Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 IFNG-201ENST00000229135 1218 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
CDH6P55285 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
CDH6P55285 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
CDH6P55285 U3.19-201ENST00000390893 196 ntBASIC3.31□□□□□ -1.88
CDH6P55285 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC3.31□□□□□ -1.88
CDH6P55285 AL389915.1-201ENST00000422463 466 ntBASIC3.31□□□□□ -1.88
CDH6P55285 AC096632.1-201ENST00000427395 310 ntBASIC3.31□□□□□ -1.88
CDH6P55285 AC114973.1-201ENST00000429057 632 ntBASIC3.31□□□□□ -1.88
CDH6P55285 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC3.31□□□□□ -1.88
CDH6P55285 HMGN2P20-201ENST00000437531 273 ntBASIC3.31□□□□□ -1.88
CDH6P55285 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
CDH6P55285 AL034418.1-201ENST00000448675 860 ntBASIC3.31□□□□□ -1.88
CDH6P55285 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
CDH6P55285 PRSS3P4-201ENST00000453323 162 ntBASIC3.31□□□□□ -1.88
CDH6P55285 HMGN3P1-201ENST00000453847 193 ntBASIC3.31□□□□□ -1.88
CDH6P55285 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC3.31□□□□□ -1.88
CDH6P55285 RN7SL601P-201ENST00000471221 293 ntBASIC3.31□□□□□ -1.88
CDH6P55285 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC3.31□□□□□ -1.88
CDH6P55285 ST13P14-201ENST00000474095 734 ntBASIC3.31□□□□□ -1.88
CDH6P55285 RPL32P34-201ENST00000486380 400 ntBASIC3.31□□□□□ -1.88
CDH6P55285 CD200R1-205ENST00000490004 778 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
CDH6P55285 AP003385.6-201ENST00000531603 374 ntBASIC3.31□□□□□ -1.88
CDH6P55285 AC006518.1-201ENST00000541449 943 ntBASIC3.31□□□□□ -1.88
CDH6P55285 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC3.31□□□□□ -1.88
CDH6P55285 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.31□□□□□ -1.88
CDH6P55285 AC009948.4-201ENST00000604692 675 ntBASIC3.31□□□□□ -1.88
CDH6P55285 AC016542.1-201ENST00000608259 493 ntBASIC3.31□□□□□ -1.88
CDH6P55285 AL590282.1-201ENST00000610379 1136 ntBASIC3.31□□□□□ -1.88
CDH6P55285 STATH-208ENST00000615994 598 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
CDH6P55285 AC006213.5-201ENST00000619673 288 ntBASIC3.31□□□□□ -1.88
CDH6P55285 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC3.31□□□□□ -1.88
CDH6P55285 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC3.31□□□□□ -1.88
CDH6P55285 AC132825.7-201ENST00000638744 335 ntBASIC3.31□□□□□ -1.88
CDH6P55285 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC3.31□□□□□ -1.88
CDH6P55285 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
CDH6P55285 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
CDH6P55285 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
CDH6P55285 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
CDH6P55285 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
CDH6P55285 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC3.3□□□□□ -1.88
CDH6P55285 RNU6-629P-201ENST00000384061 103 ntBASIC3.3□□□□□ -1.88
CDH6P55285 RNA5SP171-201ENST00000391071 115 ntBASIC3.3□□□□□ -1.88
CDH6P55285 AL357075.1-201ENST00000404107 726 ntBASIC3.3□□□□□ -1.88
CDH6P55285 RPL23AP22-201ENST00000437556 453 ntBASIC3.3□□□□□ -1.88
CDH6P55285 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC3.3□□□□□ -1.88
CDH6P55285 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC3.3□□□□□ -1.88
CDH6P55285 RPL7P52-201ENST00000449200 742 ntBASIC3.3□□□□□ -1.88
CDH6P55285 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC3.3□□□□□ -1.88
CDH6P55285 AC091153.1-201ENST00000466297 402 ntBASIC3.3□□□□□ -1.88
CDH6P55285 MTCO3P35-201ENST00000485582 781 ntBASIC3.3□□□□□ -1.88
