Protein–RNA interactions for Protein: P53667

LIMK1, LIM domain kinase 1, humanhuman

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1P53667 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC3.94□□□□□ -1.78
LIMK1P53667 SUGT1P1-201ENST00000379514 476 ntBASIC3.94□□□□□ -1.78
LIMK1P53667 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC3.94□□□□□ -1.78
LIMK1P53667 RNU6-636P-201ENST00000384598 107 ntBASIC3.94□□□□□ -1.78
LIMK1P53667 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC3.94□□□□□ -1.78
LIMK1P53667 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
LIMK1P53667 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC3.94□□□□□ -1.78
LIMK1P53667 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC3.94□□□□□ -1.78
LIMK1P53667 RPS4XP4-201ENST00000443195 763 ntBASIC3.94□□□□□ -1.78
LIMK1P53667 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC3.94□□□□□ -1.78
LIMK1P53667 TRBV26-201ENST00000456572 344 ntBASIC3.94□□□□□ -1.78
LIMK1P53667 HMGN2P16-201ENST00000456802 261 ntBASIC3.94□□□□□ -1.78
LIMK1P53667 AL049830.2-201ENST00000480072 201 ntBASIC3.94□□□□□ -1.78
LIMK1P53667 OR4G11P-201ENST00000492842 939 ntBASIC3.94□□□□□ -1.78
LIMK1P53667 BNIP3P41-201ENST00000503774 571 ntBASIC3.94□□□□□ -1.78
LIMK1P53667 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC3.94□□□□□ -1.78
LIMK1P53667 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
LIMK1P53667 MTCO2P32-201ENST00000514865 403 ntBASIC3.94□□□□□ -1.78
LIMK1P53667 IGKV2D-36-201ENST00000518643 226 ntBASIC3.94□□□□□ -1.78
LIMK1P53667 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC3.94□□□□□ -1.78
LIMK1P53667 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
LIMK1P53667 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC3.94□□□□□ -1.78
LIMK1P53667 GTF2IP22-201ENST00000554443 182 ntBASIC3.94□□□□□ -1.78
LIMK1P53667 AADACP1-206ENST00000561502 1193 ntBASIC3.94□□□□□ -1.78
LIMK1P53667 AC023813.2-201ENST00000564321 469 ntBASIC3.94□□□□□ -1.78
LIMK1P53667 AC106782.4-201ENST00000568264 210 ntBASIC3.94□□□□□ -1.78
LIMK1P53667 MIR8058-201ENST00000615737 89 ntBASIC3.94□□□□□ -1.78
LIMK1P53667 AC091046.2-201ENST00000620775 665 ntBASIC3.94□□□□□ -1.78
LIMK1P53667 AC103858.2-201ENST00000621471 543 ntBASIC3.94□□□□□ -1.78
LIMK1P53667 MIR3651-201ENST00000630427 90 ntBASIC3.94□□□□□ -1.78
LIMK1P53667 ZNF734P-201ENST00000419494 1534 ntBASIC3.94□□□□□ -1.78
LIMK1P53667 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC3.94□□□□□ -1.78
LIMK1P53667 HSP90AA4P-202ENST00000506915 2228 ntBASIC3.94□□□□□ -1.78
LIMK1P53667 AC107982.1-201ENST00000507171 1300 ntBASIC3.94□□□□□ -1.78
LIMK1P53667 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC3.93□□□□□ -1.78
LIMK1P53667 AL359893.1-201ENST00000447628 1580 ntBASIC3.93□□□□□ -1.78
LIMK1P53667 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC3.93□□□□□ -1.78
LIMK1P53667 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC3.93□□□□□ -1.78
LIMK1P53667 AL672296.1-201ENST00000427780 2158 ntBASIC3.93□□□□□ -1.78
LIMK1P53667 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
LIMK1P53667 AC027287.1-201ENST00000553115 1453 ntBASIC3.93□□□□□ -1.78
LIMK1P53667 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
LIMK1P53667 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC3.93□□□□□ -1.78
LIMK1P53667 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC3.93□□□□□ -1.78
LIMK1P53667 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
LIMK1P53667 RNA5SP322-201ENST00000363617 119 ntBASIC3.93□□□□□ -1.78
LIMK1P53667 AL138878.1-201ENST00000405131 347 ntBASIC3.93□□□□□ -1.78
LIMK1P53667 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
LIMK1P53667 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC3.93□□□□□ -1.78
LIMK1P53667 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC3.93□□□□□ -1.78
