Protein–RNA interactions for Protein: P56589

PEX3, Peroxisomal biogenesis factor 3, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX3P56589 SNORD46.1-201ENST00000364139 104 ntBASIC3.66□□□□□ -1.82
PEX3P56589 RNA5SP44-201ENST00000410446 133 ntBASIC3.66□□□□□ -1.82
PEX3P56589 RNU6-272P-201ENST00000411028 104 ntBASIC3.66□□□□□ -1.82
PEX3P56589 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC3.66□□□□□ -1.82
PEX3P56589 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC3.66□□□□□ -1.82
PEX3P56589 MTCYBP32-201ENST00000427945 1084 ntBASIC3.66□□□□□ -1.82
PEX3P56589 ARF4P2-201ENST00000430209 526 ntBASIC3.66□□□□□ -1.82
PEX3P56589 AP000477.1-202ENST00000434859 847 ntTSL 3 BASIC3.66□□□□□ -1.82
PEX3P56589 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC3.66□□□□□ -1.82
PEX3P56589 AC004865.1-201ENST00000442276 1003 ntBASIC3.66□□□□□ -1.82
PEX3P56589 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC3.66□□□□□ -1.82
PEX3P56589 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
PEX3P56589 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC3.66□□□□□ -1.82
PEX3P56589 RPS15AP1-201ENST00000457423 391 ntBASIC3.66□□□□□ -1.82
PEX3P56589 RPL23AP62-201ENST00000463396 453 ntBASIC3.66□□□□□ -1.82
PEX3P56589 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC3.66□□□□□ -1.82
PEX3P56589 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC3.66□□□□□ -1.82
PEX3P56589 AC090071.1-201ENST00000507713 644 ntBASIC3.66□□□□□ -1.82
PEX3P56589 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC3.66□□□□□ -1.82
PEX3P56589 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC3.66□□□□□ -1.82
PEX3P56589 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC3.66□□□□□ -1.82
PEX3P56589 LINC02274-201ENST00000555539 1174 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
PEX3P56589 AC074050.1-201ENST00000563247 211 ntBASIC3.66□□□□□ -1.82
PEX3P56589 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC3.66□□□□□ -1.82
PEX3P56589 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC3.66□□□□□ -1.82
PEX3P56589 AL035411.2-201ENST00000604022 421 ntBASIC3.66□□□□□ -1.82
PEX3P56589 AL583856.2-201ENST00000606298 543 ntBASIC3.66□□□□□ -1.82
PEX3P56589 AC106052.1-201ENST00000608029 497 ntBASIC3.66□□□□□ -1.82
PEX3P56589 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC3.66□□□□□ -1.82
PEX3P56589 AC009237.15-201ENST00000610252 501 ntBASIC3.66□□□□□ -1.82
PEX3P56589 RMST_8.1-201ENST00000610287 165 ntBASIC3.66□□□□□ -1.82
PEX3P56589 AL592148.2-201ENST00000612210 372 ntBASIC3.66□□□□□ -1.82
PEX3P56589 RNVU1-4-201ENST00000612985 164 ntBASIC3.66□□□□□ -1.82
PEX3P56589 AC010975.3-201ENST00000618727 978 ntBASIC3.66□□□□□ -1.82
PEX3P56589 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC3.66□□□□□ -1.82
PEX3P56589 AC109454.4-201ENST00000623411 649 ntBASIC3.66□□□□□ -1.82
PEX3P56589 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC3.66□□□□□ -1.82
PEX3P56589 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.66□□□□□ -1.82
PEX3P56589 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.66□□□□□ -1.82
PEX3P56589 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC3.66□□□□□ -1.82
PEX3P56589 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.66□□□□□ -1.82
PEX3P56589 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC3.66□□□□□ -1.82
PEX3P56589 PWAR6-201ENST00000552334 4618 ntBASIC3.66□□□□□ -1.82
PEX3P56589 AL139811.1-201ENST00000424779 2299 ntBASIC3.65□□□□□ -1.82
PEX3P56589 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC3.65□□□□□ -1.82
PEX3P56589 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
PEX3P56589 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.65□□□□□ -1.82
PEX3P56589 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.65□□□□□ -1.82
PEX3P56589 XPOTP1-201ENST00000443317 2398 ntBASIC3.65□□□□□ -1.83
