Protein–RNA interactions for Protein: P40939

HADHA, Trifunctional enzyme subunit alpha, mitochondrial, humanhuman

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHAP40939 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC4.07□□□□□ -1.76
HADHAP40939 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
HADHAP40939 VN1R85P-201ENST00000601587 426 ntBASIC4.07□□□□□ -1.76
HADHAP40939 AC093424.1-201ENST00000604999 338 ntBASIC4.07□□□□□ -1.76
HADHAP40939 AC112220.3-201ENST00000605502 502 ntBASIC4.07□□□□□ -1.76
HADHAP40939 AC055876.5-201ENST00000605667 259 ntBASIC4.07□□□□□ -1.76
HADHAP40939 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC4.07□□□□□ -1.76
HADHAP40939 AC092106.3-201ENST00000611308 722 ntBASIC4.07□□□□□ -1.76
HADHAP40939 AC024941.1-201ENST00000612250 334 ntBASIC4.07□□□□□ -1.76
HADHAP40939 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC4.07□□□□□ -1.76
HADHAP40939 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC4.07□□□□□ -1.76
HADHAP40939 AP000484.1-201ENST00000620067 1252 ntBASIC4.07□□□□□ -1.76
HADHAP40939 AC004009.2-201ENST00000623016 728 ntBASIC4.07□□□□□ -1.76
HADHAP40939 AC112200.1-201ENST00000625015 234 ntBASIC4.07□□□□□ -1.76
HADHAP40939 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
HADHAP40939 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC4.07□□□□□ -1.76
HADHAP40939 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
HADHAP40939 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
HADHAP40939 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
HADHAP40939 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
HADHAP40939 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC4.06□□□□□ -1.76
HADHAP40939 AP002907.1-201ENST00000606361 1430 ntBASIC4.06□□□□□ -1.76
HADHAP40939 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
HADHAP40939 AP000568.1-201ENST00000282964 442 ntBASIC4.06□□□□□ -1.76
HADHAP40939 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
HADHAP40939 RNA5SP258-201ENST00000362750 119 ntBASIC4.06□□□□□ -1.76
HADHAP40939 RNU6-263P-201ENST00000363811 107 ntBASIC4.06□□□□□ -1.76
HADHAP40939 RNA5SP515-201ENST00000364570 118 ntBASIC4.06□□□□□ -1.76
HADHAP40939 RNU6-157P-201ENST00000383957 107 ntBASIC4.06□□□□□ -1.76
HADHAP40939 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
HADHAP40939 RNU11-4P-201ENST00000391149 133 ntBASIC4.06□□□□□ -1.76
HADHAP40939 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC4.06□□□□□ -1.76
HADHAP40939 RNU2-15P-201ENST00000410692 191 ntBASIC4.06□□□□□ -1.76
HADHAP40939 RNU4-78P-201ENST00000410940 126 ntBASIC4.06□□□□□ -1.76
HADHAP40939 HSPE1P12-201ENST00000412576 301 ntBASIC4.06□□□□□ -1.76
HADHAP40939 MTCO2P5-201ENST00000422621 426 ntBASIC4.06□□□□□ -1.76
HADHAP40939 EZH2P1-201ENST00000431167 291 ntBASIC4.06□□□□□ -1.76
HADHAP40939 KCTD9P3-201ENST00000434597 1169 ntBASIC4.06□□□□□ -1.76
HADHAP40939 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC4.06□□□□□ -1.76
HADHAP40939 AL162151.2-201ENST00000448875 158 ntBASIC4.06□□□□□ -1.76
HADHAP40939 SNRPGP3-201ENST00000469405 227 ntBASIC4.06□□□□□ -1.76
HADHAP40939 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC4.06□□□□□ -1.76
HADHAP40939 MTCYBP17-201ENST00000503579 789 ntBASIC4.06□□□□□ -1.76
HADHAP40939 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC4.06□□□□□ -1.76
HADHAP40939 TMEM251P1-201ENST00000503717 318 ntBASIC4.06□□□□□ -1.76
HADHAP40939 AC091951.3-201ENST00000504093 246 ntBASIC4.06□□□□□ -1.76
HADHAP40939 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC4.06□□□□□ -1.76
HADHAP40939 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC4.06□□□□□ -1.76
HADHAP40939 RNA5SP216-201ENST00000516111 123 ntBASIC4.06□□□□□ -1.76
HADHAP40939 SNORA70.14-201ENST00000516205 110 ntBASIC4.06□□□□□ -1.76
