Protein–RNA interactions for Protein: P12035

KRT3, Keratin, type II cytoskeletal 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT3P12035 KMT2E-216ENST00000622386 1588 ntTSL 5 BASIC3.72□□□□□ -1.81
KRT3P12035 AL122126.1-201ENST00000546905 1318 ntBASIC3.71□□□□□ -1.81
KRT3P12035 ZNF285B-201ENST00000561698 1767 ntBASIC3.71□□□□□ -1.81
KRT3P12035 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
KRT3P12035 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
KRT3P12035 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
KRT3P12035 RNU6-374P-201ENST00000364146 108 ntBASIC3.71□□□□□ -1.82
KRT3P12035 RNU4-51P-201ENST00000364206 140 ntBASIC3.71□□□□□ -1.82
KRT3P12035 AL023807.1-201ENST00000407932 359 ntBASIC3.71□□□□□ -1.82
KRT3P12035 RNU6ATAC-201ENST00000408749 126 ntBASIC3.71□□□□□ -1.82
KRT3P12035 RNU4-22P-201ENST00000411058 166 ntBASIC3.71□□□□□ -1.82
KRT3P12035 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.71□□□□□ -1.82
KRT3P12035 AC063965.1-201ENST00000416679 499 ntTSL 3 BASIC3.71□□□□□ -1.82
KRT3P12035 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC3.71□□□□□ -1.82
KRT3P12035 Z75741.2-201ENST00000417272 1167 ntBASIC3.71□□□□□ -1.82
KRT3P12035 AC068533.1-201ENST00000418542 415 ntBASIC3.71□□□□□ -1.82
KRT3P12035 RPS3AP37-201ENST00000419176 745 ntBASIC3.71□□□□□ -1.82
KRT3P12035 KRR1P1-201ENST00000419430 803 ntBASIC3.71□□□□□ -1.82
KRT3P12035 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
KRT3P12035 USP9YP31-201ENST00000431405 881 ntBASIC3.71□□□□□ -1.82
KRT3P12035 USP9YP24-201ENST00000434374 697 ntBASIC3.71□□□□□ -1.82
KRT3P12035 B3GNT2P1-201ENST00000434960 952 ntBASIC3.71□□□□□ -1.82
KRT3P12035 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC3.71□□□□□ -1.82
KRT3P12035 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
KRT3P12035 USP9YP17-201ENST00000444617 696 ntBASIC3.71□□□□□ -1.82
KRT3P12035 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC3.71□□□□□ -1.82
KRT3P12035 AC108734.3-201ENST00000481241 1165 ntBASIC3.71□□□□□ -1.82
KRT3P12035 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC3.71□□□□□ -1.82
KRT3P12035 ACTG1P13-201ENST00000486987 1043 ntBASIC3.71□□□□□ -1.82
KRT3P12035 SETP14-201ENST00000497538 873 ntBASIC3.71□□□□□ -1.82
KRT3P12035 RHOBTB3-204ENST00000504179 883 ntTSL 5 BASIC3.71□□□□□ -1.82
KRT3P12035 AC113347.3-201ENST00000509113 148 ntBASIC3.71□□□□□ -1.82
KRT3P12035 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
KRT3P12035 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC3.71□□□□□ -1.82
KRT3P12035 AC104057.1-201ENST00000515547 497 ntBASIC3.71□□□□□ -1.82
KRT3P12035 RNU1-95P-201ENST00000516357 160 ntBASIC3.71□□□□□ -1.82
KRT3P12035 RNU1-128P-201ENST00000516704 160 ntBASIC3.71□□□□□ -1.82
KRT3P12035 SNORA48.10-201ENST00000516965 160 ntBASIC3.71□□□□□ -1.82
KRT3P12035 AC090502.2-201ENST00000549267 280 ntBASIC3.71□□□□□ -1.82
KRT3P12035 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC3.71□□□□□ -1.82
KRT3P12035 LINC02274-201ENST00000555539 1174 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
KRT3P12035 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC3.71□□□□□ -1.82
KRT3P12035 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC3.71□□□□□ -1.82
KRT3P12035 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC3.71□□□□□ -1.82
KRT3P12035 AC006116.10-201ENST00000591836 581 ntBASIC3.71□□□□□ -1.82
KRT3P12035 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC3.71□□□□□ -1.82
KRT3P12035 AL592295.2-201ENST00000612578 206 ntBASIC3.71□□□□□ -1.82
KRT3P12035 U4.6-201ENST00000621618 127 ntBASIC3.71□□□□□ -1.82
KRT3P12035 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC3.71□□□□□ -1.82
