Protein–RNA interactions for Protein: P51532

SMARCA4, Transcription activator BRG1, humanhuman

Predictions only

Length 1,647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4P51532 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
SMARCA4P51532 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
SMARCA4P51532 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC4.29□□□□□ -1.72
SMARCA4P51532 MRRF-203ENST00000373723 1176 ntTSL 3 BASIC4.28□□□□□ -1.72
SMARCA4P51532 AL356806.1-201ENST00000422524 916 ntBASIC4.28□□□□□ -1.72
SMARCA4P51532 BTG3P1-201ENST00000435859 716 ntBASIC4.28□□□□□ -1.72
SMARCA4P51532 AC013410.1-201ENST00000436223 1232 ntBASIC4.28□□□□□ -1.72
SMARCA4P51532 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC4.28□□□□□ -1.72
SMARCA4P51532 AC104389.3-201ENST00000445629 235 ntBASIC4.28□□□□□ -1.72
SMARCA4P51532 AL354710.1-201ENST00000453641 246 ntBASIC4.28□□□□□ -1.72
SMARCA4P51532 AC026436.1-201ENST00000510537 270 ntBASIC4.28□□□□□ -1.72
SMARCA4P51532 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
SMARCA4P51532 EMP1-206ENST00000537612 505 ntTSL 3 BASIC4.28□□□□□ -1.72
SMARCA4P51532 AC123904.3-201ENST00000547218 814 ntBASIC4.28□□□□□ -1.72
SMARCA4P51532 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC4.28□□□□□ -1.72
SMARCA4P51532 ATP8A2P3-201ENST00000426792 1536 ntBASIC4.28□□□□□ -1.72
SMARCA4P51532 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
SMARCA4P51532 POPDC3-201ENST00000254765 1345 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
SMARCA4P51532 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
SMARCA4P51532 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC4.28□□□□□ -1.72
SMARCA4P51532 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC4.28□□□□□ -1.72
SMARCA4P51532 AL161781.1-201ENST00000354277 403 ntBASIC4.28□□□□□ -1.72
SMARCA4P51532 AL162578.1-201ENST00000406202 378 ntBASIC4.28□□□□□ -1.72
SMARCA4P51532 MTND6P18-201ENST00000439477 513 ntBASIC4.28□□□□□ -1.72
SMARCA4P51532 RN7SL499P-201ENST00000481141 276 ntBASIC4.28□□□□□ -1.72
SMARCA4P51532 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC4.28□□□□□ -1.72
SMARCA4P51532 AC117834.1-202ENST00000521203 561 ntTSL 4 BASIC4.28□□□□□ -1.72
SMARCA4P51532 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
SMARCA4P51532 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC4.28□□□□□ -1.72
SMARCA4P51532 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC4.28□□□□□ -1.72
SMARCA4P51532 AC055876.1-202ENST00000567053 138 ntBASIC4.28□□□□□ -1.72
SMARCA4P51532 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC4.28□□□□□ -1.72
SMARCA4P51532 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
SMARCA4P51532 ZNF355P-201ENST00000427301 3216 ntBASIC4.27□□□□□ -1.73
SMARCA4P51532 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC4.27□□□□□ -1.73
SMARCA4P51532 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC4.27□□□□□ -1.73
SMARCA4P51532 ST13P20-201ENST00000447996 1065 ntBASIC4.27□□□□□ -1.73
SMARCA4P51532 RPL23AP49-201ENST00000492925 468 ntBASIC4.27□□□□□ -1.73
SMARCA4P51532 AC079866.2-201ENST00000541870 515 ntTSL 3 BASIC4.27□□□□□ -1.73
SMARCA4P51532 AC026464.5-201ENST00000562497 722 ntBASIC4.27□□□□□ -1.73
SMARCA4P51532 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC4.27□□□□□ -1.73
SMARCA4P51532 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC4.27□□□□□ -1.73
SMARCA4P51532 GSTA9P-201ENST00000406231 611 ntBASIC4.26□□□□□ -1.73
SMARCA4P51532 AC106872.3-201ENST00000495104 446 ntBASIC4.26□□□□□ -1.73
SMARCA4P51532 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
SMARCA4P51532 AC018630.1-201ENST00000541376 925 ntBASIC4.26□□□□□ -1.73
SMARCA4P51532 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
SMARCA4P51532 AL161751.1-201ENST00000555636 1044 ntTSL 5 BASIC4.26□□□□□ -1.73
SMARCA4P51532 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
