Protein–RNA interactions for Protein: P62684

HERVK_113, Endogenous retrovirus group K member 113 Gag polyprotein, humanhuman

Predictions only

Length 666 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERVK_113P62684 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC5.2□□□□□ -1.58
HERVK_113P62684 AC063943.3-201ENST00000615562 356 ntBASIC5.2□□□□□ -1.58
HERVK_113P62684 AC006338.1-201ENST00000618453 749 ntBASIC5.2□□□□□ -1.58
HERVK_113P62684 AP001005.3-201ENST00000622049 129 ntBASIC5.2□□□□□ -1.58
HERVK_113P62684 AC006065.6-201ENST00000625201 545 ntBASIC5.2□□□□□ -1.58
HERVK_113P62684 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
HERVK_113P62684 AL359922.3-201ENST00000624779 1670 ntBASIC5.2□□□□□ -1.58
HERVK_113P62684 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
HERVK_113P62684 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC5.2□□□□□ -1.58
HERVK_113P62684 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC5.2□□□□□ -1.58
HERVK_113P62684 AC104118.1-201ENST00000607625 1589 ntBASIC5.2□□□□□ -1.58
HERVK_113P62684 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
HERVK_113P62684 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC5.2□□□□□ -1.58
HERVK_113P62684 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
HERVK_113P62684 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC5.2□□□□□ -1.58
HERVK_113P62684 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
HERVK_113P62684 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC5.19□□□□□ -1.58
HERVK_113P62684 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
HERVK_113P62684 EIF2AP4-201ENST00000424793 1781 ntBASIC5.19□□□□□ -1.58
HERVK_113P62684 CPHL1P-201ENST00000461341 3407 ntBASIC5.19□□□□□ -1.58
HERVK_113P62684 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
HERVK_113P62684 AC010300.1-201ENST00000600671 5134 ntBASIC5.19□□□□□ -1.58
HERVK_113P62684 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
HERVK_113P62684 AC092079.1-201ENST00000558620 1985 ntBASIC5.19□□□□□ -1.58
HERVK_113P62684 AC008033.1-201ENST00000216407 1162 ntBASIC5.19□□□□□ -1.58
HERVK_113P62684 RNU1-132P-201ENST00000364300 164 ntBASIC5.19□□□□□ -1.58
HERVK_113P62684 RNU1-13P-201ENST00000384499 162 ntBASIC5.19□□□□□ -1.58
HERVK_113P62684 RNU6-114P-201ENST00000384704 105 ntBASIC5.19□□□□□ -1.58
HERVK_113P62684 MTCO3P40-201ENST00000392516 676 ntBASIC5.19□□□□□ -1.58
HERVK_113P62684 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC5.19□□□□□ -1.58
HERVK_113P62684 SNRPFP1-201ENST00000414761 252 ntBASIC5.19□□□□□ -1.58
HERVK_113P62684 MTCYBP24-201ENST00000420387 1106 ntBASIC5.19□□□□□ -1.58
HERVK_113P62684 TRAPPC2P5-201ENST00000426293 308 ntBASIC5.19□□□□□ -1.58
HERVK_113P62684 BX890604.2-201ENST00000427883 474 ntBASIC5.19□□□□□ -1.58
HERVK_113P62684 ELOCP14-201ENST00000428070 331 ntBASIC5.19□□□□□ -1.58
HERVK_113P62684 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC5.19□□□□□ -1.58
HERVK_113P62684 RPL22P17-201ENST00000438729 315 ntBASIC5.19□□□□□ -1.58
HERVK_113P62684 ELOCP7-201ENST00000439968 331 ntBASIC5.19□□□□□ -1.58
HERVK_113P62684 PGBD4P3-201ENST00000440731 581 ntBASIC5.19□□□□□ -1.58
HERVK_113P62684 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC5.19□□□□□ -1.58
HERVK_113P62684 MTCO3P20-201ENST00000454926 688 ntBASIC5.19□□□□□ -1.58
HERVK_113P62684 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC5.19□□□□□ -1.58
HERVK_113P62684 AC112204.1-201ENST00000502591 103 ntBASIC5.19□□□□□ -1.58
HERVK_113P62684 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC5.19□□□□□ -1.58
HERVK_113P62684 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC5.19□□□□□ -1.58
HERVK_113P62684 AC098799.2-201ENST00000509466 868 ntBASIC5.19□□□□□ -1.58
HERVK_113P62684 PARP4P3-201ENST00000510265 317 ntBASIC5.19□□□□□ -1.58
HERVK_113P62684 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC5.19□□□□□ -1.58
HERVK_113P62684 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC5.19□□□□□ -1.58
