Protein–RNA interactions for Protein: P20700

LMNB1, Lamin-B1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1P20700 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC5.91□□□□□ -1.46
LMNB1P20700 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC5.91□□□□□ -1.46
LMNB1P20700 AC123904.2-201ENST00000548059 300 ntBASIC5.91□□□□□ -1.46
LMNB1P20700 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC5.91□□□□□ -1.46
LMNB1P20700 HIF1AP1-201ENST00000553642 175 ntBASIC5.91□□□□□ -1.46
LMNB1P20700 AL359212.1-201ENST00000556608 614 ntBASIC5.91□□□□□ -1.46
LMNB1P20700 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC5.91□□□□□ -1.46
LMNB1P20700 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC5.91□□□□□ -1.46
LMNB1P20700 AC006363.1-201ENST00000603806 463 ntBASIC5.91□□□□□ -1.46
LMNB1P20700 AC010424.2-201ENST00000607594 443 ntBASIC5.91□□□□□ -1.46
LMNB1P20700 AL391813.2-201ENST00000609113 322 ntBASIC5.91□□□□□ -1.46
LMNB1P20700 AL161734.1-201ENST00000609720 557 ntBASIC5.91□□□□□ -1.46
LMNB1P20700 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC5.91□□□□□ -1.46
LMNB1P20700 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC5.91□□□□□ -1.46
LMNB1P20700 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
LMNB1P20700 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
LMNB1P20700 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
LMNB1P20700 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
LMNB1P20700 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC5.91□□□□□ -1.46
LMNB1P20700 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC5.91□□□□□ -1.46
LMNB1P20700 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC5.91□□□□□ -1.46
LMNB1P20700 RAD17P1-201ENST00000418130 2042 ntBASIC5.91□□□□□ -1.46
LMNB1P20700 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
LMNB1P20700 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
LMNB1P20700 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
LMNB1P20700 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
LMNB1P20700 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC5.9□□□□□ -1.46
LMNB1P20700 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC5.9□□□□□ -1.46
LMNB1P20700 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC5.9□□□□□ -1.46
LMNB1P20700 RMST-209ENST00000639542 3269 ntTSL 5 BASIC5.9□□□□□ -1.46
LMNB1P20700 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
LMNB1P20700 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC5.9□□□□□ -1.46
LMNB1P20700 AL049780.3-201ENST00000624612 1583 ntBASIC5.9□□□□□ -1.46
LMNB1P20700 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC5.9□□□□□ -1.46
LMNB1P20700 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC5.9□□□□□ -1.46
LMNB1P20700 OR52B1P-201ENST00000316506 909 ntBASIC5.9□□□□□ -1.46
LMNB1P20700 SNORD56.2-201ENST00000363242 71 ntBASIC5.9□□□□□ -1.46
LMNB1P20700 AL031679.1-201ENST00000400616 525 ntBASIC5.9□□□□□ -1.46
LMNB1P20700 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC5.9□□□□□ -1.46
LMNB1P20700 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC5.9□□□□□ -1.46
LMNB1P20700 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC5.9□□□□□ -1.46
LMNB1P20700 GTF2IP20-201ENST00000431663 360 ntBASIC5.9□□□□□ -1.46
LMNB1P20700 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
LMNB1P20700 FHP1-201ENST00000442741 703 ntBASIC5.9□□□□□ -1.46
LMNB1P20700 RPL23AP20-201ENST00000447965 421 ntBASIC5.9□□□□□ -1.46
LMNB1P20700 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC5.9□□□□□ -1.46
LMNB1P20700 RPL39P36-201ENST00000490784 156 ntBASIC5.9□□□□□ -1.46
LMNB1P20700 RN7SL441P-201ENST00000492388 296 ntBASIC5.9□□□□□ -1.46
LMNB1P20700 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
