Protein–RNA interactions for Protein: P45452

MMP13, Collagenase 3, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP13P45452 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC4.36□□□□□ -1.71
MMP13P45452 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
MMP13P45452 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC4.35□□□□□ -1.71
MMP13P45452 RPL21P132-201ENST00000331267 462 ntBASIC4.35□□□□□ -1.71
MMP13P45452 RPL23AP29-201ENST00000397284 453 ntBASIC4.35□□□□□ -1.71
MMP13P45452 MTCYBP36-201ENST00000404146 440 ntBASIC4.35□□□□□ -1.71
MMP13P45452 AL590290.1-201ENST00000405336 380 ntBASIC4.35□□□□□ -1.71
MMP13P45452 RPL23AP47-201ENST00000408017 460 ntBASIC4.35□□□□□ -1.71
MMP13P45452 RNU4-25P-201ENST00000410569 230 ntBASIC4.35□□□□□ -1.71
MMP13P45452 FAR2P2-201ENST00000413041 594 ntBASIC4.35□□□□□ -1.71
MMP13P45452 OR51A3P-201ENST00000413596 924 ntBASIC4.35□□□□□ -1.71
MMP13P45452 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC4.35□□□□□ -1.71
MMP13P45452 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC4.35□□□□□ -1.71
MMP13P45452 AL391219.1-201ENST00000422570 483 ntBASIC4.35□□□□□ -1.71
MMP13P45452 FAR2P4-202ENST00000425399 584 ntBASIC4.35□□□□□ -1.71
MMP13P45452 AC011742.1-201ENST00000431448 434 ntBASIC4.35□□□□□ -1.71
MMP13P45452 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC4.35□□□□□ -1.71
MMP13P45452 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC4.35□□□□□ -1.71
MMP13P45452 ACTR3P2-201ENST00000439585 1257 ntBASIC4.35□□□□□ -1.71
MMP13P45452 HMGB3P9-201ENST00000441799 583 ntBASIC4.35□□□□□ -1.71
MMP13P45452 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC4.35□□□□□ -1.71
MMP13P45452 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC4.35□□□□□ -1.71
MMP13P45452 RPL23AP35-201ENST00000451906 501 ntBASIC4.35□□□□□ -1.71
MMP13P45452 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC4.35□□□□□ -1.71
MMP13P45452 TRBV8-2-201ENST00000475637 270 ntBASIC4.35□□□□□ -1.71
MMP13P45452 AC104687.1-201ENST00000485829 412 ntBASIC4.35□□□□□ -1.71
MMP13P45452 AHI1-208ENST00000488690 712 ntTSL 5 BASIC4.35□□□□□ -1.71
MMP13P45452 AC111193.1-201ENST00000504097 155 ntBASIC4.35□□□□□ -1.71
MMP13P45452 SNX5P1-201ENST00000505757 1041 ntBASIC4.35□□□□□ -1.71
MMP13P45452 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC4.35□□□□□ -1.71
MMP13P45452 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC4.35□□□□□ -1.71
MMP13P45452 AC008802.1-201ENST00000519121 791 ntBASIC4.35□□□□□ -1.71
MMP13P45452 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC4.35□□□□□ -1.71
MMP13P45452 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC4.35□□□□□ -1.71
MMP13P45452 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC4.35□□□□□ -1.71
MMP13P45452 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC4.35□□□□□ -1.71
MMP13P45452 AL390816.3-201ENST00000604527 1066 ntBASIC4.35□□□□□ -1.71
MMP13P45452 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC4.35□□□□□ -1.71
MMP13P45452 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC4.35□□□□□ -1.71
MMP13P45452 AC092794.2-201ENST00000620933 563 ntBASIC4.35□□□□□ -1.71
MMP13P45452 AC008013.2-202ENST00000637965 364 ntBASIC4.35□□□□□ -1.71
MMP13P45452 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
MMP13P45452 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC4.35□□□□□ -1.71
MMP13P45452 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
MMP13P45452 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
MMP13P45452 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
MMP13P45452 AC027287.1-201ENST00000553115 1453 ntBASIC4.35□□□□□ -1.71
MMP13P45452 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
MMP13P45452 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
