Protein–RNA interactions for Protein: P03999

OPN1SW, Short-wave-sensitive opsin 1, humanhuman

Predictions only

Length 348 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OPN1SWP03999 SSR3-208ENST00000496050 579 ntTSL 4 BASIC2.71□□□□□ -1.98
OPN1SWP03999 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC2.71□□□□□ -1.98
OPN1SWP03999 CRISP1-203ENST00000505118 1296 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
OPN1SWP03999 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC2.71□□□□□ -1.98
OPN1SWP03999 AC108157.1-201ENST00000510511 539 ntBASIC2.71□□□□□ -1.98
OPN1SWP03999 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC2.71□□□□□ -1.98
OPN1SWP03999 AC008885.1-201ENST00000514930 301 ntBASIC2.71□□□□□ -1.98
OPN1SWP03999 RN7SKP282-201ENST00000516824 299 ntBASIC2.71□□□□□ -1.98
OPN1SWP03999 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC2.71□□□□□ -1.98
OPN1SWP03999 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC2.71□□□□□ -1.98
OPN1SWP03999 AC022784.5-201ENST00000522241 437 ntBASIC2.71□□□□□ -1.98
OPN1SWP03999 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC2.71□□□□□ -1.98
OPN1SWP03999 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC2.71□□□□□ -1.98
OPN1SWP03999 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC2.71□□□□□ -1.98
OPN1SWP03999 AC090751.1-201ENST00000566966 267 ntBASIC2.71□□□□□ -1.98
OPN1SWP03999 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.71□□□□□ -1.98
OPN1SWP03999 AC245128.3-201ENST00000594721 748 ntBASIC2.71□□□□□ -1.98
OPN1SWP03999 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC2.71□□□□□ -1.98
OPN1SWP03999 AC079880.2-201ENST00000603790 1213 ntBASIC2.71□□□□□ -1.98
OPN1SWP03999 AL359535.1-201ENST00000612100 1087 ntBASIC2.71□□□□□ -1.98
OPN1SWP03999 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC2.71□□□□□ -1.98
OPN1SWP03999 AC009032.1-201ENST00000617574 431 ntBASIC2.71□□□□□ -1.98
OPN1SWP03999 AC022509.4-201ENST00000621404 572 ntBASIC2.71□□□□□ -1.98
OPN1SWP03999 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
OPN1SWP03999 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
OPN1SWP03999 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
OPN1SWP03999 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
OPN1SWP03999 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC2.7□□□□□ -1.98
OPN1SWP03999 XPOTP1-201ENST00000443317 2398 ntBASIC2.7□□□□□ -1.98
OPN1SWP03999 SNORA38.1-201ENST00000364172 131 ntBASIC2.7□□□□□ -1.98
OPN1SWP03999 AL031121.1-201ENST00000406553 254 ntBASIC2.7□□□□□ -1.98
OPN1SWP03999 RNU6ATAC10P-201ENST00000408635 111 ntBASIC2.7□□□□□ -1.98
OPN1SWP03999 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC2.7□□□□□ -1.98
OPN1SWP03999 EI24P1-201ENST00000416584 867 ntBASIC2.7□□□□□ -1.98
OPN1SWP03999 FO393419.3-201ENST00000428741 282 ntBASIC2.7□□□□□ -1.98
OPN1SWP03999 OR51AB1P-201ENST00000429046 620 ntBASIC2.7□□□□□ -1.98
OPN1SWP03999 AC006994.1-201ENST00000438212 839 ntBASIC2.7□□□□□ -1.98
OPN1SWP03999 AC024084.1-201ENST00000440744 455 ntTSL 5 BASIC2.7□□□□□ -1.98
OPN1SWP03999 HMGB1P48-201ENST00000446155 598 ntBASIC2.7□□□□□ -1.98
OPN1SWP03999 AC093392.2-201ENST00000450682 337 ntBASIC2.7□□□□□ -1.98
OPN1SWP03999 TEX41-209ENST00000451478 452 ntTSL 2 BASIC2.7□□□□□ -1.98
OPN1SWP03999 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC2.7□□□□□ -1.98
OPN1SWP03999 snoU13.7-201ENST00000459220 104 ntBASIC2.7□□□□□ -1.98
OPN1SWP03999 RNU6-775P-201ENST00000459318 96 ntBASIC2.7□□□□□ -1.98
OPN1SWP03999 RN7SL807P-201ENST00000470923 297 ntBASIC2.7□□□□□ -1.98
OPN1SWP03999 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC2.7□□□□□ -1.98
OPN1SWP03999 AC104689.1-201ENST00000473356 768 ntBASIC2.7□□□□□ -1.98
OPN1SWP03999 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC2.7□□□□□ -1.98