PEX3P56589 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
PEX3P56589 ZNF29P-201ENST00000225587 168 ntBASIC3.65□□□□□ -1.83
PEX3P56589 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
PEX3P56589 RNU1-70P-201ENST00000362618 164 ntBASIC3.65□□□□□ -1.83
PEX3P56589 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
PEX3P56589 Y_RNA.472-201ENST00000384322 102 ntBASIC3.65□□□□□ -1.83
PEX3P56589 MIR217-201ENST00000384817 110 ntBASIC3.65□□□□□ -1.83
PEX3P56589 MIR184-201ENST00000384962 84 ntBASIC3.65□□□□□ -1.83
PEX3P56589 AC063979.1-201ENST00000415539 377 ntBASIC3.65□□□□□ -1.83
PEX3P56589 AL158156.1-201ENST00000422509 473 ntBASIC3.65□□□□□ -1.83
PEX3P56589 AC005326.1-201ENST00000429197 123 ntBASIC3.65□□□□□ -1.83
PEX3P56589 YWHAZP8-201ENST00000436935 731 ntBASIC3.65□□□□□ -1.83
PEX3P56589 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC3.65□□□□□ -1.83
PEX3P56589 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.65□□□□□ -1.83
PEX3P56589 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC3.65□□□□□ -1.83
PEX3P56589 DUXAP8-207ENST00000456786 622 ntBASIC3.65□□□□□ -1.83
PEX3P56589 RN7SL601P-201ENST00000471221 293 ntBASIC3.65□□□□□ -1.83
PEX3P56589 AC134050.1-201ENST00000495088 933 ntBASIC3.65□□□□□ -1.83
PEX3P56589 AL358832.1-201ENST00000497800 389 ntBASIC3.65□□□□□ -1.83
PEX3P56589 MTATP6P22-201ENST00000507369 598 ntBASIC3.65□□□□□ -1.83
PEX3P56589 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC3.65□□□□□ -1.83
PEX3P56589 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC3.65□□□□□ -1.83
PEX3P56589 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC3.65□□□□□ -1.83
PEX3P56589 RGS4-207ENST00000527809 817 ntTSL 4 BASIC3.65□□□□□ -1.83
PEX3P56589 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC3.65□□□□□ -1.83
PEX3P56589 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC3.65□□□□□ -1.83
PEX3P56589 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.65□□□□□ -1.83
PEX3P56589 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC3.65□□□□□ -1.83
PEX3P56589 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC3.65□□□□□ -1.83
PEX3P56589 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC3.65□□□□□ -1.83
PEX3P56589 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC3.65□□□□□ -1.83
PEX3P56589 AC017100.2-201ENST00000584628 355 ntBASIC3.65□□□□□ -1.83
PEX3P56589 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC3.65□□□□□ -1.83
PEX3P56589 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.65□□□□□ -1.83
PEX3P56589 AL159169.3-201ENST00000608871 561 ntBASIC3.65□□□□□ -1.83
PEX3P56589 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.65□□□□□ -1.83
PEX3P56589 AL157392.4-201ENST00000609756 345 ntBASIC3.65□□□□□ -1.83
PEX3P56589 DUXAP10-204ENST00000612052 616 ntBASIC3.65□□□□□ -1.83
PEX3P56589 AL592295.2-201ENST00000612578 206 ntBASIC3.65□□□□□ -1.83
PEX3P56589 AC105227.2-201ENST00000615075 605 ntBASIC3.65□□□□□ -1.83
PEX3P56589 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC3.65□□□□□ -1.83
PEX3P56589 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.65□□□□□ -1.83
PEX3P56589 AL078595.3-201ENST00000623815 1166 ntBASIC3.65□□□□□ -1.83
PEX3P56589 MFSD8-245ENST00000641743 948 ntBASIC3.65□□□□□ -1.83
PEX3P56589 SUCLA2P2-201ENST00000417269 1309 ntBASIC3.65□□□□□ -1.83
PEX3P56589 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC3.65□□□□□ -1.83
PEX3P56589 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC3.64□□□□□ -1.83
PEX3P56589 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
PEX3P56589 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
PEX3P56589 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
PEX3P56589 AC090229.1-201ENST00000590983 1609 ntBASIC3.64□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 112.2 ms