HERVK_113P62684 TRAV8-5-201ENST00000537369 341 ntBASIC5.19□□□□□ -1.58
HERVK_113P62684 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC5.19□□□□□ -1.58
HERVK_113P62684 AC008127.2-201ENST00000549925 1075 ntBASIC5.19□□□□□ -1.58
HERVK_113P62684 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC5.19□□□□□ -1.58
HERVK_113P62684 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC5.19□□□□□ -1.58
HERVK_113P62684 TPMTP1-201ENST00000592307 737 ntBASIC5.19□□□□□ -1.58
HERVK_113P62684 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC5.19□□□□□ -1.58
HERVK_113P62684 BNIP3P33-201ENST00000598912 569 ntBASIC5.19□□□□□ -1.58
HERVK_113P62684 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC5.19□□□□□ -1.58
HERVK_113P62684 AC104458.1-201ENST00000608243 463 ntBASIC5.19□□□□□ -1.58
HERVK_113P62684 AC009237.17-201ENST00000618111 748 ntBASIC5.19□□□□□ -1.58
HERVK_113P62684 AC136475.10-201ENST00000620253 385 ntBASIC5.19□□□□□ -1.58
HERVK_113P62684 MIR492-201ENST00000638676 116 ntBASIC5.19□□□□□ -1.58
HERVK_113P62684 AC022893.2-201ENST00000564832 3296 ntBASIC5.19□□□□□ -1.58
HERVK_113P62684 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
HERVK_113P62684 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC5.19□□□□□ -1.58
HERVK_113P62684 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC5.19□□□□□ -1.58
HERVK_113P62684 MFSD8-242ENST00000641690 4199 ntBASIC5.19□□□□□ -1.58
HERVK_113P62684 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
HERVK_113P62684 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC5.19□□□□□ -1.58
HERVK_113P62684 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
HERVK_113P62684 AC107081.3-201ENST00000612715 2034 ntBASIC5.18□□□□□ -1.58
HERVK_113P62684 AC107068.1-201ENST00000563286 4218 ntBASIC5.18□□□□□ -1.58
HERVK_113P62684 ARHGAP42P3-201ENST00000443989 2508 ntBASIC5.18□□□□□ -1.58
HERVK_113P62684 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
HERVK_113P62684 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC5.18□□□□□ -1.58
HERVK_113P62684 RNU1-94P-201ENST00000362627 173 ntBASIC5.18□□□□□ -1.58
HERVK_113P62684 RNU6-921P-201ENST00000384361 107 ntBASIC5.18□□□□□ -1.58
HERVK_113P62684 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
HERVK_113P62684 HSPD1P16-201ENST00000402302 394 ntBASIC5.18□□□□□ -1.58
HERVK_113P62684 AL022722.2-201ENST00000402519 180 ntBASIC5.18□□□□□ -1.58
HERVK_113P62684 MIR1305-201ENST00000408300 86 ntBASIC5.18□□□□□ -1.58
HERVK_113P62684 Y_RNA.608-201ENST00000410647 95 ntBASIC5.18□□□□□ -1.58
HERVK_113P62684 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC5.18□□□□□ -1.58
HERVK_113P62684 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
HERVK_113P62684 SPA17P1-201ENST00000416656 452 ntBASIC5.18□□□□□ -1.58
HERVK_113P62684 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC5.18□□□□□ -1.58
HERVK_113P62684 AC069157.1-201ENST00000421749 137 ntBASIC5.18□□□□□ -1.58
HERVK_113P62684 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC5.18□□□□□ -1.58
HERVK_113P62684 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC5.18□□□□□ -1.58
HERVK_113P62684 SNRPEP8-201ENST00000442866 260 ntBASIC5.18□□□□□ -1.58
HERVK_113P62684 MTND6P13-201ENST00000443510 523 ntBASIC5.18□□□□□ -1.58
HERVK_113P62684 AC112653.1-201ENST00000443851 386 ntBASIC5.18□□□□□ -1.58
HERVK_113P62684 EEF1A1P1-201ENST00000447052 739 ntBASIC5.18□□□□□ -1.58
HERVK_113P62684 AL359073.1-201ENST00000448036 403 ntBASIC5.18□□□□□ -1.58
HERVK_113P62684 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC5.18□□□□□ -1.58
HERVK_113P62684 AC006511.1-201ENST00000470614 315 ntBASIC5.18□□□□□ -1.58
HERVK_113P62684 AC012170.1-201ENST00000495139 359 ntBASIC5.18□□□□□ -1.58
HERVK_113P62684 AC022447.3-201ENST00000506865 495 ntBASIC5.18□□□□□ -1.58
HERVK_113P62684 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC5.18□□□□□ -1.58
HERVK_113P62684 AC034159.1-201ENST00000513885 583 ntBASIC5.18□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 83.3 ms