HADHAP40939 MIR2114-201ENST00000516645 80 ntBASIC4.06□□□□□ -1.76
HADHAP40939 AC023442.2-201ENST00000526455 270 ntTSL 3 BASIC4.06□□□□□ -1.76
HADHAP40939 DEFB131D-201ENST00000526803 184 ntBASIC4.06□□□□□ -1.76
HADHAP40939 MTCYBP41-201ENST00000528913 1123 ntBASIC4.06□□□□□ -1.76
HADHAP40939 AL139174.1-201ENST00000531489 886 ntBASIC4.06□□□□□ -1.76
HADHAP40939 PDCL2P2-201ENST00000533651 189 ntBASIC4.06□□□□□ -1.76
HADHAP40939 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC4.06□□□□□ -1.76
HADHAP40939 AC092851.1-201ENST00000535964 478 ntBASIC4.06□□□□□ -1.76
HADHAP40939 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC4.06□□□□□ -1.76
HADHAP40939 AC084824.1-201ENST00000550917 1005 ntBASIC4.06□□□□□ -1.76
HADHAP40939 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC4.06□□□□□ -1.76
HADHAP40939 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC4.06□□□□□ -1.76
HADHAP40939 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC4.06□□□□□ -1.76
HADHAP40939 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC4.06□□□□□ -1.76
HADHAP40939 MAGOH2P-202ENST00000584384 429 ntBASIC4.06□□□□□ -1.76
HADHAP40939 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC4.06□□□□□ -1.76
HADHAP40939 AC020914.4-201ENST00000597690 277 ntBASIC4.06□□□□□ -1.76
HADHAP40939 AL158042.1-201ENST00000605338 460 ntBASIC4.06□□□□□ -1.76
HADHAP40939 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC4.06□□□□□ -1.76
HADHAP40939 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC4.06□□□□□ -1.76
HADHAP40939 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
HADHAP40939 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC4.06□□□□□ -1.76
HADHAP40939 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
HADHAP40939 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC4.05□□□□□ -1.76
HADHAP40939 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
HADHAP40939 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC4.05□□□□□ -1.76
HADHAP40939 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
HADHAP40939 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC4.05□□□□□ -1.76
HADHAP40939 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
HADHAP40939 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
HADHAP40939 RPL23AP57-201ENST00000332361 466 ntBASIC4.05□□□□□ -1.76
HADHAP40939 AL008987.1-201ENST00000415528 237 ntBASIC4.05□□□□□ -1.76
HADHAP40939 RPS7P15-201ENST00000415804 584 ntBASIC4.05□□□□□ -1.76
HADHAP40939 MTCYBP38-201ENST00000417160 1123 ntBASIC4.05□□□□□ -1.76
HADHAP40939 MTND1P32-201ENST00000433043 938 ntBASIC4.05□□□□□ -1.76
HADHAP40939 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC4.05□□□□□ -1.76
HADHAP40939 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC4.05□□□□□ -1.76
HADHAP40939 RPS25P9-201ENST00000435591 252 ntBASIC4.05□□□□□ -1.76
HADHAP40939 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC4.05□□□□□ -1.76
HADHAP40939 HSPE1P28-201ENST00000443139 211 ntBASIC4.05□□□□□ -1.76
HADHAP40939 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC4.05□□□□□ -1.76
HADHAP40939 EXTL2P1-201ENST00000446218 416 ntBASIC4.05□□□□□ -1.76
HADHAP40939 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC4.05□□□□□ -1.76
HADHAP40939 RSL24D1P3-201ENST00000449255 495 ntBASIC4.05□□□□□ -1.76
HADHAP40939 GAS5-223ENST00000452197 483 ntTSL 3 BASIC4.05□□□□□ -1.76
HADHAP40939 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC4.05□□□□□ -1.76
HADHAP40939 IGKV2D-23-201ENST00000518179 286 ntBASIC4.05□□□□□ -1.76
HADHAP40939 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC4.05□□□□□ -1.76
HADHAP40939 AC022861.1-201ENST00000522981 663 ntBASIC4.05□□□□□ -1.76
HADHAP40939 RGS5-218ENST00000526176 574 ntTSL 4 BASIC4.05□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 81.2 ms