Protein–RNA interactions for Protein: P09429

HMGB1, High mobility group protein B1, humanhuman

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P09429 AC233728.2-201ENST00000425348 757 ntBASIC5.18□□□□□ -1.58
HMGB1P09429 RPEP3-201ENST00000425462 676 ntBASIC5.18□□□□□ -1.58
HMGB1P09429 OR5BE1P-201ENST00000425977 939 ntBASIC5.18□□□□□ -1.58
HMGB1P09429 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC5.18□□□□□ -1.58
HMGB1P09429 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC5.18□□□□□ -1.58
HMGB1P09429 AC090774.1-201ENST00000435925 246 ntBASIC5.18□□□□□ -1.58
HMGB1P09429 Z80107.1-201ENST00000436830 412 ntBASIC5.18□□□□□ -1.58
HMGB1P09429 AC112653.1-201ENST00000443851 386 ntBASIC5.18□□□□□ -1.58
HMGB1P09429 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC5.18□□□□□ -1.58
HMGB1P09429 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC5.18□□□□□ -1.58
HMGB1P09429 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC5.18□□□□□ -1.58
HMGB1P09429 RPL23AP72-201ENST00000492447 435 ntBASIC5.18□□□□□ -1.58
HMGB1P09429 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC5.18□□□□□ -1.58
HMGB1P09429 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC5.18□□□□□ -1.58
HMGB1P09429 RNA5SP216-201ENST00000516111 123 ntBASIC5.18□□□□□ -1.58
HMGB1P09429 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC5.18□□□□□ -1.58
HMGB1P09429 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC5.18□□□□□ -1.58
HMGB1P09429 AC011853.2-201ENST00000526901 774 ntTSL 5 BASIC5.18□□□□□ -1.58
HMGB1P09429 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC5.18□□□□□ -1.58
HMGB1P09429 PDCL2P2-201ENST00000533651 189 ntBASIC5.18□□□□□ -1.58
HMGB1P09429 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC5.18□□□□□ -1.58
HMGB1P09429 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC5.18□□□□□ -1.58
HMGB1P09429 MIR3921-201ENST00000577308 85 ntBASIC5.18□□□□□ -1.58
HMGB1P09429 AC006539.2-201ENST00000601729 572 ntBASIC5.18□□□□□ -1.58
HMGB1P09429 AL034351.1-201ENST00000605288 668 ntBASIC5.18□□□□□ -1.58
HMGB1P09429 RNU6-88P-201ENST00000606801 100 ntBASIC5.18□□□□□ -1.58
HMGB1P09429 AC019193.2-201ENST00000610012 634 ntBASIC5.18□□□□□ -1.58
HMGB1P09429 AL139418.1-201ENST00000613613 177 ntBASIC5.18□□□□□ -1.58
HMGB1P09429 SNX18P1Y-201ENST00000616231 511 ntBASIC5.18□□□□□ -1.58
HMGB1P09429 MIR6076-201ENST00000617521 113 ntBASIC5.18□□□□□ -1.58
HMGB1P09429 MIR6130-201ENST00000619419 109 ntBASIC5.18□□□□□ -1.58
HMGB1P09429 MIR7154-201ENST00000620673 73 ntBASIC5.18□□□□□ -1.58
HMGB1P09429 OR5BE1P-202ENST00000641168 1176 ntBASIC5.18□□□□□ -1.58
HMGB1P09429 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
HMGB1P09429 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC5.18□□□□□ -1.58
HMGB1P09429 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC5.18□□□□□ -1.58
HMGB1P09429 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
HMGB1P09429 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
HMGB1P09429 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
HMGB1P09429 RNU6-462P-201ENST00000362659 105 ntBASIC5.17□□□□□ -1.58
HMGB1P09429 RNU6-853P-201ENST00000364306 107 ntBASIC5.17□□□□□ -1.58
HMGB1P09429 RNU6-114P-201ENST00000384704 105 ntBASIC5.17□□□□□ -1.58
HMGB1P09429 MIR192-201ENST00000384915 110 ntBASIC5.17□□□□□ -1.58
HMGB1P09429 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC5.17□□□□□ -1.58
HMGB1P09429 AL138878.1-201ENST00000405131 347 ntBASIC5.17□□□□□ -1.58
HMGB1P09429 AL354719.1-201ENST00000406535 843 ntBASIC5.17□□□□□ -1.58
HMGB1P09429 SNORA11F-201ENST00000408237 128 ntBASIC5.17□□□□□ -1.58
HMGB1P09429 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC5.17□□□□□ -1.58
HMGB1P09429 SNRPFP1-201ENST00000414761 252 ntBASIC5.17□□□□□ -1.58
