Protein–RNA interactions for Protein: P01909

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1P01909 INPP4B-206ENST00000506217 673 ntTSL 1 (best) BASIC2.57□□□□□ -2
HLA-DQA1P01909 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC2.57□□□□□ -2
HLA-DQA1P01909 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC2.57□□□□□ -2
HLA-DQA1P01909 AC008837.1-201ENST00000511513 412 ntBASIC2.57□□□□□ -2
HLA-DQA1P01909 AC092593.2-201ENST00000513866 913 ntBASIC2.57□□□□□ -2
HLA-DQA1P01909 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC2.57□□□□□ -2
HLA-DQA1P01909 RNU1-143P-201ENST00000516296 146 ntBASIC2.57□□□□□ -2
HLA-DQA1P01909 RPL12P22-201ENST00000519073 490 ntBASIC2.57□□□□□ -2
HLA-DQA1P01909 PTS-202ENST00000524931 696 ntTSL 3 BASIC2.57□□□□□ -2
HLA-DQA1P01909 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC2.57□□□□□ -2
HLA-DQA1P01909 MTCO3P15-201ENST00000526563 574 ntBASIC2.57□□□□□ -2
HLA-DQA1P01909 MTCYBP41-201ENST00000528913 1123 ntBASIC2.57□□□□□ -2
HLA-DQA1P01909 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC2.57□□□□□ -2
HLA-DQA1P01909 AP001317.1-201ENST00000531194 960 ntBASIC2.57□□□□□ -2
HLA-DQA1P01909 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC2.57□□□□□ -2
HLA-DQA1P01909 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC2.57□□□□□ -2
HLA-DQA1P01909 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC2.57□□□□□ -2
HLA-DQA1P01909 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC2.57□□□□□ -2
HLA-DQA1P01909 ATF7IP2-206ENST00000543967 998 ntTSL 2 BASIC2.57□□□□□ -2
HLA-DQA1P01909 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC2.57□□□□□ -2
HLA-DQA1P01909 AC093519.1-201ENST00000566109 298 ntBASIC2.57□□□□□ -2
HLA-DQA1P01909 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC2.57□□□□□ -2
HLA-DQA1P01909 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC2.57□□□□□ -2
HLA-DQA1P01909 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC2.57□□□□□ -2
HLA-DQA1P01909 AC006116.7-201ENST00000590141 756 ntBASIC2.57□□□□□ -2
HLA-DQA1P01909 AL669831.4-202ENST00000590817 238 ntBASIC2.57□□□□□ -2
HLA-DQA1P01909 U1.23-201ENST00000610293 146 ntBASIC2.57□□□□□ -2
HLA-DQA1P01909 AC005344.1-201ENST00000613391 459 ntBASIC2.57□□□□□ -2
HLA-DQA1P01909 RNU1-68P-201ENST00000615382 146 ntBASIC2.57□□□□□ -2
HLA-DQA1P01909 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC2.57□□□□□ -2
HLA-DQA1P01909 U1.39-201ENST00000621562 146 ntBASIC2.57□□□□□ -2
HLA-DQA1P01909 AC106858.1-201ENST00000637497 429 ntBASIC2.57□□□□□ -2
HLA-DQA1P01909 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC2.57□□□□□ -2
HLA-DQA1P01909 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC2.57□□□□□ -2
HLA-DQA1P01909 AC093831.2-201ENST00000624393 3427 ntBASIC2.57□□□□□ -2
HLA-DQA1P01909 AC090337.1-201ENST00000579651 2074 ntBASIC2.57□□□□□ -2
HLA-DQA1P01909 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC2.57□□□□□ -2
HLA-DQA1P01909 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC2.56□□□□□ -2
HLA-DQA1P01909 AL079305.1-201ENST00000623159 3008 ntBASIC2.56□□□□□ -2
HLA-DQA1P01909 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC2.56□□□□□ -2
HLA-DQA1P01909 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
HLA-DQA1P01909 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC2.56□□□□□ -2
HLA-DQA1P01909 RNU6-600P-201ENST00000362524 99 ntBASIC2.56□□□□□ -2
HLA-DQA1P01909 RNU6-236P-201ENST00000363886 106 ntBASIC2.56□□□□□ -2
HLA-DQA1P01909 RNU6-335P-201ENST00000364563 113 ntBASIC2.56□□□□□ -2
HLA-DQA1P01909 RNA5SP189-201ENST00000364920 115 ntBASIC2.56□□□□□ -2
HLA-DQA1P01909 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC2.56□□□□□ -2
HLA-DQA1P01909 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC2.56□□□□□ -2
HLA-DQA1P01909 HIST1H2APS3-201ENST00000403259 134 ntBASIC2.56□□□□□ -2
HLA-DQA1P01909 AP000567.1-201ENST00000406413 156 ntBASIC2.56□□□□□ -2
