□□□ -1.54
PCDH1Q08174 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
PCDH1Q08174 BDP1P-201ENST00000582658 1990 ntBASIC5.46□□□□□ -1.54
PCDH1Q08174 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
PCDH1Q08174 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
PCDH1Q08174 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC5.45□□□□□ -1.54
PCDH1Q08174 AC005005.4-201ENST00000623789 16698 ntBASIC5.45□□□□□ -1.54
PCDH1Q08174 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
PCDH1Q08174 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
PCDH1Q08174 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC5.45□□□□□ -1.54
PCDH1Q08174 Y_RNA.212-201ENST00000364177 102 ntBASIC5.45□□□□□ -1.54
PCDH1Q08174 RNU6-1318P-201ENST00000365389 103 ntBASIC5.45□□□□□ -1.54
PCDH1Q08174 RNU5E-6P-201ENST00000365574 115 ntBASIC5.45□□□□□ -1.54
PCDH1Q08174 RNU4-2-201ENST00000365668 141 ntBASIC5.45□□□□□ -1.54
PCDH1Q08174 SNORA5.1-201ENST00000384275 131 ntBASIC5.45□□□□□ -1.54
PCDH1Q08174 RNU6-954P-201ENST00000411355 107 ntBASIC5.45□□□□□ -1.54
PCDH1Q08174 POLHP1-201ENST00000411806 470 ntBASIC5.45□□□□□ -1.54
PCDH1Q08174 HMGN1P20-201ENST00000411849 300 ntBASIC5.45□□□□□ -1.54
PCDH1Q08174 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC5.45□□□□□ -1.54
PCDH1Q08174 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC5.45□□□□□ -1.54
PCDH1Q08174 MTCYBP10-201ENST00000424905 650 ntBASIC5.45□□□□□ -1.54
PCDH1Q08174 SKA2P1-201ENST00000425592 390 ntBASIC5.45□□□□□ -1.54
PCDH1Q08174 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC5.45□□□□□ -1.54
PCDH1Q08174 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC5.45□□□□□ -1.54
PCDH1Q08174 TMEM183AP1-205ENST00000432739 290 ntBASIC5.45□□□□□ -1.54
PCDH1Q08174 AC138761.5-201ENST00000433967 325 ntBASIC5.45□□□□□ -1.54
PCDH1Q08174 AL035666.1-201ENST00000446195 348 ntBASIC5.45□□□□□ -1.54
PCDH1Q08174 MTND1P17-201ENST00000448961 204 ntBASIC5.45□□□□□ -1.54
PCDH1Q08174 AC010733.1-201ENST00000451515 401 ntBASIC5.45□□□□□ -1.54
PCDH1Q08174 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC5.45□□□□□ -1.54
PCDH1Q08174 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC5.45□□□□□ -1.54
PCDH1Q08174 NXT1P1-201ENST00000458481 316 ntBASIC5.45□□□□□ -1.54
PCDH1Q08174 AC022034.3-201ENST00000471393 478 ntBASIC5.45□□□□□ -1.54
PCDH1Q08174 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC5.45□□□□□ -1.54
PCDH1Q08174 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC5.45□□□□□ -1.54
PCDH1Q08174 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC5.45□□□□□ -1.54
PCDH1Q08174 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC5.45□□□□□ -1.54
PCDH1Q08174 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC5.45□□□□□ -1.54
PCDH1Q08174 AC027026.1-201ENST00000532323 742 ntBASIC5.45□□□□□ -1.54
PCDH1Q08174 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC5.45□□□□□ -1.54
PCDH1Q08174 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC5.45□□□□□ -1.54
PCDH1Q08174 AC130371.1-201ENST00000577023 230 ntTSL 5 BASIC5.45□□□□□ -1.54
PCDH1Q08174 AL355598.1-201ENST00000604169 202 ntBASIC5.45□□□□□ -1.54
PCDH1Q08174 AL627230.1-201ENST00000613077 211 ntBASIC5.45□□□□□ -1.54
PCDH1Q08174 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC5.45□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 102.2 ms