Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 PGBD4-201ENST00000397766 6612 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
VARSP26640 FAT4-202ENST00000394329 16123 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
VARSP26640 FBXW12-201ENST00000296438 1647 ntAPPRIS P3 TSL 1 (best) BASIC6.19□□□□□ -1.42
VARSP26640 XIAPP3-201ENST00000312918 795 ntBASIC6.19□□□□□ -1.42
VARSP26640 SNORD113-1-201ENST00000365321 69 ntBASIC6.19□□□□□ -1.42
VARSP26640 RNU6-1226P-201ENST00000384317 107 ntBASIC6.19□□□□□ -1.42
VARSP26640 Y_RNA.577-201ENST00000384794 101 ntBASIC6.19□□□□□ -1.42
VARSP26640 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC6.19□□□□□ -1.42
VARSP26640 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC6.19□□□□□ -1.42
VARSP26640 AL390243.1-201ENST00000422038 708 ntTSL 2 BASIC6.19□□□□□ -1.42
VARSP26640 ATP5A1P8-201ENST00000423669 1291 ntBASIC6.19□□□□□ -1.42
VARSP26640 AC004383.1-201ENST00000438135 289 ntBASIC6.19□□□□□ -1.42
VARSP26640 RPL36AP13-201ENST00000457490 317 ntBASIC6.19□□□□□ -1.42
VARSP26640 AC104339.1-201ENST00000465478 348 ntBASIC6.19□□□□□ -1.42
VARSP26640 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC6.19□□□□□ -1.42
VARSP26640 AP001086.1-201ENST00000494882 321 ntBASIC6.19□□□□□ -1.42
VARSP26640 CBX1-205ENST00000495350 550 ntTSL 2 BASIC6.19□□□□□ -1.42
VARSP26640 AC018645.1-201ENST00000505003 109 ntBASIC6.19□□□□□ -1.42
VARSP26640 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC6.19□□□□□ -1.42
VARSP26640 AC105384.2-201ENST00000508433 640 ntBASIC6.19□□□□□ -1.42
VARSP26640 AC018797.1-201ENST00000510791 255 ntBASIC6.19□□□□□ -1.42
VARSP26640 WBP1LP3-201ENST00000523033 208 ntBASIC6.19□□□□□ -1.42
VARSP26640 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC6.19□□□□□ -1.42
VARSP26640 AL133399.1-201ENST00000527476 298 ntBASIC6.19□□□□□ -1.42
VARSP26640 SARNP-203ENST00000552080 726 ntTSL 2 BASIC6.19□□□□□ -1.42
VARSP26640 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
VARSP26640 RPL23AP84-201ENST00000571193 464 ntBASIC6.19□□□□□ -1.42
VARSP26640 RN7SL475P-201ENST00000583379 298 ntBASIC6.19□□□□□ -1.42
VARSP26640 PSMA6P4-201ENST00000603247 718 ntBASIC6.19□□□□□ -1.42
VARSP26640 AL451044.1-201ENST00000604867 238 ntBASIC6.19□□□□□ -1.42
VARSP26640 LY86-AS1-206ENST00000607278 677 ntTSL 3 BASIC6.19□□□□□ -1.42
VARSP26640 NLGN1-202ENST00000401917 1827 ntTSL 5 BASIC6.19□□□□□ -1.42
VARSP26640 DCAF8L1-201ENST00000441525 3457 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
VARSP26640 ZNF578-201ENST00000421239 2017 ntAPPRIS P1 TSL 2 BASIC6.19□□□□□ -1.42
VARSP26640 CLRN1-AS1-201ENST00000465576 2045 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
VARSP26640 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC6.19□□□□□ -1.42
VARSP26640 NCOA7-201ENST00000229634 2998 ntAPPRIS ALT2 TSL 2 BASIC6.19□□□□□ -1.42
VARSP26640 ATP2C1-203ENST00000422190 3386 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
VARSP26640 POT1-202ENST00000393329 3950 ntTSL 5 BASIC6.19□□□□□ -1.42
VARSP26640 PCYT1A-204ENST00000419333 1325 ntTSL 5 BASIC6.19□□□□□ -1.42
VARSP26640 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC6.19□□□□□ -1.42
VARSP26640 NDST4-204ENST00000613194 3439 ntTSL 5 BASIC6.19□□□□□ -1.42
VARSP26640 AL445437.1-201ENST00000623157 3087 ntBASIC6.19□□□□□ -1.42
VARSP26640 GNRHR-201ENST00000226413 2164 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
VARSP26640 ROR1-AS1-202ENST00000424995 2189 ntTSL 2 BASIC6.18□□□□□ -1.42
VARSP26640 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC6.18□□□□□ -1.42
VARSP26640 FBXO9-201ENST00000244426 4559 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
VARSP26640 USP37-205ENST00000454775 5019 ntAPPRIS P1 TSL 2 BASIC6.18□□□□□ -1.42
VARSP26640 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC6.18□□□□□ -1.42
