Protein–RNA interactions for Protein: Q07654

TFF3, Trefoil factor 3, humanhuman

Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TFF3Q07654 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC2.25□□□□□ -2.05
TFF3Q07654 BNIP3P10-201ENST00000605360 577 ntBASIC2.25□□□□□ -2.05
TFF3Q07654 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.24□□□□□ -2.05
TFF3Q07654 OFD1P6Y-201ENST00000432335 1637 ntTSL 2 BASIC2.24□□□□□ -2.05
TFF3Q07654 TTTY9B-201ENST00000433794 1637 ntTSL 2 BASIC2.24□□□□□ -2.05
TFF3Q07654 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC2.24□□□□□ -2.05
TFF3Q07654 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC2.24□□□□□ -2.05
TFF3Q07654 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
TFF3Q07654 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
TFF3Q07654 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC2.24□□□□□ -2.05
TFF3Q07654 RPL23AP74-201ENST00000437246 471 ntBASIC2.24□□□□□ -2.05
TFF3Q07654 AL590399.6-201ENST00000446396 307 ntBASIC2.24□□□□□ -2.05
TFF3Q07654 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
TFF3Q07654 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
TFF3Q07654 AC008571.1-201ENST00000467232 300 ntBASIC2.24□□□□□ -2.05
TFF3Q07654 AC016687.1-201ENST00000482574 353 ntBASIC2.24□□□□□ -2.05
TFF3Q07654 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC2.24□□□□□ -2.05
TFF3Q07654 AC084024.3-201ENST00000520598 562 ntTSL 4 BASIC2.24□□□□□ -2.05
TFF3Q07654 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC2.24□□□□□ -2.05
TFF3Q07654 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC2.24□□□□□ -2.05
TFF3Q07654 GOLGA8M-203ENST00000568033 557 ntTSL 4 BASIC2.24□□□□□ -2.05
TFF3Q07654 VN1R78P-201ENST00000597393 564 ntBASIC2.24□□□□□ -2.05
TFF3Q07654 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC2.24□□□□□ -2.05
TFF3Q07654 LINC00458-206ENST00000607494 849 ntTSL 3 BASIC2.24□□□□□ -2.05
TFF3Q07654 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC2.24□□□□□ -2.05
TFF3Q07654 RFC1-217ENST00000639695 867 ntTSL 5 BASIC2.24□□□□□ -2.05
TFF3Q07654 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.24□□□□□ -2.05
TFF3Q07654 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
TFF3Q07654 AC138915.3-201ENST00000562908 1389 ntBASIC2.23□□□□□ -2.05
TFF3Q07654 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
TFF3Q07654 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
TFF3Q07654 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
TFF3Q07654 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC2.23□□□□□ -2.05
TFF3Q07654 AC117529.2-201ENST00000512159 2068 ntBASIC2.23□□□□□ -2.05
TFF3Q07654 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC2.23□□□□□ -2.05
TFF3Q07654 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC2.23□□□□□ -2.05
TFF3Q07654 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
TFF3Q07654 RNU6-618P-201ENST00000363518 112 ntBASIC2.23□□□□□ -2.05
TFF3Q07654 AL590290.1-201ENST00000405336 380 ntBASIC2.23□□□□□ -2.05
TFF3Q07654 TOMM20P4-201ENST00000427861 435 ntBASIC2.23□□□□□ -2.05
TFF3Q07654 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC2.23□□□□□ -2.05
TFF3Q07654 AL606490.7-201ENST00000433136 191 ntBASIC2.23□□□□□ -2.05
TFF3Q07654 AC011816.1-201ENST00000441346 546 ntBASIC2.23□□□□□ -2.05
TFF3Q07654 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC2.23□□□□□ -2.05
TFF3Q07654 RAD51AP1P1-201ENST00000484195 1001 ntBASIC2.23□□□□□ -2.05
TFF3Q07654 AC093663.2-201ENST00000484625 313 ntBASIC2.23□□□□□ -2.05
TFF3Q07654 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC2.23□□□□□ -2.05
TFF3Q07654 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC2.23□□□□□ -2.05
TFF3Q07654 EEF1A1P37-201ENST00000522748 715 ntBASIC2.23□□□□□ -2.05
