Protein–RNA interactions for Protein: P78363

ABCA4, Retinal-specific ATP-binding cassette transporter, humanhuman

Predictions only

Length 2,273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4P78363 UBTFL10-201ENST00000528532 562 ntBASIC2.28□□□□□ -2.05
ABCA4P78363 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC2.28□□□□□ -2.05
ABCA4P78363 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.28□□□□□ -2.05
ABCA4P78363 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC2.27□□□□□ -2.05
ABCA4P78363 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
ABCA4P78363 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC2.27□□□□□ -2.05
ABCA4P78363 5S_rRNA.2-201ENST00000391293 112 ntBASIC2.27□□□□□ -2.05
ABCA4P78363 RNU6-603P-201ENST00000411403 107 ntBASIC2.27□□□□□ -2.05
ABCA4P78363 RAB9AP5-201ENST00000437794 597 ntBASIC2.27□□□□□ -2.05
ABCA4P78363 RAB9AP2-201ENST00000443911 597 ntBASIC2.27□□□□□ -2.05
ABCA4P78363 WASF1P1-201ENST00000447560 1131 ntBASIC2.27□□□□□ -2.05
ABCA4P78363 CACYBPP2-201ENST00000453625 678 ntBASIC2.27□□□□□ -2.05
ABCA4P78363 AP002371.1-201ENST00000463604 433 ntBASIC2.27□□□□□ -2.05
ABCA4P78363 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC2.27□□□□□ -2.05
ABCA4P78363 AC025181.1-201ENST00000477507 416 ntBASIC2.27□□□□□ -2.05
ABCA4P78363 AC126121.1-201ENST00000482313 553 ntBASIC2.27□□□□□ -2.05
ABCA4P78363 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC2.27□□□□□ -2.05
ABCA4P78363 CBX3P5-201ENST00000552017 521 ntBASIC2.27□□□□□ -2.05
ABCA4P78363 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC2.27□□□□□ -2.05
ABCA4P78363 AGGF1P8-201ENST00000562979 1000 ntBASIC2.27□□□□□ -2.05
ABCA4P78363 AL591516.1-201ENST00000611326 274 ntBASIC2.27□□□□□ -2.05
ABCA4P78363 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC2.27□□□□□ -2.05
ABCA4P78363 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC2.27□□□□□ -2.05
ABCA4P78363 CR381653.2-201ENST00000624041 768 ntBASIC2.27□□□□□ -2.05
ABCA4P78363 AC092608.2-201ENST00000624427 218 ntBASIC2.27□□□□□ -2.05
ABCA4P78363 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC2.27□□□□□ -2.05
ABCA4P78363 MTCO1P9-201ENST00000505577 1534 ntBASIC2.27□□□□□ -2.05
ABCA4P78363 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC2.27□□□□□ -2.05
ABCA4P78363 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC2.27□□□□□ -2.05
ABCA4P78363 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC2.26□□□□□ -2.05
ABCA4P78363 RNU6-482P-201ENST00000391068 107 ntBASIC2.26□□□□□ -2.05
ABCA4P78363 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC2.26□□□□□ -2.05
ABCA4P78363 MRPL50P2-201ENST00000416821 482 ntBASIC2.26□□□□□ -2.05
ABCA4P78363 AL049610.1-201ENST00000423374 372 ntBASIC2.26□□□□□ -2.05
ABCA4P78363 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
ABCA4P78363 HMGB1P25-201ENST00000468402 607 ntBASIC2.26□□□□□ -2.05
ABCA4P78363 AC010627.1-201ENST00000503819 1294 ntBASIC2.26□□□□□ -2.05
ABCA4P78363 LINC01603-201ENST00000517343 1134 ntTSL 2 BASIC2.26□□□□□ -2.05
ABCA4P78363 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC2.26□□□□□ -2.05
ABCA4P78363 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC2.26□□□□□ -2.05
ABCA4P78363 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC2.26□□□□□ -2.05
ABCA4P78363 AC009063.1-201ENST00000563342 702 ntBASIC2.26□□□□□ -2.05
ABCA4P78363 AC022960.2-201ENST00000616300 666 ntBASIC2.26□□□□□ -2.05
ABCA4P78363 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC2.26□□□□□ -2.05
ABCA4P78363 METTL8-218ENST00000638989 876 ntTSL 5 BASIC2.26□□□□□ -2.05
ABCA4P78363 METTL8-219ENST00000640734 726 ntTSL 2 BASIC2.26□□□□□ -2.05
ABCA4P78363 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.26□□□□□ -2.05
ABCA4P78363 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
ABCA4P78363 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC2.26□□□□□ -2.05