HLA-DQA1P01909 AL023807.1-201ENST00000407932 359 ntBASIC2.56□□□□□ -2
HLA-DQA1P01909 STAT4-203ENST00000409995 709 ntTSL 5 BASIC2.56□□□□□ -2
HLA-DQA1P01909 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC2.56□□□□□ -2
HLA-DQA1P01909 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC2.56□□□□□ -2
HLA-DQA1P01909 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC2.56□□□□□ -2
HLA-DQA1P01909 RPS6P14-201ENST00000425165 719 ntBASIC2.56□□□□□ -2
HLA-DQA1P01909 TRIAP1P1-201ENST00000427062 225 ntBASIC2.56□□□□□ -2
HLA-DQA1P01909 RAC1P8-201ENST00000427086 527 ntBASIC2.56□□□□□ -2
HLA-DQA1P01909 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC2.56□□□□□ -2
HLA-DQA1P01909 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC2.56□□□□□ -2
HLA-DQA1P01909 PTGES3P1-201ENST00000439531 483 ntBASIC2.56□□□□□ -2
HLA-DQA1P01909 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC2.56□□□□□ -2
HLA-DQA1P01909 AC034228.3-201ENST00000446275 562 ntTSL 3 BASIC2.56□□□□□ -2
HLA-DQA1P01909 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC2.56□□□□□ -2
HLA-DQA1P01909 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC2.56□□□□□ -2
HLA-DQA1P01909 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC2.56□□□□□ -2
HLA-DQA1P01909 PABPC1P3-201ENST00000469174 459 ntBASIC2.56□□□□□ -2
HLA-DQA1P01909 AC010301.1-201ENST00000473936 355 ntBASIC2.56□□□□□ -2
HLA-DQA1P01909 ST13P14-201ENST00000474095 734 ntBASIC2.56□□□□□ -2
HLA-DQA1P01909 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC2.56□□□□□ -2
HLA-DQA1P01909 AC118282.1-201ENST00000506408 765 ntBASIC2.56□□□□□ -2
HLA-DQA1P01909 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC2.56□□□□□ -2
HLA-DQA1P01909 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC2.56□□□□□ -2
HLA-DQA1P01909 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC2.56□□□□□ -2
HLA-DQA1P01909 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC2.56□□□□□ -2
HLA-DQA1P01909 RNU4ATAC10P-201ENST00000516967 122 ntBASIC2.56□□□□□ -2
HLA-DQA1P01909 SCARNA20.6-201ENST00000517251 106 ntBASIC2.56□□□□□ -2
HLA-DQA1P01909 PCAT1-201ENST00000519319 734 ntTSL 2 BASIC2.56□□□□□ -2
HLA-DQA1P01909 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC2.56□□□□□ -2
HLA-DQA1P01909 AP003102.1-201ENST00000525638 661 ntBASIC2.56□□□□□ -2
HLA-DQA1P01909 NDUFS5P6-201ENST00000529136 295 ntBASIC2.56□□□□□ -2
HLA-DQA1P01909 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC2.56□□□□□ -2
HLA-DQA1P01909 AP000619.3-201ENST00000535634 1127 ntBASIC2.56□□□□□ -2
HLA-DQA1P01909 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC2.56□□□□□ -2
HLA-DQA1P01909 OR8R1P-201ENST00000543943 764 ntBASIC2.56□□□□□ -2
HLA-DQA1P01909 ARL6IP1P1-201ENST00000545836 610 ntBASIC2.56□□□□□ -2
HLA-DQA1P01909 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC2.56□□□□□ -2
HLA-DQA1P01909 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC2.56□□□□□ -2
HLA-DQA1P01909 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC2.56□□□□□ -2
HLA-DQA1P01909 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC2.56□□□□□ -2
HLA-DQA1P01909 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC2.56□□□□□ -2
HLA-DQA1P01909 AC107982.3-201ENST00000584957 985 ntBASIC2.56□□□□□ -2
HLA-DQA1P01909 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC2.56□□□□□ -2
HLA-DQA1P01909 BNIP3P31-201ENST00000604515 566 ntBASIC2.56□□□□□ -2
HLA-DQA1P01909 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC2.56□□□□□ -2
HLA-DQA1P01909 AF230666.1-202ENST00000608375 870 ntTSL 5 BASIC2.56□□□□□ -2
HLA-DQA1P01909 AC090912.3-201ENST00000609775 533 ntBASIC2.56□□□□□ -2
HLA-DQA1P01909 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC2.56□□□□□ -2
HLA-DQA1P01909 PACRG-211ENST00000621363 360 ntTSL 5 BASIC2.56□□□□□ -2
HLA-DQA1P01909 AL138955.1-201ENST00000622881 1040 ntBASIC2.56□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 102.5 ms