TFF3Q07654 IGKV3-31-201ENST00000523109 329 ntBASIC2.23□□□□□ -2.05
TFF3Q07654 OR8L1P-201ENST00000534005 955 ntBASIC2.23□□□□□ -2.05
TFF3Q07654 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC2.23□□□□□ -2.05
TFF3Q07654 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC2.23□□□□□ -2.05
TFF3Q07654 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC2.23□□□□□ -2.05
TFF3Q07654 MIR4524B-201ENST00000581569 115 ntBASIC2.23□□□□□ -2.05
TFF3Q07654 MIR4769-201ENST00000584126 77 ntBASIC2.23□□□□□ -2.05
TFF3Q07654 AL356274.1-201ENST00000617064 410 ntBASIC2.23□□□□□ -2.05
TFF3Q07654 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC2.23□□□□□ -2.05
TFF3Q07654 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
TFF3Q07654 AC092447.7-201ENST00000422212 1621 ntBASIC2.23□□□□□ -2.05
TFF3Q07654 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.23□□□□□ -2.05
TFF3Q07654 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
TFF3Q07654 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC2.23□□□□□ -2.05
TFF3Q07654 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
TFF3Q07654 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
TFF3Q07654 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC2.22□□□□□ -2.05
TFF3Q07654 AC091152.2-201ENST00000591628 2569 ntBASIC2.22□□□□□ -2.05
TFF3Q07654 AC022826.2-201ENST00000358757 776 ntAPPRIS P1 TSL 4 BASIC2.22□□□□□ -2.05
TFF3Q07654 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.22□□□□□ -2.05
TFF3Q07654 RNA5SP425-201ENST00000410336 112 ntBASIC2.22□□□□□ -2.05
TFF3Q07654 RN7SKP223-201ENST00000410582 62 ntBASIC2.22□□□□□ -2.05
TFF3Q07654 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC2.22□□□□□ -2.05
TFF3Q07654 AC092013.1-201ENST00000438795 332 ntBASIC2.22□□□□□ -2.05
TFF3Q07654 WASF1P1-201ENST00000447560 1131 ntBASIC2.22□□□□□ -2.05
TFF3Q07654 RNU6-826P-201ENST00000516827 104 ntBASIC2.22□□□□□ -2.05
TFF3Q07654 AL355836.1-201ENST00000555951 870 ntBASIC2.22□□□□□ -2.05
TFF3Q07654 AC009063.1-201ENST00000563342 702 ntBASIC2.22□□□□□ -2.05
TFF3Q07654 NF1P5-201ENST00000588287 448 ntBASIC2.22□□□□□ -2.05
TFF3Q07654 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC2.22□□□□□ -2.05
TFF3Q07654 AL158827.2-201ENST00000602494 330 ntBASIC2.22□□□□□ -2.05
TFF3Q07654 AC098826.3-201ENST00000603823 466 ntBASIC2.22□□□□□ -2.05
TFF3Q07654 AP000787.2-201ENST00000604432 568 ntBASIC2.22□□□□□ -2.05
TFF3Q07654 AC007423.1-201ENST00000605009 627 ntBASIC2.22□□□□□ -2.05
TFF3Q07654 5S_rRNA.12-201ENST00000617631 107 ntBASIC2.22□□□□□ -2.05
TFF3Q07654 CR381653.2-201ENST00000624041 768 ntBASIC2.22□□□□□ -2.05
TFF3Q07654 AC048347.1-201ENST00000624621 427 ntBASIC2.22□□□□□ -2.05
TFF3Q07654 AL691447.3-201ENST00000635020 330 ntBASIC2.22□□□□□ -2.05
TFF3Q07654 AC000367.1-201ENST00000452711 1766 ntBASIC2.22□□□□□ -2.05
TFF3Q07654 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
TFF3Q07654 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
TFF3Q07654 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC2.21□□□□□ -2.06
TFF3Q07654 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
TFF3Q07654 AC009313.2-201ENST00000417893 1941 ntBASIC2.21□□□□□ -2.06
TFF3Q07654 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC2.21□□□□□ -2.06
TFF3Q07654 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
TFF3Q07654 SNORA26.7-201ENST00000391288 122 ntBASIC2.21□□□□□ -2.06
TFF3Q07654 CYCSP45-201ENST00000402289 315 ntBASIC2.21□□□□□ -2.06
TFF3Q07654 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
TFF3Q07654 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC2.21□□□□□ -2.06
TFF3Q07654 AL135786.1-201ENST00000415892 214 ntBASIC2.21□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 111.6 ms