Protein–RNA interactions for Protein: P37840

SNCA, Alpha-synuclein, humanhuman

Predictions only

Length 140 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAP37840 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC2.2□□□□□ -2.06
SNCAP37840 GXYLT1P5-202ENST00000618830 589 ntTSL 5 BASIC2.2□□□□□ -2.06
SNCAP37840 MIR6075-201ENST00000620782 95 ntBASIC2.2□□□□□ -2.06
SNCAP37840 SLC35A1-205ENST00000622775 1206 ntTSL 5 BASIC2.2□□□□□ -2.06
SNCAP37840 AC145207.9-201ENST00000623802 325 ntBASIC2.2□□□□□ -2.06
SNCAP37840 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
SNCAP37840 AL512283.1-201ENST00000606756 1384 ntBASIC2.2□□□□□ -2.06
SNCAP37840 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
SNCAP37840 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.2□□□□□ -2.06
SNCAP37840 AL122126.1-201ENST00000546905 1318 ntBASIC2.19□□□□□ -2.06
SNCAP37840 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.19□□□□□ -2.06
SNCAP37840 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.19□□□□□ -2.06
SNCAP37840 RNU1-85P-201ENST00000364127 164 ntBASIC2.19□□□□□ -2.06
SNCAP37840 MIR144-201ENST00000384886 86 ntBASIC2.19□□□□□ -2.06
SNCAP37840 MIR670-201ENST00000390142 98 ntBASIC2.19□□□□□ -2.06
SNCAP37840 AL024507.1-201ENST00000412741 274 ntBASIC2.19□□□□□ -2.06
SNCAP37840 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC2.19□□□□□ -2.06
SNCAP37840 AC241520.1-201ENST00000422654 1099 ntBASIC2.19□□□□□ -2.06
SNCAP37840 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC2.19□□□□□ -2.06
SNCAP37840 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC2.19□□□□□ -2.06
SNCAP37840 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC2.19□□□□□ -2.06
SNCAP37840 RPL21P133-201ENST00000443666 476 ntBASIC2.19□□□□□ -2.06
SNCAP37840 MORF4L1P4-201ENST00000450245 976 ntBASIC2.19□□□□□ -2.06
SNCAP37840 FTH1P2-201ENST00000466086 412 ntBASIC2.19□□□□□ -2.06
SNCAP37840 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC2.19□□□□□ -2.06
SNCAP37840 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC2.19□□□□□ -2.06
SNCAP37840 RPL7L1P13-201ENST00000511702 739 ntBASIC2.19□□□□□ -2.06
SNCAP37840 AC091826.1-201ENST00000514065 313 ntBASIC2.19□□□□□ -2.06
SNCAP37840 RNA5SP367-201ENST00000516557 118 ntBASIC2.19□□□□□ -2.06
SNCAP37840 RN7SKP234-201ENST00000517173 224 ntBASIC2.19□□□□□ -2.06
SNCAP37840 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC2.19□□□□□ -2.06
SNCAP37840 AC005412.1-201ENST00000580812 1049 ntBASIC2.19□□□□□ -2.06
SNCAP37840 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.19□□□□□ -2.06
SNCAP37840 AC024153.1-201ENST00000603103 365 ntBASIC2.19□□□□□ -2.06
SNCAP37840 AC091046.2-201ENST00000620775 665 ntBASIC2.19□□□□□ -2.06
SNCAP37840 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC2.19□□□□□ -2.06
SNCAP37840 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
SNCAP37840 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.19□□□□□ -2.06
SNCAP37840 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.19□□□□□ -2.06
SNCAP37840 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
SNCAP37840 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
SNCAP37840 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
SNCAP37840 ANAPC10P1-201ENST00000395991 556 ntBASIC2.18□□□□□ -2.06
SNCAP37840 EIF4EBP2P3-201ENST00000403144 334 ntBASIC2.18□□□□□ -2.06
SNCAP37840 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC2.18□□□□□ -2.06
SNCAP37840 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC2.18□□□□□ -2.06
SNCAP37840 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC2.18□□□□□ -2.06
SNCAP37840 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC2.18□□□□□ -2.06
SNCAP37840 HSFY3P-201ENST00000444242 1191 ntBASIC2.18□□□□□ -2.06
