Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
COL1A1P02452 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
COL1A1P02452 AL445437.1-201ENST00000623157 3087 ntBASIC3.1□□□□□ -1.91
COL1A1P02452 RNU6-618P-201ENST00000363518 112 ntBASIC3.09□□□□□ -1.91
COL1A1P02452 AL589994.1-201ENST00000404962 340 ntBASIC3.09□□□□□ -1.91
COL1A1P02452 RNA5SP425-201ENST00000410336 112 ntBASIC3.09□□□□□ -1.91
COL1A1P02452 AC080125.1-201ENST00000414888 684 ntBASIC3.09□□□□□ -1.91
COL1A1P02452 MTND4LP21-201ENST00000415303 295 ntBASIC3.09□□□□□ -1.91
COL1A1P02452 AC005189.1-201ENST00000431286 310 ntBASIC3.09□□□□□ -1.91
COL1A1P02452 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC3.09□□□□□ -1.91
COL1A1P02452 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC3.09□□□□□ -1.91
COL1A1P02452 DNAJC19P3-201ENST00000594491 331 ntBASIC3.09□□□□□ -1.91
COL1A1P02452 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
COL1A1P02452 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.09□□□□□ -1.91
COL1A1P02452 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.09□□□□□ -1.91
COL1A1P02452 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.92
COL1A1P02452 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC3.09□□□□□ -1.92
COL1A1P02452 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC3.09□□□□□ -1.92
COL1A1P02452 SNORA51.4-201ENST00000364993 124 ntBASIC3.09□□□□□ -1.92
COL1A1P02452 MIR27B-201ENST00000385129 97 ntBASIC3.09□□□□□ -1.92
COL1A1P02452 RN7SKP223-201ENST00000410582 62 ntBASIC3.09□□□□□ -1.92
COL1A1P02452 TEX41-204ENST00000423031 491 ntTSL 4 BASIC3.09□□□□□ -1.92
COL1A1P02452 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC3.09□□□□□ -1.92
COL1A1P02452 AC011816.1-201ENST00000441346 546 ntBASIC3.09□□□□□ -1.92
COL1A1P02452 VN1R48P-201ENST00000448149 1036 ntBASIC3.09□□□□□ -1.92
COL1A1P02452 AC103975.1-201ENST00000482506 483 ntBASIC3.09□□□□□ -1.92
COL1A1P02452 AC087565.3-202ENST00000642085 1603 ntBASIC3.09□□□□□ -1.92
COL1A1P02452 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
COL1A1P02452 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
COL1A1P02452 AC092079.1-201ENST00000558620 1985 ntBASIC3.08□□□□□ -1.92
COL1A1P02452 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
COL1A1P02452 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC3.08□□□□□ -1.92
COL1A1P02452 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
COL1A1P02452 RNU6ATAC37P-201ENST00000408328 131 ntBASIC3.08□□□□□ -1.92
COL1A1P02452 RNA5SP129-201ENST00000410276 118 ntBASIC3.08□□□□□ -1.92
COL1A1P02452 SDCBPP3-201ENST00000419629 891 ntBASIC3.08□□□□□ -1.92
COL1A1P02452 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
COL1A1P02452 AL356320.1-201ENST00000429616 163 ntBASIC3.08□□□□□ -1.92
COL1A1P02452 CBX1P4-201ENST00000439415 457 ntBASIC3.08□□□□□ -1.92
COL1A1P02452 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
COL1A1P02452 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC3.08□□□□□ -1.92
COL1A1P02452 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
COL1A1P02452 RPS29P21-201ENST00000496272 170 ntBASIC3.08□□□□□ -1.92
COL1A1P02452 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC3.08□□□□□ -1.92
COL1A1P02452 TRAV37-201ENST00000553906 342 ntBASIC3.08□□□□□ -1.92
COL1A1P02452 AL161804.1-201ENST00000555600 708 ntTSL 3 BASIC3.08□□□□□ -1.92
COL1A1P02452 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC3.08□□□□□ -1.92
COL1A1P02452 AC123786.2-201ENST00000603459 275 ntBASIC3.08□□□□□ -1.92
COL1A1P02452 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC3.08□□□□□ -1.92
COL1A1P02452 AC004241.3-201ENST00000611728 517 ntBASIC3.08□□□□□ -1.92
COL1A1P02452 U4.3-201ENST00000621047 82 ntBASIC3.08□□□□□ -1.92