LIMK1P53667 AL158156.1-201ENST00000422509 473 ntBASIC3.93□□□□□ -1.78
LIMK1P53667 SDCBPP2-201ENST00000424643 885 ntBASIC3.93□□□□□ -1.78
LIMK1P53667 AL031429.1-201ENST00000426775 749 ntTSL 2 BASIC3.93□□□□□ -1.78
LIMK1P53667 RPL31P54-201ENST00000429803 370 ntBASIC3.93□□□□□ -1.78
LIMK1P53667 AC011742.1-201ENST00000431448 434 ntBASIC3.93□□□□□ -1.78
LIMK1P53667 TBCAP1-201ENST00000436520 327 ntBASIC3.93□□□□□ -1.78
LIMK1P53667 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC3.93□□□□□ -1.78
LIMK1P53667 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC3.93□□□□□ -1.78
LIMK1P53667 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC3.93□□□□□ -1.78
LIMK1P53667 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC3.93□□□□□ -1.78
LIMK1P53667 AL133477.1-201ENST00000457472 514 ntBASIC3.93□□□□□ -1.78
LIMK1P53667 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC3.93□□□□□ -1.78
LIMK1P53667 AC006517.1-201ENST00000480485 328 ntBASIC3.93□□□□□ -1.78
LIMK1P53667 RPS3AP6-201ENST00000484430 795 ntBASIC3.93□□□□□ -1.78
LIMK1P53667 HMGB3P15-201ENST00000507326 574 ntBASIC3.93□□□□□ -1.78
LIMK1P53667 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC3.93□□□□□ -1.78
LIMK1P53667 RN7SKP13-201ENST00000515933 244 ntBASIC3.93□□□□□ -1.78
LIMK1P53667 RNU6-1225P-201ENST00000516336 65 ntBASIC3.93□□□□□ -1.78
LIMK1P53667 RNU1-103P-201ENST00000516502 125 ntBASIC3.93□□□□□ -1.78
LIMK1P53667 RNU6-1261P-201ENST00000517194 104 ntBASIC3.93□□□□□ -1.78
LIMK1P53667 AC025437.3-201ENST00000523178 771 ntTSL 5 BASIC3.93□□□□□ -1.78
LIMK1P53667 AC023442.2-201ENST00000526455 270 ntTSL 3 BASIC3.93□□□□□ -1.78
LIMK1P53667 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC3.93□□□□□ -1.78
LIMK1P53667 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC3.93□□□□□ -1.78
LIMK1P53667 AP003385.6-201ENST00000531603 374 ntBASIC3.93□□□□□ -1.78
LIMK1P53667 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC3.93□□□□□ -1.78
LIMK1P53667 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC3.93□□□□□ -1.78
LIMK1P53667 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC3.93□□□□□ -1.78
LIMK1P53667 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC3.93□□□□□ -1.78
LIMK1P53667 EIF4A2P1-201ENST00000587313 1063 ntBASIC3.93□□□□□ -1.78
LIMK1P53667 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC3.93□□□□□ -1.78
LIMK1P53667 WDR7-OT1-201ENST00000592032 565 ntTSL 4 BASIC3.93□□□□□ -1.78
LIMK1P53667 AC015726.1-201ENST00000602353 681 ntBASIC3.93□□□□□ -1.78
LIMK1P53667 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC3.93□□□□□ -1.78
LIMK1P53667 AL590282.1-201ENST00000610379 1136 ntBASIC3.93□□□□□ -1.78
LIMK1P53667 AC064801.1-201ENST00000612025 407 ntBASIC3.93□□□□□ -1.78
LIMK1P53667 MESTIT1_2.1-201ENST00000616328 235 ntBASIC3.93□□□□□ -1.78
LIMK1P53667 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC3.93□□□□□ -1.78
LIMK1P53667 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC3.93□□□□□ -1.78
LIMK1P53667 AC090897.3-201ENST00000636973 1157 ntBASIC3.93□□□□□ -1.78
LIMK1P53667 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
LIMK1P53667 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
LIMK1P53667 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
LIMK1P53667 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC3.93□□□□□ -1.78
LIMK1P53667 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
LIMK1P53667 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC3.93□□□□□ -1.78
LIMK1P53667 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
LIMK1P53667 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
LIMK1P53667 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC3.93□□□□□ -1.78
LIMK1P53667 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 102.2 ms