LMNB1P20700 LRRC34P2-201ENST00000514850 553 ntBASIC5.9□□□□□ -1.46
LMNB1P20700 RNU6-1153P-201ENST00000516760 105 ntBASIC5.9□□□□□ -1.46
LMNB1P20700 RNU6-201P-201ENST00000517100 61 ntBASIC5.9□□□□□ -1.46
LMNB1P20700 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC5.9□□□□□ -1.46
LMNB1P20700 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC5.9□□□□□ -1.46
LMNB1P20700 HSPA8P13-201ENST00000523715 472 ntBASIC5.9□□□□□ -1.46
LMNB1P20700 AP001781.1-201ENST00000530977 207 ntBASIC5.9□□□□□ -1.46
LMNB1P20700 SUB1P2-201ENST00000556401 297 ntBASIC5.9□□□□□ -1.46
LMNB1P20700 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC5.9□□□□□ -1.46
LMNB1P20700 RMST_3.1-201ENST00000611651 109 ntBASIC5.9□□□□□ -1.46
LMNB1P20700 AP006248.2-201ENST00000623309 592 ntBASIC5.9□□□□□ -1.46
LMNB1P20700 FER-210ENST00000628534 558 ntTSL 5 BASIC5.9□□□□□ -1.46
LMNB1P20700 SRP54-214ENST00000630962 162 ntTSL 5 BASIC5.9□□□□□ -1.46
LMNB1P20700 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
LMNB1P20700 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
LMNB1P20700 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC5.9□□□□□ -1.47
LMNB1P20700 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.47
LMNB1P20700 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC5.89□□□□□ -1.47
LMNB1P20700 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC5.89□□□□□ -1.47
LMNB1P20700 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
LMNB1P20700 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC5.89□□□□□ -1.47
LMNB1P20700 CARF-208ENST00000428585 2513 ntTSL 2 BASIC5.89□□□□□ -1.47
LMNB1P20700 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC5.89□□□□□ -1.47
LMNB1P20700 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
LMNB1P20700 NAP1L4P1-201ENST00000319092 1157 ntBASIC5.89□□□□□ -1.47
LMNB1P20700 RNU5E-1-201ENST00000362477 120 ntBASIC5.89□□□□□ -1.47
LMNB1P20700 Y_RNA.529-201ENST00000384586 119 ntBASIC5.89□□□□□ -1.47
LMNB1P20700 AC127391.1-201ENST00000411737 98 ntBASIC5.89□□□□□ -1.47
LMNB1P20700 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC5.89□□□□□ -1.47
LMNB1P20700 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC5.89□□□□□ -1.47
LMNB1P20700 RPL7P54-201ENST00000438336 674 ntBASIC5.89□□□□□ -1.47
LMNB1P20700 AC004980.3-201ENST00000447046 365 ntBASIC5.89□□□□□ -1.47
LMNB1P20700 NUTF2P3-201ENST00000448540 384 ntBASIC5.89□□□□□ -1.47
LMNB1P20700 FDX1P2-201ENST00000450769 375 ntBASIC5.89□□□□□ -1.47
LMNB1P20700 RN7SL303P-201ENST00000469773 251 ntBASIC5.89□□□□□ -1.47
LMNB1P20700 AP002812.1-201ENST00000495378 474 ntBASIC5.89□□□□□ -1.47
LMNB1P20700 PANCR-202ENST00000513690 448 ntTSL 2 BASIC5.89□□□□□ -1.47
LMNB1P20700 snoU109.6-201ENST00000516831 118 ntBASIC5.89□□□□□ -1.47
LMNB1P20700 RNU6-714P-201ENST00000516963 103 ntBASIC5.89□□□□□ -1.47
LMNB1P20700 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC5.89□□□□□ -1.47
LMNB1P20700 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC5.89□□□□□ -1.47
LMNB1P20700 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC5.89□□□□□ -1.47
LMNB1P20700 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC5.89□□□□□ -1.47
LMNB1P20700 AC127024.5-201ENST00000580085 462 ntBASIC5.89□□□□□ -1.47
LMNB1P20700 AC007621.1-201ENST00000604544 437 ntBASIC5.89□□□□□ -1.47
LMNB1P20700 ARF4P1-201ENST00000605447 541 ntBASIC5.89□□□□□ -1.47
LMNB1P20700 AL133173.2-201ENST00000614270 90 ntBASIC5.89□□□□□ -1.47
LMNB1P20700 AC114781.5-201ENST00000615297 108 ntBASIC5.89□□□□□ -1.47
LMNB1P20700 AL049794.2-201ENST00000616301 365 ntBASIC5.89□□□□□ -1.47
LMNB1P20700 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
LMNB1P20700 AC009159.1-201ENST00000618386 642 ntBASIC5.89□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 10.6 ms