Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC2.46□□□□□ -2.02
UBA52P62987 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.46□□□□□ -2.02
UBA52P62987 AC108734.1-201ENST00000439549 399 ntBASIC2.46□□□□□ -2.02
UBA52P62987 AC000041.1-201ENST00000439655 175 ntBASIC2.46□□□□□ -2.02
UBA52P62987 SSXP4-201ENST00000451349 245 ntBASIC2.46□□□□□ -2.02
UBA52P62987 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC2.46□□□□□ -2.02
UBA52P62987 RPL21P39-201ENST00000463605 483 ntBASIC2.46□□□□□ -2.02
UBA52P62987 AC011979.1-201ENST00000472300 483 ntBASIC2.46□□□□□ -2.02
UBA52P62987 RPL21P93-201ENST00000480465 489 ntBASIC2.46□□□□□ -2.02
UBA52P62987 AC233702.1-201ENST00000482905 502 ntBASIC2.46□□□□□ -2.02
UBA52P62987 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC2.46□□□□□ -2.02
UBA52P62987 AC093591.1-201ENST00000491435 481 ntBASIC2.46□□□□□ -2.02
UBA52P62987 RPL21P16-201ENST00000495531 483 ntBASIC2.46□□□□□ -2.02
UBA52P62987 THAP6-212ENST00000508105 1103 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
UBA52P62987 TBCAP3-201ENST00000512475 312 ntBASIC2.46□□□□□ -2.02
UBA52P62987 AC103783.1-201ENST00000520506 373 ntBASIC2.46□□□□□ -2.02
UBA52P62987 AL355432.1-201ENST00000522960 564 ntTSL 3 BASIC2.46□□□□□ -2.02
UBA52P62987 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC2.46□□□□□ -2.02
UBA52P62987 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC2.46□□□□□ -2.02
UBA52P62987 MIR3162-201ENST00000581818 82 ntBASIC2.46□□□□□ -2.02
UBA52P62987 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
UBA52P62987 ELOCP29-201ENST00000588193 334 ntBASIC2.46□□□□□ -2.02
UBA52P62987 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC2.46□□□□□ -2.02
UBA52P62987 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC2.46□□□□□ -2.02
UBA52P62987 AL356575.1-201ENST00000603008 283 ntBASIC2.46□□□□□ -2.02
UBA52P62987 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
UBA52P62987 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC2.46□□□□□ -2.02
UBA52P62987 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.46□□□□□ -2.02
UBA52P62987 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.45□□□□□ -2.02
UBA52P62987 TAS2R10-201ENST00000240619 1042 ntAPPRIS P1 BASIC2.45□□□□□ -2.02
UBA52P62987 MIR181A2-201ENST00000384863 110 ntBASIC2.45□□□□□ -2.02
UBA52P62987 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.45□□□□□ -2.02
UBA52P62987 SNORD67-201ENST00000390833 111 ntBASIC2.45□□□□□ -2.02
UBA52P62987 CCNB2P1-201ENST00000399411 1150 ntBASIC2.45□□□□□ -2.02
UBA52P62987 RN7SKP284-201ENST00000411002 343 ntBASIC2.45□□□□□ -2.02
UBA52P62987 AC092638.1-201ENST00000411966 1275 ntBASIC2.45□□□□□ -2.02
UBA52P62987 AC093084.1-201ENST00000424233 687 ntBASIC2.45□□□□□ -2.02
UBA52P62987 AL445528.1-201ENST00000426330 420 ntBASIC2.45□□□□□ -2.02
UBA52P62987 RPL23AP4-201ENST00000427757 463 ntBASIC2.45□□□□□ -2.02
UBA52P62987 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC2.45□□□□□ -2.02
UBA52P62987 AL139132.1-201ENST00000431587 344 ntBASIC2.45□□□□□ -2.02
UBA52P62987 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC2.45□□□□□ -2.02
UBA52P62987 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC2.45□□□□□ -2.02
UBA52P62987 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC2.45□□□□□ -2.02
UBA52P62987 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC2.45□□□□□ -2.02
UBA52P62987 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC2.45□□□□□ -2.02
UBA52P62987 HNRNPDLP3-201ENST00000456745 380 ntBASIC2.45□□□□□ -2.02
UBA52P62987 RPL21P104-201ENST00000464143 478 ntBASIC2.45□□□□□ -2.02
UBA52P62987 RPL31P50-201ENST00000471002 296 ntBASIC2.45□□□□□ -2.02
UBA52P62987 RPS29P26-201ENST00000477483 171 ntBASIC2.45□□□□□ -2.02
