Protein–RNA interactions for Protein: P32297

CHRNA3, Neuronal acetylcholine receptor subunit alpha-3, humanhuman

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3P32297 AC023598.1-201ENST00000472521 361 ntBASIC3.69□□□□□ -1.82
CHRNA3P32297 AC021205.2-201ENST00000480069 347 ntBASIC3.69□□□□□ -1.82
CHRNA3P32297 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC3.69□□□□□ -1.82
CHRNA3P32297 AC091860.1-201ENST00000505723 432 ntBASIC3.69□□□□□ -1.82
CHRNA3P32297 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC3.69□□□□□ -1.82
CHRNA3P32297 TPT1P8-201ENST00000510120 555 ntBASIC3.69□□□□□ -1.82
CHRNA3P32297 RNU6-415P-201ENST00000516252 97 ntBASIC3.69□□□□□ -1.82
CHRNA3P32297 RNU4ATAC10P-201ENST00000516967 122 ntBASIC3.69□□□□□ -1.82
CHRNA3P32297 RANP9-201ENST00000519957 271 ntBASIC3.69□□□□□ -1.82
CHRNA3P32297 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC3.69□□□□□ -1.82
CHRNA3P32297 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC3.69□□□□□ -1.82
CHRNA3P32297 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
CHRNA3P32297 AC109635.4-202ENST00000531666 412 ntBASIC3.69□□□□□ -1.82
CHRNA3P32297 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC3.69□□□□□ -1.82
CHRNA3P32297 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
CHRNA3P32297 AC020914.6-201ENST00000594327 272 ntBASIC3.69□□□□□ -1.82
CHRNA3P32297 AC011492.1-201ENST00000600023 315 ntBASIC3.69□□□□□ -1.82
CHRNA3P32297 AC068620.3-201ENST00000602749 560 ntBASIC3.69□□□□□ -1.82
CHRNA3P32297 AC103881.1-201ENST00000603476 538 ntBASIC3.69□□□□□ -1.82
CHRNA3P32297 AC024220.1-201ENST00000603675 484 ntBASIC3.69□□□□□ -1.82
CHRNA3P32297 LINC02098-202ENST00000609260 554 ntTSL 3 BASIC3.69□□□□□ -1.82
CHRNA3P32297 AL355816.2-201ENST00000610049 647 ntBASIC3.69□□□□□ -1.82
CHRNA3P32297 AL391261.4-201ENST00000616012 481 ntBASIC3.69□□□□□ -1.82
CHRNA3P32297 MESTIT1_2.1-201ENST00000616328 235 ntBASIC3.69□□□□□ -1.82
CHRNA3P32297 AP003476.1-201ENST00000623984 516 ntBASIC3.69□□□□□ -1.82
CHRNA3P32297 AC006963.1-201ENST00000624003 1052 ntBASIC3.69□□□□□ -1.82
CHRNA3P32297 CR381572.1-201ENST00000625098 102 ntBASIC3.69□□□□□ -1.82
CHRNA3P32297 MIR7153-201ENST00000637758 57 ntBASIC3.69□□□□□ -1.82
CHRNA3P32297 AL445984.1-201ENST00000637834 659 ntBASIC3.69□□□□□ -1.82
CHRNA3P32297 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.69□□□□□ -1.82
CHRNA3P32297 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
CHRNA3P32297 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
CHRNA3P32297 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
CHRNA3P32297 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.69□□□□□ -1.82
CHRNA3P32297 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.69□□□□□ -1.82
CHRNA3P32297 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
CHRNA3P32297 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
CHRNA3P32297 AC130650.2-201ENST00000618736 2403 ntBASIC3.69□□□□□ -1.82
CHRNA3P32297 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
CHRNA3P32297 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
CHRNA3P32297 AC007823.1-201ENST00000569932 1566 ntBASIC3.68□□□□□ -1.82
CHRNA3P32297 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.68□□□□□ -1.82
CHRNA3P32297 SNORD9-201ENST00000362566 104 ntBASIC3.68□□□□□ -1.82
CHRNA3P32297 RNU6-263P-201ENST00000363811 107 ntBASIC3.68□□□□□ -1.82
CHRNA3P32297 CRP-203ENST00000368111 512 ntTSL 3 BASIC3.68□□□□□ -1.82
CHRNA3P32297 RNU6-761P-201ENST00000384148 107 ntBASIC3.68□□□□□ -1.82
CHRNA3P32297 MIR7-3-201ENST00000384898 110 ntBASIC3.68□□□□□ -1.82
CHRNA3P32297 RNA5SP31-201ENST00000411144 127 ntBASIC3.68□□□□□ -1.82
CHRNA3P32297 BTBD9-AS1-201ENST00000412822 560 ntTSL 2 BASIC3.68□□□□□ -1.82
