Protein–RNA interactions for Protein: P29400

COL4A5, Collagen alpha-5(IV) chain, humanhuman

Predictions only

Length 1,685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5P29400 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC2.92□□□□□ -1.94
COL4A5P29400 AC107015.1-201ENST00000466902 747 ntBASIC2.92□□□□□ -1.94
COL4A5P29400 AP001086.1-201ENST00000494882 321 ntBASIC2.92□□□□□ -1.94
COL4A5P29400 CKS1BP2-201ENST00000497342 240 ntBASIC2.92□□□□□ -1.94
COL4A5P29400 MEPE-206ENST00000511670 550 ntTSL 4 BASIC2.92□□□□□ -1.94
COL4A5P29400 ACTR6P1-201ENST00000514311 1104 ntBASIC2.92□□□□□ -1.94
COL4A5P29400 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.92□□□□□ -1.94
COL4A5P29400 MTHFD2P4-201ENST00000515074 1025 ntBASIC2.92□□□□□ -1.94
COL4A5P29400 C5orf46-203ENST00000515291 573 ntAPPRIS ALT1 TSL 1 (best) BASIC2.92□□□□□ -1.94
COL4A5P29400 RANP3-201ENST00000530970 276 ntBASIC2.92□□□□□ -1.94
COL4A5P29400 AC021269.2-201ENST00000532318 330 ntBASIC2.92□□□□□ -1.94
COL4A5P29400 AC009318.2-201ENST00000610917 651 ntBASIC2.92□□□□□ -1.94
COL4A5P29400 Z99129.2-201ENST00000619967 314 ntBASIC2.92□□□□□ -1.94
COL4A5P29400 AP003499.2-201ENST00000624100 483 ntBASIC2.92□□□□□ -1.94
COL4A5P29400 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC2.91□□□□□ -1.94
COL4A5P29400 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
COL4A5P29400 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC2.91□□□□□ -1.94
COL4A5P29400 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC2.91□□□□□ -1.94
COL4A5P29400 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
COL4A5P29400 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC2.91□□□□□ -1.94
COL4A5P29400 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC2.91□□□□□ -1.94
COL4A5P29400 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC2.91□□□□□ -1.94
COL4A5P29400 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC2.91□□□□□ -1.94
COL4A5P29400 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC2.91□□□□□ -1.94
COL4A5P29400 RPS27AP18-201ENST00000515536 459 ntBASIC2.91□□□□□ -1.94
COL4A5P29400 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC2.91□□□□□ -1.94
COL4A5P29400 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC2.91□□□□□ -1.94
COL4A5P29400 MTND2P17-201ENST00000550281 688 ntBASIC2.91□□□□□ -1.94
COL4A5P29400 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC2.91□□□□□ -1.94
COL4A5P29400 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
COL4A5P29400 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC2.91□□□□□ -1.94
COL4A5P29400 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.9□□□□□ -1.94
COL4A5P29400 OR4G2P-202ENST00000641004 1759 ntBASIC2.9□□□□□ -1.94
COL4A5P29400 POPDC3-201ENST00000254765 1345 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
COL4A5P29400 KLRC2-201ENST00000381901 1211 ntAPPRIS ALT2 TSL 5 BASIC2.9□□□□□ -1.95
COL4A5P29400 RNU6-253P-201ENST00000384730 105 ntBASIC2.9□□□□□ -1.95
COL4A5P29400 AL450338.1-201ENST00000407987 512 ntBASIC2.9□□□□□ -1.95
COL4A5P29400 AC010881.1-201ENST00000433830 235 ntBASIC2.9□□□□□ -1.95
COL4A5P29400 AC018634.1-201ENST00000437554 401 ntBASIC2.9□□□□□ -1.95
COL4A5P29400 AL662791.1-201ENST00000441992 928 ntBASIC2.9□□□□□ -1.95
COL4A5P29400 TRBV1-201ENST00000476502 284 ntBASIC2.9□□□□□ -1.95
COL4A5P29400 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC2.9□□□□□ -1.95
COL4A5P29400 AC026436.1-201ENST00000510537 270 ntBASIC2.9□□□□□ -1.95
COL4A5P29400 RNU6-1231P-201ENST00000517185 103 ntBASIC2.9□□□□□ -1.95
COL4A5P29400 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC2.9□□□□□ -1.95
COL4A5P29400 AC022884.3-201ENST00000579571 248 ntBASIC2.9□□□□□ -1.95
COL4A5P29400 AL135786.2-201ENST00000608422 615 ntBASIC2.9□□□□□ -1.95
COL4A5P29400 KLRC2-206ENST00000619500 883 ntTSL 5 BASIC2.9□□□□□ -1.95
