Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 NDUFB9P3-201ENST00000521269 501 ntBASIC3.1□□□□□ -1.91
CLDN6P56747 AP004371.1-201ENST00000525240 214 ntBASIC3.1□□□□□ -1.91
CLDN6P56747 RGS4-207ENST00000527809 817 ntTSL 4 BASIC3.1□□□□□ -1.91
CLDN6P56747 HIGD1AP10-201ENST00000527837 282 ntBASIC3.1□□□□□ -1.91
CLDN6P56747 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC3.1□□□□□ -1.91
CLDN6P56747 AC107954.1-201ENST00000565906 727 ntBASIC3.1□□□□□ -1.91
CLDN6P56747 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC3.1□□□□□ -1.91
CLDN6P56747 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.1□□□□□ -1.91
CLDN6P56747 AC093732.2-201ENST00000607950 274 ntBASIC3.1□□□□□ -1.91
CLDN6P56747 XIST_intron.1-201ENST00000619444 68 ntBASIC3.1□□□□□ -1.91
CLDN6P56747 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC3.1□□□□□ -1.91
CLDN6P56747 AL356490.1-201ENST00000623079 479 ntBASIC3.1□□□□□ -1.91
CLDN6P56747 AC110801.1-201ENST00000623590 212 ntBASIC3.1□□□□□ -1.91
CLDN6P56747 AC092184.1-201ENST00000625042 715 ntBASIC3.1□□□□□ -1.91
CLDN6P56747 AL356118.1-201ENST00000635272 1078 ntBASIC3.1□□□□□ -1.91
CLDN6P56747 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
CLDN6P56747 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.1□□□□□ -1.91
CLDN6P56747 AC098798.1-201ENST00000503998 1447 ntTSL 5 BASIC3.1□□□□□ -1.91
CLDN6P56747 AL359893.1-201ENST00000447628 1580 ntBASIC3.09□□□□□ -1.91
CLDN6P56747 AC007256.1-201ENST00000392253 2765 ntBASIC3.09□□□□□ -1.91
CLDN6P56747 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
CLDN6P56747 GSTA1-201ENST00000334575 1019 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
CLDN6P56747 RNA5SP27-201ENST00000363839 119 ntBASIC3.09□□□□□ -1.91
CLDN6P56747 RNU6-374P-201ENST00000364146 108 ntBASIC3.09□□□□□ -1.91
CLDN6P56747 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
CLDN6P56747 NRG4-201ENST00000394907 1159 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
CLDN6P56747 AL121972.1-201ENST00000402023 252 ntBASIC3.09□□□□□ -1.91
CLDN6P56747 RNA5SP80-201ENST00000410475 111 ntBASIC3.09□□□□□ -1.91
CLDN6P56747 AL731575.1-201ENST00000413564 418 ntTSL 2 BASIC3.09□□□□□ -1.91
CLDN6P56747 DPYD-AS2-201ENST00000422259 788 ntTSL 3 BASIC3.09□□□□□ -1.91
CLDN6P56747 RPL21P66-201ENST00000426566 466 ntBASIC3.09□□□□□ -1.91
CLDN6P56747 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC3.09□□□□□ -1.91
CLDN6P56747 AC011242.1-201ENST00000433596 1158 ntBASIC3.09□□□□□ -1.91
CLDN6P56747 PTP4A1P3-201ENST00000433661 420 ntBASIC3.09□□□□□ -1.91
CLDN6P56747 HSD52-202ENST00000436225 772 ntTSL 3 BASIC3.09□□□□□ -1.91
CLDN6P56747 ATP5C1P1-201ENST00000441945 895 ntBASIC3.09□□□□□ -1.91
CLDN6P56747 RPS26P56-201ENST00000444468 240 ntBASIC3.09□□□□□ -1.91
CLDN6P56747 RPL7P59-201ENST00000447700 943 ntBASIC3.09□□□□□ -1.91
CLDN6P56747 TEX41-209ENST00000451478 452 ntTSL 2 BASIC3.09□□□□□ -1.91
CLDN6P56747 AC006539.3-201ENST00000454258 129 ntBASIC3.09□□□□□ -1.91
CLDN6P56747 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC3.09□□□□□ -1.91
CLDN6P56747 RPS29P26-201ENST00000477483 171 ntBASIC3.09□□□□□ -1.91
CLDN6P56747 AC004924.1-201ENST00000480160 781 ntBASIC3.09□□□□□ -1.91
CLDN6P56747 THAP6-203ENST00000502620 582 ntTSL 3 BASIC3.09□□□□□ -1.91
CLDN6P56747 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC3.09□□□□□ -1.91
CLDN6P56747 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC3.09□□□□□ -1.91
CLDN6P56747 AC024132.3-201ENST00000513616 649 ntTSL 5 BASIC3.09□□□□□ -1.91
CLDN6P56747 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC3.09□□□□□ -1.91
CLDN6P56747 AP002404.1-201ENST00000532005 451 ntBASIC3.09□□□□□ -1.91
CLDN6P56747 LRRC37A5P-202ENST00000536054 1095 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
