Protein–RNA interactions for Protein: P48431

SOX2, Transcription factor SOX-2, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2P48431 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC3.99□□□□□ -1.77
SOX2P48431 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC3.99□□□□□ -1.77
SOX2P48431 RN7SL652P-201ENST00000577769 300 ntBASIC3.99□□□□□ -1.77
SOX2P48431 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC3.99□□□□□ -1.77
SOX2P48431 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC3.99□□□□□ -1.77
SOX2P48431 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC3.99□□□□□ -1.77
SOX2P48431 AL606834.2-201ENST00000602954 668 ntBASIC3.99□□□□□ -1.77
SOX2P48431 AC011468.4-201ENST00000603942 409 ntBASIC3.99□□□□□ -1.77
SOX2P48431 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC3.99□□□□□ -1.77
SOX2P48431 OR10AB1P-201ENST00000609613 938 ntBASIC3.99□□□□□ -1.77
SOX2P48431 AL592295.2-201ENST00000612578 206 ntBASIC3.99□□□□□ -1.77
SOX2P48431 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC3.99□□□□□ -1.77
SOX2P48431 AC090517.2-201ENST00000614966 680 ntBASIC3.99□□□□□ -1.77
SOX2P48431 SNX18P1Y-201ENST00000616231 511 ntBASIC3.99□□□□□ -1.77
SOX2P48431 AL138721.1-201ENST00000616756 179 ntBASIC3.99□□□□□ -1.77
SOX2P48431 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC3.99□□□□□ -1.77
SOX2P48431 HNF1A-AS1-205ENST00000619441 343 ntTSL 3 BASIC3.99□□□□□ -1.77
SOX2P48431 AC136475.10-201ENST00000620253 385 ntBASIC3.99□□□□□ -1.77
SOX2P48431 MIR4496-201ENST00000635896 61 ntBASIC3.99□□□□□ -1.77
SOX2P48431 AC010149.2-201ENST00000637608 315 ntBASIC3.99□□□□□ -1.77
SOX2P48431 MIR4302-201ENST00000638058 60 ntBASIC3.99□□□□□ -1.77
SOX2P48431 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC3.99□□□□□ -1.77
SOX2P48431 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC3.99□□□□□ -1.77
SOX2P48431 AC092125.1-201ENST00000562568 1995 ntBASIC3.99□□□□□ -1.77
SOX2P48431 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC3.99□□□□□ -1.77
SOX2P48431 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC3.99□□□□□ -1.77
SOX2P48431 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
SOX2P48431 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
SOX2P48431 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC3.99□□□□□ -1.77
SOX2P48431 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC3.99□□□□□ -1.77
SOX2P48431 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
SOX2P48431 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
SOX2P48431 Z73965.1-201ENST00000623412 2297 ntBASIC3.98□□□□□ -1.77
SOX2P48431 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC3.98□□□□□ -1.77
SOX2P48431 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC3.98□□□□□ -1.77
SOX2P48431 NXPH1-205ENST00000602349 1953 ntBASIC3.98□□□□□ -1.77
SOX2P48431 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC3.98□□□□□ -1.77
SOX2P48431 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
SOX2P48431 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC3.98□□□□□ -1.77
SOX2P48431 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
SOX2P48431 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
SOX2P48431 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
SOX2P48431 FRG1BP-201ENST00000278882 761 ntBASIC3.98□□□□□ -1.77
SOX2P48431 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
SOX2P48431 RNA5SP258-201ENST00000362750 119 ntBASIC3.98□□□□□ -1.77
SOX2P48431 U8.3-201ENST00000363321 132 ntBASIC3.98□□□□□ -1.77
SOX2P48431 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC3.98□□□□□ -1.77
SOX2P48431 MTND4LP20-201ENST00000402379 270 ntBASIC3.98□□□□□ -1.77
SOX2P48431 GSTA9P-201ENST00000406231 611 ntBASIC3.98□□□□□ -1.77
SOX2P48431 RNU2-15P-201ENST00000410692 191 ntBASIC3.98□□□□□ -1.77