COL4A5P29400 MIR1291-201ENST00000627649 87 ntBASIC2.9□□□□□ -1.95
COL4A5P29400 FRG1DP-201ENST00000635586 771 ntBASIC2.9□□□□□ -1.95
COL4A5P29400 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
COL4A5P29400 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
COL4A5P29400 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
COL4A5P29400 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC2.89□□□□□ -1.95
COL4A5P29400 AL512430.2-201ENST00000406786 339 ntBASIC2.89□□□□□ -1.95
COL4A5P29400 AC013470.3-201ENST00000420252 1194 ntBASIC2.89□□□□□ -1.95
COL4A5P29400 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC2.89□□□□□ -1.95
COL4A5P29400 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC2.89□□□□□ -1.95
COL4A5P29400 RPL23AP74-201ENST00000437246 471 ntBASIC2.89□□□□□ -1.95
COL4A5P29400 AC124916.1-201ENST00000444020 547 ntBASIC2.89□□□□□ -1.95
COL4A5P29400 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC2.89□□□□□ -1.95
COL4A5P29400 NREP-207ENST00000450761 636 ntAPPRIS P1 TSL 4 BASIC2.89□□□□□ -1.95
COL4A5P29400 AP002371.1-201ENST00000463604 433 ntBASIC2.89□□□□□ -1.95
COL4A5P29400 LINC00632-202ENST00000498732 746 ntTSL 3 BASIC2.89□□□□□ -1.95
COL4A5P29400 AC111000.5-201ENST00000506559 1178 ntBASIC2.89□□□□□ -1.95
COL4A5P29400 AC023442.2-201ENST00000526455 270 ntTSL 3 BASIC2.89□□□□□ -1.95
COL4A5P29400 AC123904.3-201ENST00000547218 814 ntBASIC2.89□□□□□ -1.95
COL4A5P29400 AC105094.2-202ENST00000590968 566 ntTSL 2 BASIC2.89□□□□□ -1.95
COL4A5P29400 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC2.89□□□□□ -1.95
COL4A5P29400 AL136981.2-201ENST00000617319 734 ntBASIC2.89□□□□□ -1.95
COL4A5P29400 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
COL4A5P29400 AC092881.1-201ENST00000638218 2733 ntBASIC2.89□□□□□ -1.95
COL4A5P29400 AC009487.2-201ENST00000420969 6821 ntBASIC2.89□□□□□ -1.95
COL4A5P29400 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC2.89□□□□□ -1.95
COL4A5P29400 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
COL4A5P29400 RNA5SP456-201ENST00000364002 114 ntBASIC2.88□□□□□ -1.95
COL4A5P29400 RNU1-100P-201ENST00000365255 165 ntBASIC2.88□□□□□ -1.95
COL4A5P29400 SNORA64-201ENST00000384674 134 ntBASIC2.88□□□□□ -1.95
COL4A5P29400 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.88□□□□□ -1.95
COL4A5P29400 AL009174.1-201ENST00000426577 416 ntBASIC2.88□□□□□ -1.95
COL4A5P29400 AC000111.1-201ENST00000441019 221 ntTSL 3 BASIC2.88□□□□□ -1.95
COL4A5P29400 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC2.88□□□□□ -1.95
COL4A5P29400 AL354710.1-201ENST00000453641 246 ntBASIC2.88□□□□□ -1.95
COL4A5P29400 HMGB1P15-201ENST00000453854 435 ntBASIC2.88□□□□□ -1.95
COL4A5P29400 TRBV8-1-201ENST00000481590 279 ntBASIC2.88□□□□□ -1.95
COL4A5P29400 AC103975.1-201ENST00000482506 483 ntBASIC2.88□□□□□ -1.95
COL4A5P29400 RPL23AP49-201ENST00000492925 468 ntBASIC2.88□□□□□ -1.95
COL4A5P29400 SUCLG2-AS1-203ENST00000496640 862 ntTSL 5 BASIC2.88□□□□□ -1.95
COL4A5P29400 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC2.88□□□□□ -1.95
COL4A5P29400 AC025423.2-201ENST00000537570 439 ntBASIC2.88□□□□□ -1.95
COL4A5P29400 AC018630.1-201ENST00000541376 925 ntBASIC2.88□□□□□ -1.95
COL4A5P29400 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC2.88□□□□□ -1.95
COL4A5P29400 AC061975.8-201ENST00000587058 721 ntBASIC2.88□□□□□ -1.95
COL4A5P29400 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
COL4A5P29400 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.88□□□□□ -1.95
COL4A5P29400 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
COL4A5P29400 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
COL4A5P29400 RN7SKP140-201ENST00000411196 284 ntBASIC2.88□□□□□ -1.95
COL4A5P29400 MAGI2-AS1-201ENST00000428298 472 ntTSL 3 BASIC2.88□□□□□ -1.95
COL4A5P29400 Z98742.2-201ENST00000431564 187 ntBASIC2.88□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 94.7 ms