Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC4.8□□□□□ -1.64
COL15A1P39059 RN7SKP13-201ENST00000515933 244 ntBASIC4.8□□□□□ -1.64
COL15A1P39059 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC4.8□□□□□ -1.64
COL15A1P39059 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC4.8□□□□□ -1.64
COL15A1P39059 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC4.8□□□□□ -1.64
COL15A1P39059 AC012435.1-202ENST00000568772 240 ntBASIC4.8□□□□□ -1.64
COL15A1P39059 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC4.8□□□□□ -1.64
COL15A1P39059 AL031985.2-201ENST00000600955 480 ntBASIC4.8□□□□□ -1.64
COL15A1P39059 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC4.8□□□□□ -1.64
COL15A1P39059 AC004223.4-201ENST00000612426 332 ntBASIC4.8□□□□□ -1.64
COL15A1P39059 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC4.8□□□□□ -1.64
COL15A1P39059 AL392088.2-201ENST00000637607 285 ntBASIC4.8□□□□□ -1.64
COL15A1P39059 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC4.8□□□□□ -1.64
COL15A1P39059 MKKS-204ENST00000639674 192 ntBASIC4.8□□□□□ -1.64
COL15A1P39059 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
COL15A1P39059 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
COL15A1P39059 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC4.8□□□□□ -1.64
COL15A1P39059 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
COL15A1P39059 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
COL15A1P39059 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC4.8□□□□□ -1.64
COL15A1P39059 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
COL15A1P39059 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
COL15A1P39059 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC4.8□□□□□ -1.64
COL15A1P39059 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC4.79□□□□□ -1.64
COL15A1P39059 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC4.79□□□□□ -1.64
COL15A1P39059 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
COL15A1P39059 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC4.79□□□□□ -1.64
COL15A1P39059 SUGT1P1-201ENST00000379514 476 ntBASIC4.79□□□□□ -1.64
COL15A1P39059 RPS15AP38-201ENST00000413110 372 ntBASIC4.79□□□□□ -1.64
COL15A1P39059 PRELID3BP11-201ENST00000414230 479 ntBASIC4.79□□□□□ -1.64
COL15A1P39059 RPS7P15-201ENST00000415804 584 ntBASIC4.79□□□□□ -1.64
COL15A1P39059 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC4.79□□□□□ -1.64
COL15A1P39059 MTCO3P1-205ENST00000422088 832 ntBASIC4.79□□□□□ -1.64
COL15A1P39059 AL035407.1-201ENST00000429211 571 ntBASIC4.79□□□□□ -1.64
COL15A1P39059 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC4.79□□□□□ -1.64
COL15A1P39059 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC4.79□□□□□ -1.64
COL15A1P39059 TMX2P1-201ENST00000436507 708 ntBASIC4.79□□□□□ -1.64
COL15A1P39059 ISCA1P2-201ENST00000438679 421 ntBASIC4.79□□□□□ -1.64
COL15A1P39059 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC4.79□□□□□ -1.64
COL15A1P39059 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC4.79□□□□□ -1.64
COL15A1P39059 MTCO3P16-201ENST00000454456 754 ntBASIC4.79□□□□□ -1.64
COL15A1P39059 MTCO3P11-201ENST00000455103 774 ntBASIC4.79□□□□□ -1.64
COL15A1P39059 RPL30P6-201ENST00000475925 342 ntBASIC4.79□□□□□ -1.64
COL15A1P39059 UBA52P3-201ENST00000491303 382 ntBASIC4.79□□□□□ -1.64
COL15A1P39059 AC104685.1-201ENST00000502445 371 ntBASIC4.79□□□□□ -1.64
COL15A1P39059 HSPD1P15-201ENST00000505573 1122 ntBASIC4.79□□□□□ -1.64
COL15A1P39059 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC4.79□□□□□ -1.64
COL15A1P39059 RAC1P2-201ENST00000511164 579 ntBASIC4.79□□□□□ -1.64
COL15A1P39059 HMGB3P13-201ENST00000511263 607 ntBASIC4.79□□□□□ -1.64
COL15A1P39059 MTND5P13-201ENST00000513046 1079 ntBASIC4.79□□□□□ -1.64
