Protein–RNA interactions for Protein: P18074

ERCC2, TFIIH basal transcription factor complex helicase XPD subunit, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2P18074 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
ERCC2P18074 PTER-201ENST00000298942 3448 ntTSL 5 BASIC3.84□□□□□ -1.8
ERCC2P18074 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
ERCC2P18074 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
ERCC2P18074 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
ERCC2P18074 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
ERCC2P18074 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
ERCC2P18074 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC3.83□□□□□ -1.8
ERCC2P18074 AC010733.2-201ENST00000589496 5702 ntBASIC3.83□□□□□ -1.8
ERCC2P18074 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
ERCC2P18074 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC3.83□□□□□ -1.8
ERCC2P18074 Y_RNA.192-201ENST00000363977 102 ntBASIC3.83□□□□□ -1.8
ERCC2P18074 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
ERCC2P18074 Y_RNA.465-201ENST00000384293 102 ntBASIC3.83□□□□□ -1.8
ERCC2P18074 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC3.83□□□□□ -1.8
ERCC2P18074 RNU2-15P-201ENST00000410692 191 ntBASIC3.83□□□□□ -1.8
ERCC2P18074 USP9YP11-201ENST00000427537 717 ntBASIC3.83□□□□□ -1.8
ERCC2P18074 PSMA6P3-201ENST00000428242 164 ntBASIC3.83□□□□□ -1.8
ERCC2P18074 ATP5F1P1-201ENST00000433775 569 ntBASIC3.83□□□□□ -1.8
ERCC2P18074 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC3.83□□□□□ -1.8
ERCC2P18074 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC3.83□□□□□ -1.8
ERCC2P18074 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC3.83□□□□□ -1.8
ERCC2P18074 AL606517.1-201ENST00000446914 387 ntBASIC3.83□□□□□ -1.8
ERCC2P18074 PTENP1-201ENST00000447117 1215 ntBASIC3.83□□□□□ -1.8
ERCC2P18074 AC026410.2-201ENST00000460281 156 ntBASIC3.83□□□□□ -1.8
ERCC2P18074 RPL9P32-201ENST00000464118 620 ntBASIC3.83□□□□□ -1.8
ERCC2P18074 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
ERCC2P18074 AC010285.1-201ENST00000470580 392 ntBASIC3.83□□□□□ -1.8
ERCC2P18074 MTCO3P35-201ENST00000485582 781 ntBASIC3.83□□□□□ -1.8
ERCC2P18074 AC146944.2-203ENST00000502493 354 ntBASIC3.83□□□□□ -1.8
ERCC2P18074 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
ERCC2P18074 AC139495.1-202ENST00000513164 354 ntBASIC3.83□□□□□ -1.8
ERCC2P18074 RN7SKP244-201ENST00000516513 307 ntBASIC3.83□□□□□ -1.8
ERCC2P18074 SNORA31.20-201ENST00000517111 133 ntBASIC3.83□□□□□ -1.8
ERCC2P18074 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC3.83□□□□□ -1.8
ERCC2P18074 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC3.83□□□□□ -1.8
ERCC2P18074 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC3.83□□□□□ -1.8
ERCC2P18074 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC3.83□□□□□ -1.8
ERCC2P18074 AC008011.1-201ENST00000545989 227 ntBASIC3.83□□□□□ -1.8
ERCC2P18074 EEF1B2P4-201ENST00000551398 348 ntBASIC3.83□□□□□ -1.8
ERCC2P18074 AL121603.1-201ENST00000553815 142 ntBASIC3.83□□□□□ -1.8
ERCC2P18074 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC3.83□□□□□ -1.8
ERCC2P18074 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC3.83□□□□□ -1.8
ERCC2P18074 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC3.83□□□□□ -1.8
ERCC2P18074 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC3.83□□□□□ -1.8
ERCC2P18074 MIR4637-201ENST00000582405 84 ntBASIC3.83□□□□□ -1.8
ERCC2P18074 MIR5187-201ENST00000583479 76 ntBASIC3.83□□□□□ -1.8
ERCC2P18074 MAGOH2P-202ENST00000584384 429 ntBASIC3.83□□□□□ -1.8
ERCC2P18074 CCDC58P3-201ENST00000590792 430 ntBASIC3.83□□□□□ -1.8