CHRNA3P32297 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.68□□□□□ -1.82
CHRNA3P32297 AC063965.1-201ENST00000416679 499 ntTSL 3 BASIC3.68□□□□□ -1.82
CHRNA3P32297 AC013262.1-201ENST00000426710 252 ntBASIC3.68□□□□□ -1.82
CHRNA3P32297 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
CHRNA3P32297 RPS24P6-201ENST00000452670 400 ntBASIC3.68□□□□□ -1.82
CHRNA3P32297 NDUFA5P7-201ENST00000452914 242 ntBASIC3.68□□□□□ -1.82
CHRNA3P32297 AC073387.1-201ENST00000453261 709 ntBASIC3.68□□□□□ -1.82
CHRNA3P32297 AC007967.1-201ENST00000455422 1159 ntBASIC3.68□□□□□ -1.82
CHRNA3P32297 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC3.68□□□□□ -1.82
CHRNA3P32297 RPL21P18-201ENST00000469899 480 ntBASIC3.68□□□□□ -1.82
CHRNA3P32297 RPS4XP22-201ENST00000480755 780 ntBASIC3.68□□□□□ -1.82
CHRNA3P32297 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC3.68□□□□□ -1.82
CHRNA3P32297 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC3.68□□□□□ -1.82
CHRNA3P32297 HMGB1P22-201ENST00000505315 124 ntBASIC3.68□□□□□ -1.82
CHRNA3P32297 NAMPTP2-201ENST00000505629 1115 ntBASIC3.68□□□□□ -1.82
CHRNA3P32297 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC3.68□□□□□ -1.82
CHRNA3P32297 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.68□□□□□ -1.82
CHRNA3P32297 SNORA70.19-201ENST00000516717 90 ntBASIC3.68□□□□□ -1.82
CHRNA3P32297 RNU6-1073P-201ENST00000517182 106 ntBASIC3.68□□□□□ -1.82
CHRNA3P32297 AP000790.1-201ENST00000528891 737 ntBASIC3.68□□□□□ -1.82
CHRNA3P32297 SMILR-201ENST00000533992 553 ntTSL 4 BASIC3.68□□□□□ -1.82
CHRNA3P32297 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
CHRNA3P32297 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC3.68□□□□□ -1.82
CHRNA3P32297 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC3.68□□□□□ -1.82
CHRNA3P32297 CCNG2P1-201ENST00000549521 1000 ntBASIC3.68□□□□□ -1.82
CHRNA3P32297 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC3.68□□□□□ -1.82
CHRNA3P32297 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC3.68□□□□□ -1.82
CHRNA3P32297 MTND1P8-201ENST00000571424 950 ntBASIC3.68□□□□□ -1.82
CHRNA3P32297 MIR4666A-201ENST00000580160 79 ntBASIC3.68□□□□□ -1.82
CHRNA3P32297 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
CHRNA3P32297 MIR3922-201ENST00000585192 84 ntBASIC3.68□□□□□ -1.82
CHRNA3P32297 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC3.68□□□□□ -1.82
CHRNA3P32297 AC096947.1-201ENST00000603233 470 ntBASIC3.68□□□□□ -1.82
CHRNA3P32297 U3.45-201ENST00000607547 219 ntBASIC3.68□□□□□ -1.82
CHRNA3P32297 AC034229.4-201ENST00000607861 441 ntBASIC3.68□□□□□ -1.82
CHRNA3P32297 AL590282.1-201ENST00000610379 1136 ntBASIC3.68□□□□□ -1.82
CHRNA3P32297 AC244100.1-202ENST00000621554 382 ntBASIC3.68□□□□□ -1.82
CHRNA3P32297 AP003355.3-201ENST00000623465 114 ntBASIC3.68□□□□□ -1.82
CHRNA3P32297 AP003485.1-201ENST00000625093 753 ntBASIC3.68□□□□□ -1.82
CHRNA3P32297 AC004808.1-201ENST00000627671 721 ntBASIC3.68□□□□□ -1.82
CHRNA3P32297 OFD1P5Y-201ENST00000447585 2590 ntBASIC3.68□□□□□ -1.82
CHRNA3P32297 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
CHRNA3P32297 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.68□□□□□ -1.82
CHRNA3P32297 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC3.68□□□□□ -1.82
CHRNA3P32297 AL645568.2-201ENST00000432815 1337 ntBASIC3.68□□□□□ -1.82
CHRNA3P32297 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.67□□□□□ -1.82
CHRNA3P32297 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
CHRNA3P32297 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
CHRNA3P32297 AP001148.1-201ENST00000624124 2359 ntBASIC3.67□□□□□ -1.82
CHRNA3P32297 TAS2R10-201ENST00000240619 1042 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
CHRNA3P32297 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 77.3 ms