COL15A1P39059 RNU6-202P-201ENST00000515998 96 ntBASIC4.79□□□□□ -1.64
COL15A1P39059 AC007458.1-201ENST00000542812 373 ntBASIC4.79□□□□□ -1.64
COL15A1P39059 AKIRIN1P1-201ENST00000547384 544 ntBASIC4.79□□□□□ -1.64
COL15A1P39059 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
COL15A1P39059 AC090877.1-201ENST00000561418 344 ntBASIC4.79□□□□□ -1.64
COL15A1P39059 AP005136.1-201ENST00000579765 429 ntBASIC4.79□□□□□ -1.64
COL15A1P39059 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC4.79□□□□□ -1.64
COL15A1P39059 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC4.79□□□□□ -1.64
COL15A1P39059 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC4.79□□□□□ -1.64
COL15A1P39059 AC020914.6-201ENST00000594327 272 ntBASIC4.79□□□□□ -1.64
COL15A1P39059 VN1R90P-201ENST00000595717 726 ntBASIC4.79□□□□□ -1.64
COL15A1P39059 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC4.79□□□□□ -1.64
COL15A1P39059 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC4.79□□□□□ -1.64
COL15A1P39059 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC4.79□□□□□ -1.64
COL15A1P39059 AC079684.1-201ENST00000621405 437 ntBASIC4.79□□□□□ -1.64
COL15A1P39059 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
COL15A1P39059 CDR1-202ENST00000625883 1485 ntBASIC4.79□□□□□ -1.64
COL15A1P39059 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
COL15A1P39059 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
COL15A1P39059 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC4.79□□□□□ -1.64
COL15A1P39059 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
COL15A1P39059 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
COL15A1P39059 SCN1A-220ENST00000641603 12506 ntBASIC4.79□□□□□ -1.64
COL15A1P39059 AL391994.1-201ENST00000254724 282 ntBASIC4.78□□□□□ -1.64
COL15A1P39059 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
COL15A1P39059 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
COL15A1P39059 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
COL15A1P39059 Y_RNA.111-201ENST00000363248 100 ntBASIC4.78□□□□□ -1.64
COL15A1P39059 SNORA4.1-201ENST00000364263 144 ntBASIC4.78□□□□□ -1.64
COL15A1P39059 RNU6-621P-201ENST00000364752 109 ntBASIC4.78□□□□□ -1.64
COL15A1P39059 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC4.78□□□□□ -1.64
COL15A1P39059 CYCSP4-201ENST00000429682 331 ntBASIC4.78□□□□□ -1.64
COL15A1P39059 AC098826.1-201ENST00000433943 471 ntBASIC4.78□□□□□ -1.64
COL15A1P39059 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC4.78□□□□□ -1.64
COL15A1P39059 AL117351.1-201ENST00000438864 766 ntBASIC4.78□□□□□ -1.64
COL15A1P39059 RPL23AP35-201ENST00000451906 501 ntBASIC4.78□□□□□ -1.64
COL15A1P39059 MTND4LP3-201ENST00000468320 276 ntBASIC4.78□□□□□ -1.64
COL15A1P39059 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC4.78□□□□□ -1.64
COL15A1P39059 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC4.78□□□□□ -1.64
COL15A1P39059 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC4.78□□□□□ -1.64
COL15A1P39059 AC091435.1-201ENST00000505442 584 ntBASIC4.78□□□□□ -1.64
COL15A1P39059 RNU6-488P-201ENST00000515918 99 ntBASIC4.78□□□□□ -1.64
COL15A1P39059 RN7SKP96-201ENST00000516948 297 ntBASIC4.78□□□□□ -1.64
COL15A1P39059 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC4.78□□□□□ -1.64
COL15A1P39059 OR5AK1P-201ENST00000524837 922 ntBASIC4.78□□□□□ -1.64
COL15A1P39059 AC107016.1-201ENST00000550463 337 ntBASIC4.78□□□□□ -1.64
COL15A1P39059 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC4.78□□□□□ -1.64
COL15A1P39059 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC4.78□□□□□ -1.64
COL15A1P39059 MEG8-215ENST00000555354 469 ntTSL 3 BASIC4.78□□□□□ -1.64
COL15A1P39059 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC4.78□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 83.8 ms