UBA52P62987 RAD51AP1P1-201ENST00000484195 1001 ntBASIC2.45□□□□□ -2.02
UBA52P62987 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC2.45□□□□□ -2.02
UBA52P62987 AC026412.2-201ENST00000512270 1075 ntBASIC2.45□□□□□ -2.02
UBA52P62987 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC2.45□□□□□ -2.02
UBA52P62987 SNORA9.3-201ENST00000516383 129 ntBASIC2.45□□□□□ -2.02
UBA52P62987 RNA5SP367-201ENST00000516557 118 ntBASIC2.45□□□□□ -2.02
UBA52P62987 SNORA31.15-201ENST00000516771 132 ntBASIC2.45□□□□□ -2.02
UBA52P62987 IGLVIV-66-1-201ENST00000521832 460 ntBASIC2.45□□□□□ -2.02
UBA52P62987 AC004696.1-201ENST00000614345 607 ntBASIC2.45□□□□□ -2.02
UBA52P62987 AC121761.2-201ENST00000617300 689 ntBASIC2.45□□□□□ -2.02
UBA52P62987 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
UBA52P62987 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
UBA52P62987 CCNE2-202ENST00000396133 1361 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
UBA52P62987 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
UBA52P62987 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
UBA52P62987 CPD-202ENST00000543464 4007 ntTSL 2 BASIC2.44□□□□□ -2.02
UBA52P62987 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
UBA52P62987 SNORA25.6-201ENST00000364121 118 ntBASIC2.44□□□□□ -2.02
UBA52P62987 CFHR2-201ENST00000367415 1059 ntAPPRIS P2 TSL 1 (best) BASIC2.44□□□□□ -2.02
UBA52P62987 MIR607-201ENST00000385241 96 ntBASIC2.44□□□□□ -2.02
UBA52P62987 RNU1-101P-201ENST00000391171 127 ntBASIC2.44□□□□□ -2.02
UBA52P62987 BTBD10P2-201ENST00000404779 676 ntBASIC2.44□□□□□ -2.02
UBA52P62987 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC2.44□□□□□ -2.02
UBA52P62987 LINC00412-201ENST00000444744 420 ntTSL 2 BASIC2.44□□□□□ -2.02
UBA52P62987 ST13P20-201ENST00000447996 1065 ntBASIC2.44□□□□□ -2.02
UBA52P62987 MRPL35P4-201ENST00000453682 566 ntBASIC2.44□□□□□ -2.02
UBA52P62987 CFHR2-203ENST00000476712 1020 ntAPPRIS ALT2 TSL 3 BASIC2.44□□□□□ -2.02
UBA52P62987 AC083906.5-201ENST00000503722 328 ntBASIC2.44□□□□□ -2.02
UBA52P62987 KLHL2P1-201ENST00000508691 521 ntBASIC2.44□□□□□ -2.02
UBA52P62987 IGHVII-62-1-201ENST00000519283 235 ntBASIC2.44□□□□□ -2.02
UBA52P62987 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC2.44□□□□□ -2.02
UBA52P62987 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC2.44□□□□□ -2.02
UBA52P62987 MIR3690-201ENST00000580266 75 ntBASIC2.44□□□□□ -2.02
UBA52P62987 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC2.44□□□□□ -2.02
UBA52P62987 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC2.44□□□□□ -2.02
UBA52P62987 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC2.44□□□□□ -2.02
UBA52P62987 AL390838.2-201ENST00000602394 274 ntBASIC2.44□□□□□ -2.02
UBA52P62987 AL109653.1-201ENST00000603091 248 ntBASIC2.44□□□□□ -2.02
UBA52P62987 AC107294.1-201ENST00000609524 467 ntBASIC2.44□□□□□ -2.02
UBA52P62987 AC090115.4-201ENST00000609970 188 ntBASIC2.44□□□□□ -2.02
UBA52P62987 AL359535.1-201ENST00000612100 1087 ntBASIC2.44□□□□□ -2.02
UBA52P62987 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
UBA52P62987 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
UBA52P62987 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
UBA52P62987 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC2.44□□□□□ -2.02
UBA52P62987 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.44□□□□□ -2.02
UBA52P62987 ZNF90P1-201ENST00000480493 1951 ntBASIC2.43□□□□□ -2.02
UBA52P62987 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
UBA52P62987 RNU1-35P-201ENST00000362782 153 ntBASIC2.43□□□□□ -2.02
UBA52P62987 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC2.43□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 98.5 ms