ABCA4P78363 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
ABCA4P78363 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC2.26□□□□□ -2.05
ABCA4P78363 AC073464.3-201ENST00000422564 712 ntBASIC2.26□□□□□ -2.05
ABCA4P78363 AL356320.1-201ENST00000429616 163 ntBASIC2.26□□□□□ -2.05
ABCA4P78363 MTCO3P21-201ENST00000430791 643 ntBASIC2.26□□□□□ -2.05
ABCA4P78363 C4orf45-201ENST00000434826 1215 ntAPPRIS P1 TSL 2 BASIC2.26□□□□□ -2.05
ABCA4P78363 RNU7-170P-201ENST00000459303 61 ntBASIC2.26□□□□□ -2.05
ABCA4P78363 RPL9P32-201ENST00000464118 620 ntBASIC2.26□□□□□ -2.05
ABCA4P78363 AC012170.1-201ENST00000495139 359 ntBASIC2.26□□□□□ -2.05
ABCA4P78363 AC068305.1-201ENST00000497406 726 ntBASIC2.26□□□□□ -2.05
ABCA4P78363 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC2.26□□□□□ -2.05
ABCA4P78363 CKS1BP1-201ENST00000555221 240 ntBASIC2.26□□□□□ -2.05
ABCA4P78363 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC2.26□□□□□ -2.05
ABCA4P78363 MIR4458-201ENST00000578872 75 ntBASIC2.26□□□□□ -2.05
ABCA4P78363 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC2.26□□□□□ -2.05
ABCA4P78363 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC2.26□□□□□ -2.05
ABCA4P78363 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC2.26□□□□□ -2.05
ABCA4P78363 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
ABCA4P78363 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC2.25□□□□□ -2.05
ABCA4P78363 HSP90AA5P-201ENST00000438353 2192 ntBASIC2.25□□□□□ -2.05
ABCA4P78363 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC2.25□□□□□ -2.05
ABCA4P78363 MIR124-3-201ENST00000384866 87 ntBASIC2.25□□□□□ -2.05
ABCA4P78363 RPL7P53-201ENST00000421245 739 ntBASIC2.25□□□□□ -2.05
ABCA4P78363 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.25□□□□□ -2.05
ABCA4P78363 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC2.25□□□□□ -2.05
ABCA4P78363 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.25□□□□□ -2.05
ABCA4P78363 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC2.25□□□□□ -2.05
ABCA4P78363 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC2.25□□□□□ -2.05
ABCA4P78363 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC2.25□□□□□ -2.05
ABCA4P78363 RNU6-1231P-201ENST00000517185 103 ntBASIC2.25□□□□□ -2.05
ABCA4P78363 SMARCE1P4-201ENST00000523647 241 ntBASIC2.25□□□□□ -2.05
ABCA4P78363 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC2.25□□□□□ -2.05
ABCA4P78363 AC016727.1-205ENST00000605437 569 ntBASIC2.25□□□□□ -2.05
ABCA4P78363 C2orf27A-204ENST00000623058 969 ntBASIC2.25□□□□□ -2.05
ABCA4P78363 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC2.25□□□□□ -2.05
ABCA4P78363 MFF-206ENST00000392059 1710 ntTSL 5 BASIC2.25□□□□□ -2.05
ABCA4P78363 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC2.25□□□□□ -2.05
ABCA4P78363 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
ABCA4P78363 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
ABCA4P78363 KLRF1-201ENST00000279545 1091 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
ABCA4P78363 OR6C74-201ENST00000343870 1105 ntAPPRIS P1 BASIC2.25□□□□□ -2.05
ABCA4P78363 RNU4-7P-201ENST00000364758 141 ntBASIC2.25□□□□□ -2.05
ABCA4P78363 PARD3-204ENST00000374768 799 ntTSL 3 BASIC2.25□□□□□ -2.05
ABCA4P78363 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC2.25□□□□□ -2.05
ABCA4P78363 RPS20P22-201ENST00000473700 357 ntBASIC2.25□□□□□ -2.05
ABCA4P78363 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC2.25□□□□□ -2.05
ABCA4P78363 RNA5SP458-201ENST00000516188 119 ntBASIC2.25□□□□□ -2.05
ABCA4P78363 AC011124.1-204ENST00000522265 562 ntTSL 4 BASIC2.25□□□□□ -2.05
ABCA4P78363 AL391156.1-201ENST00000554965 554 ntBASIC2.25□□□□□ -2.05
ABCA4P78363 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC2.25□□□□□ -2.05
ABCA4P78363 MIR4512-201ENST00000583257 77 ntBASIC2.25□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 114.5 ms