HMGB1P09429 TMSB10P2-201ENST00000416049 131 ntBASIC5.17□□□□□ -1.58
HMGB1P09429 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC5.17□□□□□ -1.58
HMGB1P09429 TXNL1P1-201ENST00000429528 554 ntBASIC5.17□□□□□ -1.58
HMGB1P09429 RPEP2-201ENST00000432149 701 ntBASIC5.17□□□□□ -1.58
HMGB1P09429 MTND1P32-201ENST00000433043 938 ntBASIC5.17□□□□□ -1.58
HMGB1P09429 LSM1P1-201ENST00000438629 273 ntBASIC5.17□□□□□ -1.58
HMGB1P09429 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC5.17□□□□□ -1.58
HMGB1P09429 ABCF2P2-201ENST00000450549 296 ntBASIC5.17□□□□□ -1.58
HMGB1P09429 AC104308.1-201ENST00000454621 333 ntBASIC5.17□□□□□ -1.58
HMGB1P09429 ANKRD26P4-201ENST00000455755 950 ntBASIC5.17□□□□□ -1.58
HMGB1P09429 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC5.17□□□□□ -1.58
HMGB1P09429 RPL21P126-201ENST00000470049 478 ntBASIC5.17□□□□□ -1.58
HMGB1P09429 AC104685.1-201ENST00000502445 371 ntBASIC5.17□□□□□ -1.58
HMGB1P09429 AK3P4-201ENST00000504283 583 ntBASIC5.17□□□□□ -1.58
HMGB1P09429 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC5.17□□□□□ -1.58
HMGB1P09429 AC034244.1-201ENST00000507687 207 ntBASIC5.17□□□□□ -1.58
HMGB1P09429 AC111000.3-201ENST00000508057 576 ntBASIC5.17□□□□□ -1.58
HMGB1P09429 AC105185.1-201ENST00000518705 535 ntBASIC5.17□□□□□ -1.58
HMGB1P09429 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC5.17□□□□□ -1.58
HMGB1P09429 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC5.17□□□□□ -1.58
HMGB1P09429 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC5.17□□□□□ -1.58
HMGB1P09429 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC5.17□□□□□ -1.58
HMGB1P09429 AC011260.1-201ENST00000578420 472 ntBASIC5.17□□□□□ -1.58
HMGB1P09429 PDZPH1P-202ENST00000602846 722 ntTSL 3 BASIC5.17□□□□□ -1.58
HMGB1P09429 AC106791.2-201ENST00000604680 391 ntBASIC5.17□□□□□ -1.58
HMGB1P09429 AP000254.1-201ENST00000609934 520 ntBASIC5.17□□□□□ -1.58
HMGB1P09429 TUSC7.1-201ENST00000610969 165 ntBASIC5.17□□□□□ -1.58
HMGB1P09429 AL021997.2-201ENST00000615674 271 ntBASIC5.17□□□□□ -1.58
HMGB1P09429 uc_338.13-201ENST00000618243 179 ntBASIC5.17□□□□□ -1.58
HMGB1P09429 AL607023.1-201ENST00000620045 248 ntBASIC5.17□□□□□ -1.58
HMGB1P09429 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
HMGB1P09429 AL356596.1-201ENST00000624230 379 ntBASIC5.17□□□□□ -1.58
HMGB1P09429 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC5.17□□□□□ -1.58
HMGB1P09429 FP325313.1-201ENST00000638228 703 ntBASIC5.17□□□□□ -1.58
HMGB1P09429 AC011460.1-201ENST00000636268 1834 ntBASIC5.17□□□□□ -1.58
HMGB1P09429 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC5.17□□□□□ -1.58
HMGB1P09429 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC5.17□□□□□ -1.58
HMGB1P09429 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
HMGB1P09429 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
HMGB1P09429 AC008568.2-201ENST00000623862 2313 ntBASIC5.17□□□□□ -1.58
HMGB1P09429 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC5.16□□□□□ -1.58
HMGB1P09429 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC5.16□□□□□ -1.58
HMGB1P09429 TRIQK-211ENST00000520430 1829 ntAPPRIS P1 TSL 2 BASIC5.16□□□□□ -1.58
HMGB1P09429 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
HMGB1P09429 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC5.16□□□□□ -1.58
HMGB1P09429 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
HMGB1P09429 RNU1-108P-201ENST00000362556 161 ntBASIC5.16□□□□□ -1.58
HMGB1P09429 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC5.16□□□□□ -1.58
HMGB1P09429 PVALB-202ENST00000404171 422 ntTSL 2 BASIC5.16□□□□□ -1.58
HMGB1P09429 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
HMGB1P09429 RNU6-1077P-201ENST00000410506 102 ntBASIC5.16□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 98.6 ms