Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.08□□□□□ -1.92
HMGCS1Q01581 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC3.08□□□□□ -1.92
HMGCS1Q01581 ZNF849P-201ENST00000594711 1566 ntBASIC3.08□□□□□ -1.92
HMGCS1Q01581 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.08□□□□□ -1.92
HMGCS1Q01581 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
HMGCS1Q01581 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.07□□□□□ -1.92
HMGCS1Q01581 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.07□□□□□ -1.92
HMGCS1Q01581 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
HMGCS1Q01581 U3.6-201ENST00000363622 211 ntBASIC3.07□□□□□ -1.92
HMGCS1Q01581 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
HMGCS1Q01581 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
HMGCS1Q01581 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC3.07□□□□□ -1.92
HMGCS1Q01581 AC007899.1-201ENST00000412776 775 ntBASIC3.07□□□□□ -1.92
HMGCS1Q01581 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC3.07□□□□□ -1.92
HMGCS1Q01581 HMGB3P23-201ENST00000414981 585 ntBASIC3.07□□□□□ -1.92
HMGCS1Q01581 AC005517.2-201ENST00000424673 553 ntBASIC3.07□□□□□ -1.92
HMGCS1Q01581 AL451062.2-201ENST00000427515 271 ntBASIC3.07□□□□□ -1.92
HMGCS1Q01581 AP000477.1-202ENST00000434859 847 ntTSL 3 BASIC3.07□□□□□ -1.92
HMGCS1Q01581 FTH1P1-201ENST00000437933 532 ntBASIC3.07□□□□□ -1.92
HMGCS1Q01581 HMGB1P12-201ENST00000438594 598 ntBASIC3.07□□□□□ -1.92
HMGCS1Q01581 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC3.07□□□□□ -1.92
HMGCS1Q01581 RAB11AP1-201ENST00000442978 646 ntBASIC3.07□□□□□ -1.92
HMGCS1Q01581 AL929288.2-201ENST00000446368 407 ntBASIC3.07□□□□□ -1.92
HMGCS1Q01581 RPS27P29-201ENST00000463110 252 ntBASIC3.07□□□□□ -1.92
HMGCS1Q01581 AL049829.1-201ENST00000465411 156 ntBASIC3.07□□□□□ -1.92
HMGCS1Q01581 AC034236.1-201ENST00000469891 373 ntBASIC3.07□□□□□ -1.92
HMGCS1Q01581 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC3.07□□□□□ -1.92
HMGCS1Q01581 ST13P14-201ENST00000474095 734 ntBASIC3.07□□□□□ -1.92
HMGCS1Q01581 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC3.07□□□□□ -1.92
HMGCS1Q01581 RPS27P23-201ENST00000487608 251 ntBASIC3.07□□□□□ -1.92
HMGCS1Q01581 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
HMGCS1Q01581 AC008885.2-201ENST00000509506 930 ntBASIC3.07□□□□□ -1.92
HMGCS1Q01581 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.07□□□□□ -1.92
HMGCS1Q01581 RN7SKP96-201ENST00000516948 297 ntBASIC3.07□□□□□ -1.92
HMGCS1Q01581 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC3.07□□□□□ -1.92
HMGCS1Q01581 MTCYBP41-201ENST00000528913 1123 ntBASIC3.07□□□□□ -1.92
HMGCS1Q01581 AC010198.2-201ENST00000550612 259 ntBASIC3.07□□□□□ -1.92
HMGCS1Q01581 AC011611.5-201ENST00000552477 578 ntBASIC3.07□□□□□ -1.92
HMGCS1Q01581 MIR2682-201ENST00000580305 110 ntBASIC3.07□□□□□ -1.92
HMGCS1Q01581 ZNF415P1-201ENST00000582279 1166 ntBASIC3.07□□□□□ -1.92
HMGCS1Q01581 AC008687.2-201ENST00000597865 520 ntBASIC3.07□□□□□ -1.92
HMGCS1Q01581 uc_338.25-201ENST00000613756 156 ntBASIC3.07□□□□□ -1.92
HMGCS1Q01581 AC009464.1-201ENST00000615731 469 ntBASIC3.07□□□□□ -1.92
HMGCS1Q01581 AC078880.5-201ENST00000617845 421 ntBASIC3.07□□□□□ -1.92
HMGCS1Q01581 AC004777.1-201ENST00000624317 287 ntBASIC3.07□□□□□ -1.92
HMGCS1Q01581 C8orf89-203ENST00000625134 507 ntAPPRIS ALT2 TSL 1 (best) BASIC3.07□□□□□ -1.92
HMGCS1Q01581 AL356118.1-201ENST00000635272 1078 ntBASIC3.07□□□□□ -1.92
HMGCS1Q01581 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
HMGCS1Q01581 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC3.07□□□□□ -1.92
HMGCS1Q01581 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC3.07□□□□□ -1.92
HMGCS1Q01581 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.07□□□□□ -1.92