SMARCA4P51532 CUL1P1-201ENST00000509510 2425 ntBASIC4.26□□□□□ -1.73
SMARCA4P51532 OR4G2P-202ENST00000641004 1759 ntBASIC4.26□□□□□ -1.73
SMARCA4P51532 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
SMARCA4P51532 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
SMARCA4P51532 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
SMARCA4P51532 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC4.25□□□□□ -1.73
SMARCA4P51532 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC4.25□□□□□ -1.73
SMARCA4P51532 Z98742.2-201ENST00000431564 187 ntBASIC4.25□□□□□ -1.73
SMARCA4P51532 SUCLG2-AS1-203ENST00000496640 862 ntTSL 5 BASIC4.25□□□□□ -1.73
SMARCA4P51532 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC4.25□□□□□ -1.73
SMARCA4P51532 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC4.25□□□□□ -1.73
SMARCA4P51532 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC4.25□□□□□ -1.73
SMARCA4P51532 AC092851.1-201ENST00000535964 478 ntBASIC4.25□□□□□ -1.73
SMARCA4P51532 AC061975.8-201ENST00000587058 721 ntBASIC4.25□□□□□ -1.73
SMARCA4P51532 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC4.25□□□□□ -1.73
SMARCA4P51532 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
SMARCA4P51532 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC4.24□□□□□ -1.73
SMARCA4P51532 HSPD1P16-201ENST00000402302 394 ntBASIC4.24□□□□□ -1.73
SMARCA4P51532 AL158825.1-201ENST00000414735 521 ntBASIC4.24□□□□□ -1.73
SMARCA4P51532 TRBV1-201ENST00000476502 284 ntBASIC4.24□□□□□ -1.73
SMARCA4P51532 PLSCR5-203ENST00000492200 1058 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
SMARCA4P51532 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC4.24□□□□□ -1.73
SMARCA4P51532 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC4.24□□□□□ -1.73
SMARCA4P51532 MIR5007-201ENST00000583098 95 ntBASIC4.24□□□□□ -1.73
SMARCA4P51532 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC4.24□□□□□ -1.73
SMARCA4P51532 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC4.24□□□□□ -1.73
SMARCA4P51532 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
SMARCA4P51532 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
SMARCA4P51532 AC011037.1-201ENST00000483964 558 ntBASIC4.24□□□□□ -1.73
SMARCA4P51532 AC147055.1-201ENST00000509261 750 ntBASIC4.24□□□□□ -1.73
SMARCA4P51532 AC107222.1-201ENST00000510899 637 ntBASIC4.24□□□□□ -1.73
SMARCA4P51532 AC112673.1-201ENST00000513168 575 ntBASIC4.24□□□□□ -1.73
SMARCA4P51532 AC087468.1-201ENST00000604365 630 ntBASIC4.24□□□□□ -1.73
SMARCA4P51532 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.23□□□□□ -1.73
SMARCA4P51532 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
SMARCA4P51532 AL024509.2-201ENST00000493462 493 ntBASIC4.23□□□□□ -1.73
SMARCA4P51532 AC104090.1-201ENST00000506341 1171 ntBASIC4.23□□□□□ -1.73
SMARCA4P51532 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC4.23□□□□□ -1.73
SMARCA4P51532 AC110741.2-201ENST00000605278 268 ntBASIC4.23□□□□□ -1.73
SMARCA4P51532 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
SMARCA4P51532 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC4.22□□□□□ -1.73
SMARCA4P51532 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC4.22□□□□□ -1.73
SMARCA4P51532 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
SMARCA4P51532 SNORA64-201ENST00000384674 134 ntBASIC4.22□□□□□ -1.73
SMARCA4P51532 AC073136.2-201ENST00000417282 849 ntBASIC4.22□□□□□ -1.73
SMARCA4P51532 ATG3P1-201ENST00000419507 911 ntBASIC4.22□□□□□ -1.73
SMARCA4P51532 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC4.22□□□□□ -1.73
SMARCA4P51532 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC4.22□□□□□ -1.73
SMARCA4P51532 AC108860.1-201ENST00000484521 383 ntBASIC4.22□□□□□ -1.73
SMARCA4P51532 RNU4ATAC15P-201ENST00000516415 126 ntBASIC4.22□□□□□ -1.73
SMARCA4P51532 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC4.22□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 87.2 ms