Protein–RNA interactions for Protein: P18858

LIG1, DNA ligase 1, humanhuman

Predictions only

Length 919 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1P18858 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC5.86□□□□□ -1.47
LIG1P18858 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC5.86□□□□□ -1.47
LIG1P18858 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC5.86□□□□□ -1.47
LIG1P18858 AC007151.1-201ENST00000572774 483 ntBASIC5.86□□□□□ -1.47
LIG1P18858 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC5.86□□□□□ -1.47
LIG1P18858 SNORD39.3-201ENST00000584451 71 ntBASIC5.86□□□□□ -1.47
LIG1P18858 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC5.86□□□□□ -1.47
LIG1P18858 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC5.86□□□□□ -1.47
LIG1P18858 Z98949.1-202ENST00000600211 1282 ntTSL 5 BASIC5.86□□□□□ -1.47
LIG1P18858 AC116312.1-201ENST00000606841 314 ntBASIC5.86□□□□□ -1.47
LIG1P18858 Z98200.1-201ENST00000607298 470 ntBASIC5.86□□□□□ -1.47
LIG1P18858 AC126915.2-201ENST00000610957 190 ntBASIC5.86□□□□□ -1.47
LIG1P18858 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
LIG1P18858 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC5.86□□□□□ -1.47
LIG1P18858 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC5.86□□□□□ -1.47
LIG1P18858 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC5.86□□□□□ -1.47
LIG1P18858 HSPA8P18-201ENST00000439846 1928 ntBASIC5.86□□□□□ -1.47
LIG1P18858 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
LIG1P18858 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC5.85□□□□□ -1.47
LIG1P18858 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC5.85□□□□□ -1.47
LIG1P18858 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
LIG1P18858 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC5.85□□□□□ -1.47
LIG1P18858 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
LIG1P18858 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC5.85□□□□□ -1.47
LIG1P18858 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
LIG1P18858 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC5.85□□□□□ -1.47
LIG1P18858 AC091046.3-201ENST00000631455 1574 ntBASIC5.85□□□□□ -1.47
LIG1P18858 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC5.85□□□□□ -1.47
LIG1P18858 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
LIG1P18858 MTND4P27-201ENST00000450813 1354 ntBASIC5.85□□□□□ -1.47
LIG1P18858 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC5.85□□□□□ -1.47
LIG1P18858 AC109780.1-201ENST00000451768 1344 ntBASIC5.85□□□□□ -1.47
LIG1P18858 RNU6-223P-201ENST00000362830 107 ntBASIC5.85□□□□□ -1.47
LIG1P18858 U3.2-201ENST00000362981 210 ntBASIC5.85□□□□□ -1.47
LIG1P18858 IARS-201ENST00000375627 697 ntTSL 3 BASIC5.85□□□□□ -1.47
LIG1P18858 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
LIG1P18858 RNU6-444P-201ENST00000383988 108 ntBASIC5.85□□□□□ -1.47
LIG1P18858 RNU6-510P-201ENST00000391239 108 ntBASIC5.85□□□□□ -1.47
LIG1P18858 DHFRP6-201ENST00000401776 268 ntBASIC5.85□□□□□ -1.47
LIG1P18858 DPPA2P3-201ENST00000411853 655 ntBASIC5.85□□□□□ -1.47
LIG1P18858 AC234782.4-201ENST00000417646 1048 ntBASIC5.85□□□□□ -1.47
LIG1P18858 AC008280.1-201ENST00000418851 412 ntBASIC5.85□□□□□ -1.47
LIG1P18858 RBM6-203ENST00000421682 684 ntTSL 2 BASIC5.85□□□□□ -1.47
LIG1P18858 OR2AH1P-201ENST00000425717 928 ntBASIC5.85□□□□□ -1.47
LIG1P18858 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC5.85□□□□□ -1.47
LIG1P18858 AL161722.2-201ENST00000434731 981 ntBASIC5.85□□□□□ -1.47
LIG1P18858 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC5.85□□□□□ -1.47
LIG1P18858 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
LIG1P18858 RNA5SP103-201ENST00000459503 118 ntBASIC5.85□□□□□ -1.47