HMGCS1Q01581 AC093908.1-201ENST00000623125 8092 ntBASIC3.06□□□□□ -1.92
HMGCS1Q01581 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
HMGCS1Q01581 RNU6-335P-201ENST00000364563 113 ntBASIC3.06□□□□□ -1.92
HMGCS1Q01581 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
HMGCS1Q01581 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC3.06□□□□□ -1.92
HMGCS1Q01581 MIR525-201ENST00000384978 85 ntBASIC3.06□□□□□ -1.92
HMGCS1Q01581 MIR34B-201ENST00000385076 84 ntBASIC3.06□□□□□ -1.92
HMGCS1Q01581 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
HMGCS1Q01581 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC3.06□□□□□ -1.92
HMGCS1Q01581 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC3.06□□□□□ -1.92
HMGCS1Q01581 PAICSP7-201ENST00000419829 962 ntBASIC3.06□□□□□ -1.92
HMGCS1Q01581 AL513128.1-201ENST00000422675 469 ntTSL 5 BASIC3.06□□□□□ -1.92
HMGCS1Q01581 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC3.06□□□□□ -1.92
HMGCS1Q01581 AL590103.1-201ENST00000434488 307 ntBASIC3.06□□□□□ -1.92
HMGCS1Q01581 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC3.06□□□□□ -1.92
HMGCS1Q01581 B3GNT2P1-201ENST00000434960 952 ntBASIC3.06□□□□□ -1.92
HMGCS1Q01581 AC011196.1-201ENST00000451816 595 ntTSL 2 BASIC3.06□□□□□ -1.92
HMGCS1Q01581 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC3.06□□□□□ -1.92
HMGCS1Q01581 PTGES3P5-201ENST00000455109 434 ntBASIC3.06□□□□□ -1.92
HMGCS1Q01581 RPS4XP10-201ENST00000465034 731 ntBASIC3.06□□□□□ -1.92
HMGCS1Q01581 RPL7P49-201ENST00000471402 708 ntBASIC3.06□□□□□ -1.92
HMGCS1Q01581 VN1R17P-201ENST00000472048 1090 ntBASIC3.06□□□□□ -1.92
HMGCS1Q01581 HMGB1P38-201ENST00000490557 577 ntBASIC3.06□□□□□ -1.92
HMGCS1Q01581 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
HMGCS1Q01581 KCTD9P5-201ENST00000504141 1170 ntBASIC3.06□□□□□ -1.92
HMGCS1Q01581 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC3.06□□□□□ -1.92
HMGCS1Q01581 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC3.06□□□□□ -1.92
HMGCS1Q01581 AC016065.2-201ENST00000514530 444 ntBASIC3.06□□□□□ -1.92
HMGCS1Q01581 RNU6-416P-201ENST00000516265 103 ntBASIC3.06□□□□□ -1.92
HMGCS1Q01581 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC3.06□□□□□ -1.92
HMGCS1Q01581 RPL12P22-201ENST00000519073 490 ntBASIC3.06□□□□□ -1.92
HMGCS1Q01581 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC3.06□□□□□ -1.92
HMGCS1Q01581 AF279873.1-201ENST00000523393 313 ntBASIC3.06□□□□□ -1.92
HMGCS1Q01581 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC3.06□□□□□ -1.92
HMGCS1Q01581 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC3.06□□□□□ -1.92
HMGCS1Q01581 LYZ-203ENST00000549690 669 ntTSL 2 BASIC3.06□□□□□ -1.92
HMGCS1Q01581 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC3.06□□□□□ -1.92
HMGCS1Q01581 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC3.06□□□□□ -1.92
HMGCS1Q01581 AC005412.1-201ENST00000580812 1049 ntBASIC3.06□□□□□ -1.92
HMGCS1Q01581 MIR3944-201ENST00000581277 108 ntBASIC3.06□□□□□ -1.92
HMGCS1Q01581 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC3.06□□□□□ -1.92
HMGCS1Q01581 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC3.06□□□□□ -1.92
HMGCS1Q01581 AC091488.1-201ENST00000604239 660 ntBASIC3.06□□□□□ -1.92
HMGCS1Q01581 AC073657.2-201ENST00000605661 303 ntBASIC3.06□□□□□ -1.92
HMGCS1Q01581 AF230666.1-202ENST00000608375 870 ntTSL 5 BASIC3.06□□□□□ -1.92
HMGCS1Q01581 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC3.06□□□□□ -1.92
HMGCS1Q01581 AL354976.1-201ENST00000613843 387 ntBASIC3.06□□□□□ -1.92
HMGCS1Q01581 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC3.06□□□□□ -1.92
HMGCS1Q01581 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC3.05□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 99.9 ms