ERCC2P18074 AL163642.2-201ENST00000604722 1019 ntBASIC3.83□□□□□ -1.8
ERCC2P18074 AL451086.1-201ENST00000605596 223 ntBASIC3.83□□□□□ -1.8
ERCC2P18074 MIR4278-201ENST00000636094 69 ntBASIC3.83□□□□□ -1.8
ERCC2P18074 GABPAP-201ENST00000419271 1356 ntBASIC3.83□□□□□ -1.8
ERCC2P18074 AP002907.1-201ENST00000606361 1430 ntBASIC3.83□□□□□ -1.8
ERCC2P18074 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
ERCC2P18074 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC3.83□□□□□ -1.8
ERCC2P18074 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
ERCC2P18074 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
ERCC2P18074 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
ERCC2P18074 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC3.82□□□□□ -1.8
ERCC2P18074 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
ERCC2P18074 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC3.82□□□□□ -1.8
ERCC2P18074 AC244517.1-201ENST00000606030 2086 ntBASIC3.82□□□□□ -1.8
ERCC2P18074 AP001350.1-201ENST00000601906 1524 ntBASIC3.82□□□□□ -1.8
ERCC2P18074 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
ERCC2P18074 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC3.82□□□□□ -1.8
ERCC2P18074 RNU1-18P-201ENST00000363062 164 ntBASIC3.82□□□□□ -1.8
ERCC2P18074 CGA-201ENST00000369582 729 ntTSL 5 BASIC3.82□□□□□ -1.8
ERCC2P18074 RNU6-1122P-201ENST00000384449 107 ntBASIC3.82□□□□□ -1.8
ERCC2P18074 RNU6-878P-201ENST00000384578 110 ntBASIC3.82□□□□□ -1.8
ERCC2P18074 RPL7P60-201ENST00000397636 735 ntBASIC3.82□□□□□ -1.8
ERCC2P18074 AC092447.6-201ENST00000414578 210 ntBASIC3.82□□□□□ -1.8
ERCC2P18074 RAD23BP2-201ENST00000416003 1207 ntBASIC3.82□□□□□ -1.8
ERCC2P18074 NDUFB1P1-201ENST00000435191 180 ntBASIC3.82□□□□□ -1.8
ERCC2P18074 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC3.82□□□□□ -1.8
ERCC2P18074 RPL23AP74-201ENST00000437246 471 ntBASIC3.82□□□□□ -1.8
ERCC2P18074 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
ERCC2P18074 OFD1P3Y-201ENST00000453312 783 ntBASIC3.82□□□□□ -1.8
ERCC2P18074 NANOGP10-201ENST00000453325 895 ntBASIC3.82□□□□□ -1.8
ERCC2P18074 RPL18AP17-201ENST00000455326 198 ntBASIC3.82□□□□□ -1.8
ERCC2P18074 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC3.82□□□□□ -1.8
ERCC2P18074 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC3.82□□□□□ -1.8
ERCC2P18074 ANK3-207ENST00000460468 677 ntTSL 3 BASIC3.82□□□□□ -1.8
ERCC2P18074 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC3.82□□□□□ -1.8
ERCC2P18074 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC3.82□□□□□ -1.8
ERCC2P18074 TMEM251P1-201ENST00000503717 318 ntBASIC3.82□□□□□ -1.8
ERCC2P18074 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC3.82□□□□□ -1.8
ERCC2P18074 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC3.82□□□□□ -1.8
ERCC2P18074 RNU6-583P-201ENST00000516012 92 ntBASIC3.82□□□□□ -1.8
ERCC2P18074 RNY4P37-201ENST00000516225 96 ntBASIC3.82□□□□□ -1.8
ERCC2P18074 RNU6-1073P-201ENST00000517182 106 ntBASIC3.82□□□□□ -1.8
ERCC2P18074 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC3.82□□□□□ -1.8
ERCC2P18074 IGKV3OR22-2-201ENST00000517943 313 ntBASIC3.82□□□□□ -1.8
ERCC2P18074 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC3.82□□□□□ -1.8
ERCC2P18074 MTND2P32-201ENST00000521584 1038 ntBASIC3.82□□□□□ -1.8
ERCC2P18074 AC007991.1-201ENST00000522680 631 ntBASIC3.82□□□□□ -1.8
ERCC2P18074 AC109635.4-202ENST00000531666 412 ntBASIC3.82□□□□□ -1.8
ERCC2P18074 AL121766.1-201ENST00000547436 487 ntBASIC3.82□□□□□ -1.8
ERCC2P18074 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC3.82□□□□□ -1.8
ERCC2P18074 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC3.82□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 82.9 ms