VARSP26640 AC005162.3-201ENST00000609389 3695 ntTSL 5 BASIC6.18□□□□□ -1.42
VARSP26640 AC010266.2-201ENST00000564741 3255 ntBASIC6.18□□□□□ -1.42
VARSP26640 SSH2-204ENST00000540801 4538 ntAPPRIS ALT2 TSL 2 BASIC6.18□□□□□ -1.42
VARSP26640 PYGO1-202ENST00000563719 2653 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
VARSP26640 MSL2-202ENST00000434835 2272 ntTSL 2 BASIC6.18□□□□□ -1.42
VARSP26640 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
VARSP26640 DCN-218ENST00000551354 2924 ntTSL 3 BASIC6.18□□□□□ -1.42
VARSP26640 ERC1-222ENST00000589028 9202 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
VARSP26640 PTPN3-202ENST00000374541 6703 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
VARSP26640 PRRC1-201ENST00000296666 4699 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
VARSP26640 Y_RNA.65-201ENST00000362846 100 ntBASIC6.18□□□□□ -1.42
VARSP26640 Y_RNA.526-201ENST00000384572 110 ntBASIC6.18□□□□□ -1.42
VARSP26640 MRPS21P5-201ENST00000417885 231 ntBASIC6.18□□□□□ -1.42
VARSP26640 RPL7P2-201ENST00000427639 268 ntBASIC6.18□□□□□ -1.42
VARSP26640 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC6.18□□□□□ -1.42
VARSP26640 AL353997.1-201ENST00000432936 108 ntBASIC6.18□□□□□ -1.42
VARSP26640 AL445928.1-201ENST00000435545 222 ntBASIC6.18□□□□□ -1.42
VARSP26640 AC005094.1-201ENST00000440420 368 ntBASIC6.18□□□□□ -1.42
VARSP26640 EIF5AP4-201ENST00000441206 465 ntBASIC6.18□□□□□ -1.42
VARSP26640 POU5F1P5-201ENST00000445059 658 ntBASIC6.18□□□□□ -1.42
VARSP26640 AL138752.1-201ENST00000452964 351 ntBASIC6.18□□□□□ -1.42
VARSP26640 LINC01399-202ENST00000458450 244 ntBASIC6.18□□□□□ -1.42
VARSP26640 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
VARSP26640 AC094085.1-201ENST00000468914 584 ntBASIC6.18□□□□□ -1.42
VARSP26640 AC084198.1-201ENST00000477747 402 ntBASIC6.18□□□□□ -1.42
VARSP26640 UBA52P7-201ENST00000486088 380 ntBASIC6.18□□□□□ -1.42
VARSP26640 LINC02025-201ENST00000488348 360 ntTSL 3 BASIC6.18□□□□□ -1.42
VARSP26640 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
VARSP26640 AC093599.1-201ENST00000515232 562 ntTSL 4 BASIC6.18□□□□□ -1.42
VARSP26640 SNORA70.11-201ENST00000515987 138 ntBASIC6.18□□□□□ -1.42
VARSP26640 SNORA70.13-201ENST00000516116 138 ntBASIC6.18□□□□□ -1.42
VARSP26640 IGHV7-34-1-201ENST00000519200 350 ntBASIC6.18□□□□□ -1.42
VARSP26640 AC008663.1-201ENST00000519821 455 ntTSL 4 BASIC6.18□□□□□ -1.42
VARSP26640 AP001922.4-201ENST00000526967 290 ntBASIC6.18□□□□□ -1.42
VARSP26640 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC6.18□□□□□ -1.42
VARSP26640 CYCSP27-201ENST00000527643 293 ntBASIC6.18□□□□□ -1.42
VARSP26640 AC005363.1-201ENST00000530779 351 ntBASIC6.18□□□□□ -1.42
VARSP26640 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC6.18□□□□□ -1.42
VARSP26640 TPRX1P1-201ENST00000557620 319 ntBASIC6.18□□□□□ -1.42
VARSP26640 AC005544.1-201ENST00000584277 460 ntTSL 3 BASIC6.18□□□□□ -1.42
VARSP26640 AL355816.1-201ENST00000607951 118 ntBASIC6.18□□□□□ -1.42
VARSP26640 uc_338.31-201ENST00000615595 186 ntBASIC6.18□□□□□ -1.42
VARSP26640 AL118522.2-201ENST00000616045 615 ntBASIC6.18□□□□□ -1.42
VARSP26640 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
VARSP26640 NAPEPLD-203ENST00000417955 4988 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
VARSP26640 EXOC5P1-201ENST00000510543 1969 ntBASIC6.18□□□□□ -1.42
VARSP26640 PRKDC-202ENST00000338368 12784 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
VARSP26640 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC6.18□□□□□ -1.42
VARSP26640 TBC1D23-202ENST00000394144 3677 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
VARSP26640 WDR64-201ENST00000366552 4371 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
VARSP26640 ZNF724-201ENST00000418100 2764 ntAPPRIS P1 TSL 2 BASIC6.18□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 95.3 ms