Protein–RNA interactions for Protein: P03905

MT-ND4, NADH-ubiquinone oxidoreductase chain 4, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND4P03905 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC2.78□□□□□ -1.96
MT-ND4P03905 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC2.78□□□□□ -1.96
MT-ND4P03905 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
MT-ND4P03905 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
MT-ND4P03905 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC2.78□□□□□ -1.96
MT-ND4P03905 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC2.78□□□□□ -1.96
MT-ND4P03905 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
MT-ND4P03905 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
MT-ND4P03905 RNU4-35P-201ENST00000362588 141 ntBASIC2.78□□□□□ -1.96
MT-ND4P03905 RNU1-70P-201ENST00000362618 164 ntBASIC2.78□□□□□ -1.96
MT-ND4P03905 RN7SKP123-201ENST00000410732 291 ntBASIC2.78□□□□□ -1.96
MT-ND4P03905 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC2.78□□□□□ -1.96
MT-ND4P03905 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC2.78□□□□□ -1.96
MT-ND4P03905 AC008280.1-201ENST00000418851 412 ntBASIC2.78□□□□□ -1.96
MT-ND4P03905 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC2.78□□□□□ -1.96
MT-ND4P03905 MTCYBP24-201ENST00000420387 1106 ntBASIC2.78□□□□□ -1.96
MT-ND4P03905 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC2.78□□□□□ -1.96
MT-ND4P03905 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC2.78□□□□□ -1.96
MT-ND4P03905 AL009174.1-201ENST00000426577 416 ntBASIC2.78□□□□□ -1.96
MT-ND4P03905 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC2.78□□□□□ -1.96
MT-ND4P03905 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC2.78□□□□□ -1.96
MT-ND4P03905 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC2.78□□□□□ -1.96
MT-ND4P03905 ELOCP13-201ENST00000443934 329 ntBASIC2.78□□□□□ -1.96
MT-ND4P03905 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC2.78□□□□□ -1.96
MT-ND4P03905 RPS26P56-201ENST00000444468 240 ntBASIC2.78□□□□□ -1.96
MT-ND4P03905 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC2.78□□□□□ -1.96
MT-ND4P03905 AL024509.2-201ENST00000493462 493 ntBASIC2.78□□□□□ -1.96
MT-ND4P03905 HMGB1P22-201ENST00000505315 124 ntBASIC2.78□□□□□ -1.96
MT-ND4P03905 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC2.78□□□□□ -1.96
MT-ND4P03905 HMGN1P15-201ENST00000513870 295 ntBASIC2.78□□□□□ -1.96
MT-ND4P03905 RNU1-61P-201ENST00000516107 151 ntBASIC2.78□□□□□ -1.96
MT-ND4P03905 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC2.78□□□□□ -1.96
MT-ND4P03905 TRMT10BP1-201ENST00000519377 943 ntBASIC2.78□□□□□ -1.96
MT-ND4P03905 AC011131.1-201ENST00000521224 252 ntTSL 2 BASIC2.78□□□□□ -1.96
MT-ND4P03905 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC2.78□□□□□ -1.96
MT-ND4P03905 AC239860.2-201ENST00000525886 270 ntBASIC2.78□□□□□ -1.96
MT-ND4P03905 OR5B10P-201ENST00000532869 642 ntBASIC2.78□□□□□ -1.96
MT-ND4P03905 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC2.78□□□□□ -1.96
MT-ND4P03905 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC2.78□□□□□ -1.96
MT-ND4P03905 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC2.78□□□□□ -1.96
MT-ND4P03905 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC2.78□□□□□ -1.96
MT-ND4P03905 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC2.78□□□□□ -1.96
MT-ND4P03905 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC2.78□□□□□ -1.96
MT-ND4P03905 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC2.78□□□□□ -1.96
MT-ND4P03905 AL009028.1-201ENST00000604895 802 ntBASIC2.78□□□□□ -1.96
MT-ND4P03905 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC2.78□□□□□ -1.96
MT-ND4P03905 AL590282.1-201ENST00000610379 1136 ntBASIC2.78□□□□□ -1.96
MT-ND4P03905 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC2.78□□□□□ -1.96
MT-ND4P03905 AL034408.1-202ENST00000636088 415 ntBASIC2.78□□□□□ -1.96