LIG1P18858 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC5.85□□□□□ -1.47
LIG1P18858 RPS21P4-201ENST00000487122 248 ntBASIC5.85□□□□□ -1.47
LIG1P18858 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC5.85□□□□□ -1.47
LIG1P18858 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC5.85□□□□□ -1.47
LIG1P18858 RNU6-714P-201ENST00000516963 103 ntBASIC5.85□□□□□ -1.47
LIG1P18858 AC027308.1-201ENST00000517993 110 ntBASIC5.85□□□□□ -1.47
LIG1P18858 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC5.85□□□□□ -1.47
LIG1P18858 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC5.85□□□□□ -1.47
LIG1P18858 AC087241.2-201ENST00000535801 324 ntBASIC5.85□□□□□ -1.47
LIG1P18858 AC023050.3-201ENST00000541142 333 ntBASIC5.85□□□□□ -1.47
LIG1P18858 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC5.85□□□□□ -1.47
LIG1P18858 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC5.85□□□□□ -1.47
LIG1P18858 AC020661.2-201ENST00000560114 134 ntBASIC5.85□□□□□ -1.47
LIG1P18858 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
LIG1P18858 MAGOH2P-202ENST00000584384 429 ntBASIC5.85□□□□□ -1.47
LIG1P18858 RPL26P30-202ENST00000602923 645 ntBASIC5.85□□□□□ -1.47
LIG1P18858 AC115621.1-201ENST00000604653 858 ntBASIC5.85□□□□□ -1.47
LIG1P18858 AC015914.2-201ENST00000618167 288 ntBASIC5.85□□□□□ -1.47
LIG1P18858 AC233309.1-201ENST00000619522 751 ntBASIC5.85□□□□□ -1.47
LIG1P18858 MIR6719-201ENST00000622428 87 ntBASIC5.85□□□□□ -1.47
LIG1P18858 C2orf27A-204ENST00000623058 969 ntBASIC5.85□□□□□ -1.47
LIG1P18858 CCT5-215ENST00000625723 135 ntTSL 5 BASIC5.85□□□□□ -1.47
LIG1P18858 U6.101-201ENST00000637707 76 ntBASIC5.85□□□□□ -1.47
LIG1P18858 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
LIG1P18858 Z95327.2-201ENST00000414579 1873 ntBASIC5.85□□□□□ -1.47
LIG1P18858 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
LIG1P18858 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC5.85□□□□□ -1.47
LIG1P18858 AC090229.1-201ENST00000590983 1609 ntBASIC5.85□□□□□ -1.47
LIG1P18858 AL049780.3-201ENST00000624612 1583 ntBASIC5.84□□□□□ -1.47
LIG1P18858 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
LIG1P18858 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.47
LIG1P18858 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
LIG1P18858 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC5.84□□□□□ -1.47
LIG1P18858 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
LIG1P18858 FTX-210ENST00000603037 8347 ntTSL 5 BASIC5.84□□□□□ -1.47
LIG1P18858 RNA5SP183-201ENST00000362452 119 ntBASIC5.84□□□□□ -1.47
LIG1P18858 RNU6-984P-201ENST00000363236 109 ntBASIC5.84□□□□□ -1.47
LIG1P18858 RNU4-1-201ENST00000363925 141 ntBASIC5.84□□□□□ -1.47
LIG1P18858 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
LIG1P18858 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
LIG1P18858 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
LIG1P18858 DUTP5-201ENST00000406790 469 ntBASIC5.84□□□□□ -1.47
LIG1P18858 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC5.84□□□□□ -1.47
LIG1P18858 AC004987.3-201ENST00000413879 771 ntBASIC5.84□□□□□ -1.47
LIG1P18858 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC5.84□□□□□ -1.47
LIG1P18858 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC5.84□□□□□ -1.47
LIG1P18858 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
LIG1P18858 AC007556.1-201ENST00000432133 307 ntTSL 2 BASIC5.84□□□□□ -1.47
LIG1P18858 RPL34P6-201ENST00000432390 345 ntBASIC5.84□□□□□ -1.47
LIG1P18858 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC5.84□□□□□ -1.47
LIG1P18858 RPL36AP15-201ENST00000444514 266 ntBASIC5.84□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 92.6 ms