CLDN6P56747 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC3.09□□□□□ -1.91
CLDN6P56747 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC3.09□□□□□ -1.91
CLDN6P56747 AC023908.1-201ENST00000559899 567 ntTSL 4 BASIC3.09□□□□□ -1.91
CLDN6P56747 AC015917.1-201ENST00000579654 510 ntBASIC3.09□□□□□ -1.91
CLDN6P56747 MIR2682-201ENST00000580305 110 ntBASIC3.09□□□□□ -1.91
CLDN6P56747 PRELID3BP8-201ENST00000604148 295 ntBASIC3.09□□□□□ -1.91
CLDN6P56747 AC006023.2-201ENST00000609916 167 ntBASIC3.09□□□□□ -1.91
CLDN6P56747 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC3.09□□□□□ -1.91
CLDN6P56747 MIR7153-201ENST00000637758 57 ntBASIC3.09□□□□□ -1.91
CLDN6P56747 MFSD8-233ENST00000641482 4860 ntBASIC3.09□□□□□ -1.91
CLDN6P56747 ZNF33BP1-201ENST00000452497 1834 ntBASIC3.09□□□□□ -1.92
CLDN6P56747 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.92
CLDN6P56747 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC3.09□□□□□ -1.92
CLDN6P56747 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.09□□□□□ -1.92
CLDN6P56747 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC3.09□□□□□ -1.92
CLDN6P56747 AP001350.1-201ENST00000601906 1524 ntBASIC3.09□□□□□ -1.92
CLDN6P56747 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC3.08□□□□□ -1.92
CLDN6P56747 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.08□□□□□ -1.92
CLDN6P56747 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
CLDN6P56747 AC058791.1-201ENST00000608412 3198 ntBASIC3.08□□□□□ -1.92
CLDN6P56747 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
CLDN6P56747 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
CLDN6P56747 SNORA54-201ENST00000384281 123 ntBASIC3.08□□□□□ -1.92
CLDN6P56747 RNU6-1005P-201ENST00000384519 107 ntBASIC3.08□□□□□ -1.92
CLDN6P56747 RN7SKP284-201ENST00000411002 343 ntBASIC3.08□□□□□ -1.92
CLDN6P56747 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC3.08□□□□□ -1.92
CLDN6P56747 AC023128.1-201ENST00000432431 799 ntTSL 3 BASIC3.08□□□□□ -1.92
CLDN6P56747 NEK4P1-201ENST00000433383 879 ntBASIC3.08□□□□□ -1.92
CLDN6P56747 FABP5P3-201ENST00000437960 408 ntBASIC3.08□□□□□ -1.92
CLDN6P56747 AC000041.1-201ENST00000439655 175 ntBASIC3.08□□□□□ -1.92
CLDN6P56747 TXNP1-201ENST00000441872 371 ntBASIC3.08□□□□□ -1.92
CLDN6P56747 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC3.08□□□□□ -1.92
CLDN6P56747 ANKRD30BP3-201ENST00000444850 1070 ntBASIC3.08□□□□□ -1.92
CLDN6P56747 MTND1P33-201ENST00000446251 917 ntBASIC3.08□□□□□ -1.92
CLDN6P56747 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
CLDN6P56747 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC3.08□□□□□ -1.92
CLDN6P56747 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC3.08□□□□□ -1.92
CLDN6P56747 RPL21P104-201ENST00000464143 478 ntBASIC3.08□□□□□ -1.92
CLDN6P56747 RPS4XP22-201ENST00000480755 780 ntBASIC3.08□□□□□ -1.92
CLDN6P56747 RNF138P1-201ENST00000502765 546 ntBASIC3.08□□□□□ -1.92
CLDN6P56747 AC096576.3-201ENST00000505528 721 ntTSL 5 BASIC3.08□□□□□ -1.92
CLDN6P56747 AC104108.1-201ENST00000509930 412 ntBASIC3.08□□□□□ -1.92
CLDN6P56747 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC3.08□□□□□ -1.92
CLDN6P56747 RNA5SP356-201ENST00000515972 94 ntBASIC3.08□□□□□ -1.92
CLDN6P56747 IGKV2D-36-201ENST00000518643 226 ntBASIC3.08□□□□□ -1.92
CLDN6P56747 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC3.08□□□□□ -1.92
CLDN6P56747 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
CLDN6P56747 AL161804.1-201ENST00000555600 708 ntTSL 3 BASIC3.08□□□□□ -1.92
CLDN6P56747 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC3.08□□□□□ -1.92
CLDN6P56747 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.08□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 144.5 ms