KRT3P12035 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC3.71□□□□□ -1.82
KRT3P12035 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.71□□□□□ -1.82
KRT3P12035 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC3.71□□□□□ -1.82
KRT3P12035 MTCO1P24-201ENST00000515438 1558 ntBASIC3.71□□□□□ -1.82
KRT3P12035 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
KRT3P12035 OTUD4P1-201ENST00000237841 3067 ntBASIC3.7□□□□□ -1.82
KRT3P12035 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.7□□□□□ -1.82
KRT3P12035 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.7□□□□□ -1.82
KRT3P12035 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC3.7□□□□□ -1.82
KRT3P12035 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
KRT3P12035 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
KRT3P12035 FRG1CP-201ENST00000358464 769 ntBASIC3.7□□□□□ -1.82
KRT3P12035 RNU6-600P-201ENST00000362524 99 ntBASIC3.7□□□□□ -1.82
KRT3P12035 RNA5SP124-201ENST00000362739 110 ntBASIC3.7□□□□□ -1.82
KRT3P12035 RNU4-68P-201ENST00000364314 141 ntBASIC3.7□□□□□ -1.82
KRT3P12035 AL359837.1-201ENST00000381357 287 ntBASIC3.7□□□□□ -1.82
KRT3P12035 MT-TC-201ENST00000387405 66 ntBASIC3.7□□□□□ -1.82
KRT3P12035 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC3.7□□□□□ -1.82
KRT3P12035 RNU2-28P-201ENST00000410457 189 ntBASIC3.7□□□□□ -1.82
KRT3P12035 RAB9AP3-201ENST00000412737 573 ntBASIC3.7□□□□□ -1.82
KRT3P12035 RPL36AP36-201ENST00000418616 301 ntBASIC3.7□□□□□ -1.82
KRT3P12035 DBIP2-201ENST00000419076 262 ntBASIC3.7□□□□□ -1.82
KRT3P12035 MRPS36P1-201ENST00000421291 307 ntBASIC3.7□□□□□ -1.82
KRT3P12035 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC3.7□□□□□ -1.82
KRT3P12035 AL035410.1-201ENST00000427409 427 ntBASIC3.7□□□□□ -1.82
KRT3P12035 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC3.7□□□□□ -1.82
KRT3P12035 AL158071.1-201ENST00000430315 461 ntBASIC3.7□□□□□ -1.82
KRT3P12035 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC3.7□□□□□ -1.82
KRT3P12035 AL606517.1-201ENST00000446914 387 ntBASIC3.7□□□□□ -1.82
KRT3P12035 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
KRT3P12035 RAB9AP1-201ENST00000449393 573 ntBASIC3.7□□□□□ -1.82
KRT3P12035 RN7SL330P-201ENST00000469709 307 ntBASIC3.7□□□□□ -1.82
KRT3P12035 FCF1P3-201ENST00000496394 590 ntBASIC3.7□□□□□ -1.82
KRT3P12035 RNF138P1-201ENST00000502765 546 ntBASIC3.7□□□□□ -1.82
KRT3P12035 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC3.7□□□□□ -1.82
KRT3P12035 IGKV2D-36-201ENST00000518643 226 ntBASIC3.7□□□□□ -1.82
KRT3P12035 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC3.7□□□□□ -1.82
KRT3P12035 PDCL2P2-201ENST00000533651 189 ntBASIC3.7□□□□□ -1.82
KRT3P12035 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC3.7□□□□□ -1.82
KRT3P12035 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.7□□□□□ -1.82
KRT3P12035 AL132857.1-201ENST00000555180 708 ntBASIC3.7□□□□□ -1.82
KRT3P12035 MEG8-215ENST00000555354 469 ntTSL 3 BASIC3.7□□□□□ -1.82
KRT3P12035 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC3.7□□□□□ -1.82
KRT3P12035 AC138915.2-201ENST00000569776 97 ntBASIC3.7□□□□□ -1.82
KRT3P12035 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC3.7□□□□□ -1.82
KRT3P12035 MTND1P8-201ENST00000571424 950 ntBASIC3.7□□□□□ -1.82
KRT3P12035 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC3.7□□□□□ -1.82
KRT3P12035 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.7□□□□□ -1.82
KRT3P12035 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC3.7□□□□□ -1.82
KRT3P12035 U73479.1-201ENST00000618062 168 ntBASIC3.7□□□□□ -1.82
KRT3P12035 AC022149.2-201ENST00000621061 203 ntBASIC3.7□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 96 ms