MT-ND4P03905 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC2.78□□□□□ -1.96
MT-ND4P03905 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC2.78□□□□□ -1.97
MT-ND4P03905 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
MT-ND4P03905 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
MT-ND4P03905 ZNF33BP1-201ENST00000452497 1834 ntBASIC2.77□□□□□ -1.97
MT-ND4P03905 AC103988.1-201ENST00000566382 2177 ntBASIC2.77□□□□□ -1.97
MT-ND4P03905 ZNF37BP-203ENST00000452306 1352 ntBASIC2.77□□□□□ -1.97
MT-ND4P03905 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
MT-ND4P03905 C2orf76-201ENST00000334816 676 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
MT-ND4P03905 RNU1-64P-201ENST00000365443 163 ntBASIC2.77□□□□□ -1.97
MT-ND4P03905 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC2.77□□□□□ -1.97
MT-ND4P03905 RNU6-629P-201ENST00000384061 103 ntBASIC2.77□□□□□ -1.97
MT-ND4P03905 MIR218-2-201ENST00000385006 110 ntBASIC2.77□□□□□ -1.97
MT-ND4P03905 SNORD65C-201ENST00000390962 71 ntBASIC2.77□□□□□ -1.97
MT-ND4P03905 PTGES3P2-201ENST00000407942 482 ntBASIC2.77□□□□□ -1.97
MT-ND4P03905 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC2.77□□□□□ -1.97
MT-ND4P03905 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC2.77□□□□□ -1.97
MT-ND4P03905 DPYD-AS2-201ENST00000422259 788 ntTSL 3 BASIC2.77□□□□□ -1.97
MT-ND4P03905 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC2.77□□□□□ -1.97
MT-ND4P03905 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC2.77□□□□□ -1.97
MT-ND4P03905 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC2.77□□□□□ -1.97
MT-ND4P03905 AC093151.1-201ENST00000427711 313 ntBASIC2.77□□□□□ -1.97
MT-ND4P03905 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC2.77□□□□□ -1.97
MT-ND4P03905 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC2.77□□□□□ -1.97
MT-ND4P03905 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC2.77□□□□□ -1.97
MT-ND4P03905 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
MT-ND4P03905 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC2.77□□□□□ -1.97
MT-ND4P03905 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC2.77□□□□□ -1.97
MT-ND4P03905 PRDX3P4-201ENST00000470828 747 ntBASIC2.77□□□□□ -1.97
MT-ND4P03905 RPS4XP6-201ENST00000477670 797 ntBASIC2.77□□□□□ -1.97
MT-ND4P03905 CRISP1-203ENST00000505118 1296 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
MT-ND4P03905 MTND3P24-201ENST00000506306 329 ntBASIC2.77□□□□□ -1.97
MT-ND4P03905 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC2.77□□□□□ -1.97
MT-ND4P03905 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC2.77□□□□□ -1.97
MT-ND4P03905 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC2.77□□□□□ -1.97
MT-ND4P03905 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC2.77□□□□□ -1.97
MT-ND4P03905 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC2.77□□□□□ -1.97
MT-ND4P03905 CR383656.14-201ENST00000551951 406 ntBASIC2.77□□□□□ -1.97
MT-ND4P03905 AC005476.1-201ENST00000554427 397 ntBASIC2.77□□□□□ -1.97
MT-ND4P03905 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
MT-ND4P03905 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC2.77□□□□□ -1.97
MT-ND4P03905 LINC2194-201ENST00000567127 454 ntTSL 3 BASIC2.77□□□□□ -1.97
MT-ND4P03905 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC2.77□□□□□ -1.97
MT-ND4P03905 AC034268.2-201ENST00000571784 482 ntBASIC2.77□□□□□ -1.97
MT-ND4P03905 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC2.77□□□□□ -1.97
MT-ND4P03905 AC093227.2-201ENST00000589357 285 ntBASIC2.77□□□□□ -1.97
MT-ND4P03905 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC2.77□□□□□ -1.97
MT-ND4P03905 AL020997.3-201ENST00000602843 359 ntBASIC2.77□□□□□ -1.97
MT-ND4P03905 AC016542.1-201ENST00000608259 493 ntBASIC2.77□□□□□ -1.97
MT-ND4P03905 MIR8084-201ENST00000614105 89 ntBASIC2.77□□□□□ -1.97
MT-ND4P03905 U73479.1-201ENST00000618062 168 ntBASIC2.77□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 93 ms