CDH6P55285 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC3.3□□□□□ -1.88
CDH6P55285 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC3.3□□□□□ -1.88
CDH6P55285 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC3.3□□□□□ -1.88
CDH6P55285 HMGB1P22-201ENST00000505315 124 ntBASIC3.3□□□□□ -1.88
CDH6P55285 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC3.3□□□□□ -1.88
CDH6P55285 OR4A45P-201ENST00000529954 901 ntBASIC3.3□□□□□ -1.88
CDH6P55285 OR8K4P-201ENST00000534608 872 ntBASIC3.3□□□□□ -1.88
CDH6P55285 LYZ-203ENST00000549690 669 ntTSL 2 BASIC3.3□□□□□ -1.88
CDH6P55285 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC3.3□□□□□ -1.88
CDH6P55285 AC005951.1-201ENST00000576706 485 ntBASIC3.3□□□□□ -1.88
CDH6P55285 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC3.3□□□□□ -1.88
CDH6P55285 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC3.3□□□□□ -1.88
CDH6P55285 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC3.3□□□□□ -1.88
CDH6P55285 AF117829.1-206ENST00000621883 3802 ntBASIC3.3□□□□□ -1.88
CDH6P55285 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
CDH6P55285 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
CDH6P55285 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC3.29□□□□□ -1.88
CDH6P55285 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
CDH6P55285 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
CDH6P55285 RNA5SP267-201ENST00000364893 126 ntBASIC3.29□□□□□ -1.88
CDH6P55285 RNU6-441P-201ENST00000384545 106 ntBASIC3.29□□□□□ -1.88
CDH6P55285 AL583834.1-201ENST00000406943 343 ntBASIC3.29□□□□□ -1.88
CDH6P55285 SNORA11-201ENST00000408789 128 ntBASIC3.29□□□□□ -1.88
CDH6P55285 RNA5SP56-201ENST00000410277 118 ntBASIC3.29□□□□□ -1.88
CDH6P55285 RNA5SP293-201ENST00000410527 113 ntBASIC3.29□□□□□ -1.88
CDH6P55285 AC008173.1-201ENST00000418901 264 ntBASIC3.29□□□□□ -1.88
CDH6P55285 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC3.29□□□□□ -1.88
CDH6P55285 AL158156.1-201ENST00000422509 473 ntBASIC3.29□□□□□ -1.88
CDH6P55285 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC3.29□□□□□ -1.88
CDH6P55285 AC005326.1-201ENST00000429197 123 ntBASIC3.29□□□□□ -1.88
CDH6P55285 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC3.29□□□□□ -1.88
CDH6P55285 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC3.29□□□□□ -1.88
CDH6P55285 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC3.29□□□□□ -1.88
CDH6P55285 AL929288.2-201ENST00000446368 407 ntBASIC3.29□□□□□ -1.88
CDH6P55285 ELOCP23-201ENST00000452014 332 ntBASIC3.29□□□□□ -1.88
CDH6P55285 RPS24P6-201ENST00000452670 400 ntBASIC3.29□□□□□ -1.88
CDH6P55285 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC3.29□□□□□ -1.88
CDH6P55285 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC3.29□□□□□ -1.88
CDH6P55285 OR52A4P-202ENST00000481634 799 ntBASIC3.29□□□□□ -1.88
CDH6P55285 IGJP1-201ENST00000522682 475 ntBASIC3.29□□□□□ -1.88
CDH6P55285 PPP1R42-212ENST00000522909 1282 ntAPPRIS ALT2 TSL 5 BASIC3.29□□□□□ -1.88
CDH6P55285 OSBPL9P3-201ENST00000534523 595 ntBASIC3.29□□□□□ -1.88
CDH6P55285 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC3.29□□□□□ -1.88
CDH6P55285 SARNP-203ENST00000552080 726 ntTSL 2 BASIC3.29□□□□□ -1.88
CDH6P55285 AC053481.3-201ENST00000577881 843 ntBASIC3.29□□□□□ -1.88
CDH6P55285 MIR4474-201ENST00000579189 78 ntBASIC3.29□□□□□ -1.88
CDH6P55285 ZNF92P2-201ENST00000600543 1059 ntBASIC3.29□□□□□ -1.88
CDH6P55285 MIR92B-201ENST00000607575 96 ntBASIC3.29□□□□□ -1.88
CDH6P55285 AC245100.7-201ENST00000609678 442 ntBASIC3.29□□□□□ -1.88
CDH6P55285 AC018816.2-201ENST00000621460 353 ntBASIC3.29□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 77 ms