OPN1SWP03999 NCOR1P1-202ENST00000486162 291 ntBASIC2.7□□□□□ -1.98
OPN1SWP03999 AC006445.1-201ENST00000491925 405 ntBASIC2.7□□□□□ -1.98
OPN1SWP03999 AC008780.2-201ENST00000509844 820 ntTSL 2 BASIC2.7□□□□□ -1.98
OPN1SWP03999 LINC01088-208ENST00000511895 795 ntTSL 2 BASIC2.7□□□□□ -1.98
OPN1SWP03999 AC008494.2-201ENST00000514544 370 ntBASIC2.7□□□□□ -1.98
OPN1SWP03999 RNU6-751P-201ENST00000516382 101 ntBASIC2.7□□□□□ -1.98
OPN1SWP03999 AC009812.2-201ENST00000517657 457 ntBASIC2.7□□□□□ -1.98
OPN1SWP03999 TMEM68-214ENST00000523073 536 ntTSL 3 BASIC2.7□□□□□ -1.98
OPN1SWP03999 AP001207.1-201ENST00000524051 481 ntBASIC2.7□□□□□ -1.98
OPN1SWP03999 FAM60DP-201ENST00000524174 632 ntBASIC2.7□□□□□ -1.98
OPN1SWP03999 AC004923.2-201ENST00000529649 369 ntBASIC2.7□□□□□ -1.98
OPN1SWP03999 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC2.7□□□□□ -1.98
OPN1SWP03999 ZFAND6-208ENST00000558688 780 ntTSL 2 BASIC2.7□□□□□ -1.98
OPN1SWP03999 AC067805.1-201ENST00000559344 470 ntBASIC2.7□□□□□ -1.98
OPN1SWP03999 AC090616.5-202ENST00000582111 297 ntBASIC2.7□□□□□ -1.98
OPN1SWP03999 AC006116.7-201ENST00000590141 756 ntBASIC2.7□□□□□ -1.98
OPN1SWP03999 HMGN2P28-201ENST00000606102 262 ntBASIC2.7□□□□□ -1.98
OPN1SWP03999 CR589904.2-201ENST00000612533 440 ntBASIC2.7□□□□□ -1.98
OPN1SWP03999 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC2.7□□□□□ -1.98
OPN1SWP03999 AP001002.2-201ENST00000625137 386 ntBASIC2.7□□□□□ -1.98
OPN1SWP03999 HDX-206ENST00000506585 6158 ntTSL 2 BASIC2.7□□□□□ -1.98
OPN1SWP03999 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC2.69□□□□□ -1.98
OPN1SWP03999 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
OPN1SWP03999 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
OPN1SWP03999 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
OPN1SWP03999 AC083799.1-201ENST00000366451 910 ntBASIC2.69□□□□□ -1.98
OPN1SWP03999 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC2.69□□□□□ -1.98
OPN1SWP03999 AGR3-202ENST00000402239 563 ntTSL 2 BASIC2.69□□□□□ -1.98
OPN1SWP03999 BTBD10P2-201ENST00000404779 676 ntBASIC2.69□□□□□ -1.98
OPN1SWP03999 RPL5P18-201ENST00000406671 891 ntBASIC2.69□□□□□ -1.98
OPN1SWP03999 RN7SKP123-201ENST00000410732 291 ntBASIC2.69□□□□□ -1.98
OPN1SWP03999 AC244098.2-201ENST00000422068 99 ntBASIC2.69□□□□□ -1.98
OPN1SWP03999 AC007403.1-201ENST00000427579 567 ntTSL 4 BASIC2.69□□□□□ -1.98
OPN1SWP03999 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC2.69□□□□□ -1.98
OPN1SWP03999 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC2.69□□□□□ -1.98
OPN1SWP03999 RPL21P112-201ENST00000434403 463 ntBASIC2.69□□□□□ -1.98
OPN1SWP03999 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC2.69□□□□□ -1.98
OPN1SWP03999 RPL7P29-201ENST00000437151 728 ntBASIC2.69□□□□□ -1.98
OPN1SWP03999 HMGB1P12-201ENST00000438594 598 ntBASIC2.69□□□□□ -1.98
OPN1SWP03999 AC093156.1-201ENST00000440382 670 ntBASIC2.69□□□□□ -1.98
OPN1SWP03999 CYCSP32-201ENST00000440548 321 ntBASIC2.69□□□□□ -1.98
OPN1SWP03999 AL592437.1-201ENST00000443781 492 ntBASIC2.69□□□□□ -1.98
OPN1SWP03999 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC2.69□□□□□ -1.98
OPN1SWP03999 AC017015.1-201ENST00000477387 286 ntBASIC2.69□□□□□ -1.98
OPN1SWP03999 DYNLL1P6-201ENST00000503440 264 ntBASIC2.69□□□□□ -1.98
OPN1SWP03999 RN7SKP57-201ENST00000517248 293 ntBASIC2.69□□□□□ -1.98
OPN1SWP03999 SNORA31.26-201ENST00000517250 137 ntBASIC2.69□□□□□ -1.98
OPN1SWP03999 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC2.69□□□□□ -1.98
OPN1SWP03999 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC2.69□□□□□ -1.98
OPN1SWP03999 MS4A1-205ENST00000528313 928 ntTSL 2 BASIC2.69□□□□□ -1.98
OPN1SWP03999 AC018371.1-201ENST00000584560 640 ntTSL 3 BASIC2.69□□□□□ -1.98
OPN1SWP03999 AC004160.1-210ENST00000599875 689 ntTSL 5 BASIC2.69□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 100.5 ms