SNCAP37840 RPL6P5-201ENST00000445678 828 ntBASIC2.18□□□□□ -2.06
SNCAP37840 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC2.18□□□□□ -2.06
SNCAP37840 NUCB2-202ENST00000458064 1279 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
SNCAP37840 AC104472.2-201ENST00000469035 601 ntBASIC2.18□□□□□ -2.06
SNCAP37840 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
SNCAP37840 RPL23AP55-201ENST00000498163 452 ntBASIC2.18□□□□□ -2.06
SNCAP37840 INPP4B-206ENST00000506217 673 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
SNCAP37840 RPL37P25-201ENST00000507308 276 ntBASIC2.18□□□□□ -2.06
SNCAP37840 CFL2-206ENST00000556161 546 ntTSL 4 BASIC2.18□□□□□ -2.06
SNCAP37840 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC2.18□□□□□ -2.06
SNCAP37840 MIR5194-201ENST00000582634 120 ntBASIC2.18□□□□□ -2.06
SNCAP37840 AL159169.3-201ENST00000608871 561 ntBASIC2.18□□□□□ -2.06
SNCAP37840 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.18□□□□□ -2.06
SNCAP37840 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC2.18□□□□□ -2.06
SNCAP37840 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
SNCAP37840 BANCR-201ENST00000624238 473 ntTSL 2 BASIC2.18□□□□□ -2.06
SNCAP37840 MIR3651-201ENST00000630427 90 ntBASIC2.18□□□□□ -2.06
SNCAP37840 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.18□□□□□ -2.06
SNCAP37840 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
SNCAP37840 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.18□□□□□ -2.06
SNCAP37840 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
SNCAP37840 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.17□□□□□ -2.06
SNCAP37840 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC2.17□□□□□ -2.06
SNCAP37840 EEF1A1P41-201ENST00000414667 207 ntBASIC2.17□□□□□ -2.06
SNCAP37840 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC2.17□□□□□ -2.06
SNCAP37840 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC2.17□□□□□ -2.06
SNCAP37840 AL512649.1-201ENST00000428997 581 ntBASIC2.17□□□□□ -2.06
SNCAP37840 AL035706.1-201ENST00000439186 683 ntTSL 3 BASIC2.17□□□□□ -2.06
SNCAP37840 RPS12P2-201ENST00000439728 269 ntBASIC2.17□□□□□ -2.06
SNCAP37840 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC2.17□□□□□ -2.06
SNCAP37840 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC2.17□□□□□ -2.06
SNCAP37840 RPL37P4-201ENST00000448908 268 ntBASIC2.17□□□□□ -2.06
SNCAP37840 NF1P3-201ENST00000457709 450 ntBASIC2.17□□□□□ -2.06
SNCAP37840 RPL7P49-201ENST00000471402 708 ntBASIC2.17□□□□□ -2.06
SNCAP37840 AC126121.1-201ENST00000482313 553 ntBASIC2.17□□□□□ -2.06
SNCAP37840 NCOR1P1-202ENST00000486162 291 ntBASIC2.17□□□□□ -2.06
SNCAP37840 C1GALT1P2-201ENST00000510813 1104 ntBASIC2.17□□□□□ -2.06
SNCAP37840 ZDHHC20P3-201ENST00000531576 336 ntBASIC2.17□□□□□ -2.06
SNCAP37840 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC2.17□□□□□ -2.06
SNCAP37840 AC123904.3-201ENST00000547218 814 ntBASIC2.17□□□□□ -2.06
SNCAP37840 BDH2P1-201ENST00000602288 736 ntBASIC2.17□□□□□ -2.06
SNCAP37840 AC073387.2-201ENST00000604797 784 ntBASIC2.17□□□□□ -2.06
SNCAP37840 AL161912.3-201ENST00000605404 628 ntBASIC2.17□□□□□ -2.06
SNCAP37840 YPEL5P2-201ENST00000605553 359 ntBASIC2.17□□□□□ -2.06
SNCAP37840 ZNF701-207ENST00000611267 1136 ntTSL 2 BASIC2.17□□□□□ -2.06
SNCAP37840 AC011890.2-201ENST00000613393 294 ntBASIC2.17□□□□□ -2.06
SNCAP37840 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC2.17□□□□□ -2.06
SNCAP37840 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
SNCAP37840 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
SNCAP37840 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC2.16□□□□□ -2.06
SNCAP37840 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 110.1 ms