MMP13P45452 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC4.35□□□□□ -1.71
MMP13P45452 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC4.35□□□□□ -1.71
MMP13P45452 RNF6P1-201ENST00000444889 1784 ntBASIC4.35□□□□□ -1.71
MMP13P45452 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
MMP13P45452 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC4.34□□□□□ -1.71
MMP13P45452 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC4.34□□□□□ -1.71
MMP13P45452 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
MMP13P45452 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
MMP13P45452 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.71
MMP13P45452 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
MMP13P45452 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC4.34□□□□□ -1.71
MMP13P45452 RNU1-14P-201ENST00000362759 152 ntBASIC4.34□□□□□ -1.71
MMP13P45452 RNA5SP322-201ENST00000363617 119 ntBASIC4.34□□□□□ -1.71
MMP13P45452 RNU1-132P-201ENST00000364300 164 ntBASIC4.34□□□□□ -1.71
MMP13P45452 Y_RNA.256-201ENST00000364594 104 ntBASIC4.34□□□□□ -1.71
MMP13P45452 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC4.34□□□□□ -1.71
MMP13P45452 RPL17P50-201ENST00000396131 546 ntBASIC4.34□□□□□ -1.71
MMP13P45452 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
MMP13P45452 RNA5SP36-201ENST00000410197 133 ntBASIC4.34□□□□□ -1.71
MMP13P45452 RN7SKP235-201ENST00000410662 305 ntBASIC4.34□□□□□ -1.71
MMP13P45452 USP9YP6-201ENST00000413550 854 ntBASIC4.34□□□□□ -1.71
MMP13P45452 CCDC58P2-201ENST00000417131 366 ntBASIC4.34□□□□□ -1.71
MMP13P45452 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC4.34□□□□□ -1.71
MMP13P45452 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC4.34□□□□□ -1.71
MMP13P45452 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC4.34□□□□□ -1.71
MMP13P45452 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC4.34□□□□□ -1.71
MMP13P45452 RPL7P4-203ENST00000430239 730 ntBASIC4.34□□□□□ -1.71
MMP13P45452 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC4.34□□□□□ -1.71
MMP13P45452 AF228730.2-201ENST00000438784 848 ntBASIC4.34□□□□□ -1.71
MMP13P45452 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
MMP13P45452 HMGB3P21-201ENST00000452483 547 ntBASIC4.34□□□□□ -1.71
MMP13P45452 USP9YP34-201ENST00000453983 808 ntBASIC4.34□□□□□ -1.71
MMP13P45452 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC4.34□□□□□ -1.71
MMP13P45452 BX248409.1-201ENST00000455497 255 ntBASIC4.34□□□□□ -1.71
MMP13P45452 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC4.34□□□□□ -1.71
MMP13P45452 RN7SL481P-201ENST00000477764 299 ntBASIC4.34□□□□□ -1.71
MMP13P45452 RN7SL691P-201ENST00000494487 301 ntBASIC4.34□□□□□ -1.71
MMP13P45452 SETP14-201ENST00000497538 873 ntBASIC4.34□□□□□ -1.71
MMP13P45452 AL035404.1-201ENST00000497982 568 ntBASIC4.34□□□□□ -1.71
MMP13P45452 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC4.34□□□□□ -1.71
MMP13P45452 FAM92A1P2-202ENST00000504766 877 ntBASIC4.34□□□□□ -1.71
MMP13P45452 AC011352.3-201ENST00000505162 593 ntBASIC4.34□□□□□ -1.71
MMP13P45452 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC4.34□□□□□ -1.71
MMP13P45452 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC4.34□□□□□ -1.71
MMP13P45452 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC4.34□□□□□ -1.71
MMP13P45452 RNA5SP49-201ENST00000516450 115 ntBASIC4.34□□□□□ -1.71
MMP13P45452 RNA5SP519-201ENST00000516480 119 ntBASIC4.34□□□□□ -1.71
MMP13P45452 RNU6-885P-201ENST00000516607 104 ntBASIC4.34□□□□□ -1.71
MMP13P45452 RNA5SP73-201ENST00000516744 108 ntBASIC4.34□□□□□ -1.71
MMP13P45452 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC4.34□□□□□ -1.71
MMP13P45452 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC4.34□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 95.1 ms