COL1A1P02452 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC3.08□□□□□ -1.92
COL1A1P02452 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
COL1A1P02452 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
COL1A1P02452 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
COL1A1P02452 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
COL1A1P02452 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.07□□□□□ -1.92
COL1A1P02452 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
COL1A1P02452 HSPA8P4-201ENST00000511877 1920 ntBASIC3.07□□□□□ -1.92
COL1A1P02452 SNORA62.2-201ENST00000364672 152 ntBASIC3.07□□□□□ -1.92
COL1A1P02452 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC3.07□□□□□ -1.92
COL1A1P02452 RNU6-603P-201ENST00000411403 107 ntBASIC3.07□□□□□ -1.92
COL1A1P02452 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC3.07□□□□□ -1.92
COL1A1P02452 BX276092.3-201ENST00000424182 230 ntBASIC3.07□□□□□ -1.92
COL1A1P02452 MAGI2-AS1-201ENST00000428298 472 ntTSL 3 BASIC3.07□□□□□ -1.92
COL1A1P02452 RPL23AP74-201ENST00000437246 471 ntBASIC3.07□□□□□ -1.92
COL1A1P02452 CASP3P1-201ENST00000446037 609 ntBASIC3.07□□□□□ -1.92
COL1A1P02452 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC3.07□□□□□ -1.92
COL1A1P02452 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC3.07□□□□□ -1.92
COL1A1P02452 AC010451.2-201ENST00000511514 545 ntTSL 4 BASIC3.07□□□□□ -1.92
COL1A1P02452 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC3.07□□□□□ -1.92
COL1A1P02452 RN7SKP24-201ENST00000515888 284 ntBASIC3.07□□□□□ -1.92
COL1A1P02452 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC3.07□□□□□ -1.92
COL1A1P02452 AC019227.1-201ENST00000526902 510 ntBASIC3.07□□□□□ -1.92
COL1A1P02452 AC025754.2-201ENST00000606491 432 ntBASIC3.07□□□□□ -1.92
COL1A1P02452 AC079228.1-201ENST00000624774 1049 ntBASIC3.07□□□□□ -1.92
COL1A1P02452 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.07□□□□□ -1.92
COL1A1P02452 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.07□□□□□ -1.92
COL1A1P02452 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
COL1A1P02452 AC022826.2-201ENST00000358757 776 ntAPPRIS P1 TSL 4 BASIC3.06□□□□□ -1.92
COL1A1P02452 RNU4-53P-201ENST00000410828 140 ntBASIC3.06□□□□□ -1.92
COL1A1P02452 NDUFB4P5-201ENST00000415445 361 ntBASIC3.06□□□□□ -1.92
COL1A1P02452 MTCO1P39-201ENST00000426148 480 ntBASIC3.06□□□□□ -1.92
COL1A1P02452 AC022022.1-201ENST00000430304 178 ntBASIC3.06□□□□□ -1.92
COL1A1P02452 MTND2P2-201ENST00000434633 945 ntBASIC3.06□□□□□ -1.92
COL1A1P02452 ELOCP10-201ENST00000440624 327 ntBASIC3.06□□□□□ -1.92
COL1A1P02452 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC3.06□□□□□ -1.92
COL1A1P02452 AL645939.1-201ENST00000453429 797 ntBASIC3.06□□□□□ -1.92
COL1A1P02452 AL354710.1-201ENST00000453641 246 ntBASIC3.06□□□□□ -1.92
COL1A1P02452 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC3.06□□□□□ -1.92
COL1A1P02452 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC3.06□□□□□ -1.92
COL1A1P02452 AC093331.1-201ENST00000521474 169 ntBASIC3.06□□□□□ -1.92
COL1A1P02452 AC123904.3-201ENST00000547218 814 ntBASIC3.06□□□□□ -1.92
COL1A1P02452 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
COL1A1P02452 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC3.06□□□□□ -1.92
COL1A1P02452 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC3.06□□□□□ -1.92
COL1A1P02452 AC009063.1-201ENST00000563342 702 ntBASIC3.06□□□□□ -1.92
COL1A1P02452 AC010928.3-201ENST00000587712 541 ntBASIC3.06□□□□□ -1.92
COL1A1P02452 ELOCP34-201ENST00000604436 327 ntBASIC3.06□□□□□ -1.92
COL1A1P02452 LINC00458-206ENST00000607494 849 ntTSL 3 BASIC3.06□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 106.1 ms