SOX2P48431 AL359704.1-201ENST00000411586 781 ntBASIC3.98□□□□□ -1.77
SOX2P48431 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC3.98□□□□□ -1.77
SOX2P48431 BX295541.1-201ENST00000417774 250 ntBASIC3.98□□□□□ -1.77
SOX2P48431 GNRH1-202ENST00000421054 470 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
SOX2P48431 OR51AB1P-201ENST00000429046 620 ntBASIC3.98□□□□□ -1.77
SOX2P48431 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC3.98□□□□□ -1.77
SOX2P48431 PSPHP1-201ENST00000450062 261 ntBASIC3.98□□□□□ -1.77
SOX2P48431 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
SOX2P48431 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
SOX2P48431 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC3.98□□□□□ -1.77
SOX2P48431 ISCUP1-201ENST00000454451 448 ntBASIC3.98□□□□□ -1.77
SOX2P48431 RPS26P28-201ENST00000470806 348 ntBASIC3.98□□□□□ -1.77
SOX2P48431 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC3.98□□□□□ -1.77
SOX2P48431 AC011005.3-201ENST00000491624 395 ntBASIC3.98□□□□□ -1.77
SOX2P48431 AC012170.1-201ENST00000495139 359 ntBASIC3.98□□□□□ -1.77
SOX2P48431 KCTD9P5-201ENST00000504141 1170 ntBASIC3.98□□□□□ -1.77
SOX2P48431 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC3.98□□□□□ -1.77
SOX2P48431 AC108078.1-201ENST00000508073 725 ntBASIC3.98□□□□□ -1.77
SOX2P48431 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
SOX2P48431 BTF3P13-201ENST00000513224 490 ntBASIC3.98□□□□□ -1.77
SOX2P48431 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC3.98□□□□□ -1.77
SOX2P48431 Y_RNA.672-201ENST00000516289 104 ntBASIC3.98□□□□□ -1.77
SOX2P48431 AC008694.2-201ENST00000517591 306 ntBASIC3.98□□□□□ -1.77
SOX2P48431 AC022616.6-201ENST00000520479 119 ntBASIC3.98□□□□□ -1.77
SOX2P48431 AC018793.4-201ENST00000524542 585 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
SOX2P48431 AC105233.3-201ENST00000531125 744 ntBASIC3.98□□□□□ -1.77
SOX2P48431 OR10G5P-201ENST00000532733 358 ntBASIC3.98□□□□□ -1.77
SOX2P48431 AHI1-217ENST00000534469 680 ntTSL 3 BASIC3.98□□□□□ -1.77
SOX2P48431 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC3.98□□□□□ -1.77
SOX2P48431 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC3.98□□□□□ -1.77
SOX2P48431 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC3.98□□□□□ -1.77
SOX2P48431 CENPUP2-201ENST00000555897 1186 ntBASIC3.98□□□□□ -1.77
SOX2P48431 MTND6P33-201ENST00000571794 183 ntBASIC3.98□□□□□ -1.77
SOX2P48431 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC3.98□□□□□ -1.77
SOX2P48431 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC3.98□□□□□ -1.77
SOX2P48431 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC3.98□□□□□ -1.77
SOX2P48431 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC3.98□□□□□ -1.77
SOX2P48431 DUXAP4-201ENST00000603046 613 ntBASIC3.98□□□□□ -1.77
SOX2P48431 AL391358.1-201ENST00000605342 190 ntBASIC3.98□□□□□ -1.77
SOX2P48431 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC3.98□□□□□ -1.77
SOX2P48431 AC091905.4-201ENST00000623432 202 ntBASIC3.98□□□□□ -1.77
SOX2P48431 AC068880.5-201ENST00000624331 290 ntBASIC3.98□□□□□ -1.77
SOX2P48431 AC124864.2-201ENST00000624736 186 ntBASIC3.98□□□□□ -1.77
SOX2P48431 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC3.98□□□□□ -1.77
SOX2P48431 AC018793.1-201ENST00000638166 585 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
SOX2P48431 CCDC178-209ENST00000579947 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC3.98□□□□□ -1.77
SOX2P48431 ZNF734P-201ENST00000419494 1534 ntBASIC3.98□□□□□ -1.77
SOX2P48431 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC3.98□□□□□ -1.77
SOX2P48431 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
SOX2P48431 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC3.97□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 110.3 ms