Protein–RNA interactions for Protein: P01130

LDLR, Low-density lipoprotein receptor, humanhuman

Predictions only

Length 860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRP01130 MTND1P32-201ENST00000433043 938 ntBASIC3.94□□□□□ -1.78
LDLRP01130 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC3.94□□□□□ -1.78
LDLRP01130 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC3.94□□□□□ -1.78
LDLRP01130 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC3.94□□□□□ -1.78
LDLRP01130 RPS27AP8-201ENST00000452665 445 ntBASIC3.94□□□□□ -1.78
LDLRP01130 ANKRD26P4-201ENST00000455755 950 ntBASIC3.94□□□□□ -1.78
LDLRP01130 SNORD108-201ENST00000459332 71 ntBASIC3.94□□□□□ -1.78
LDLRP01130 AC087879.1-201ENST00000474343 374 ntBASIC3.94□□□□□ -1.78
LDLRP01130 VN1R105P-201ENST00000486595 910 ntBASIC3.94□□□□□ -1.78
LDLRP01130 RPL35P6-201ENST00000490024 372 ntBASIC3.94□□□□□ -1.78
LDLRP01130 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC3.94□□□□□ -1.78
LDLRP01130 RPL31P61-201ENST00000496160 376 ntBASIC3.94□□□□□ -1.78
LDLRP01130 HMGB1P21-201ENST00000502313 581 ntBASIC3.94□□□□□ -1.78
LDLRP01130 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC3.94□□□□□ -1.78
LDLRP01130 AC107401.1-201ENST00000503426 685 ntBASIC3.94□□□□□ -1.78
LDLRP01130 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC3.94□□□□□ -1.78
LDLRP01130 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC3.94□□□□□ -1.78
LDLRP01130 AC008958.1-201ENST00000511047 682 ntBASIC3.94□□□□□ -1.78
LDLRP01130 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC3.94□□□□□ -1.78
LDLRP01130 MIR2114-201ENST00000516645 80 ntBASIC3.94□□□□□ -1.78
LDLRP01130 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
LDLRP01130 AC134698.4-201ENST00000523451 826 ntBASIC3.94□□□□□ -1.78
LDLRP01130 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC3.94□□□□□ -1.78
LDLRP01130 AP000790.1-201ENST00000528891 737 ntBASIC3.94□□□□□ -1.78
LDLRP01130 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC3.94□□□□□ -1.78
LDLRP01130 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC3.94□□□□□ -1.78
LDLRP01130 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
LDLRP01130 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC3.94□□□□□ -1.78
LDLRP01130 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC3.94□□□□□ -1.78
LDLRP01130 DUXAP1-201ENST00000556632 463 ntBASIC3.94□□□□□ -1.78
LDLRP01130 AC087465.1-201ENST00000560574 245 ntBASIC3.94□□□□□ -1.78
LDLRP01130 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC3.94□□□□□ -1.78
LDLRP01130 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC3.94□□□□□ -1.78
LDLRP01130 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC3.94□□□□□ -1.78
LDLRP01130 AC025946.2-201ENST00000603398 234 ntBASIC3.94□□□□□ -1.78
LDLRP01130 AC080078.2-201ENST00000603766 501 ntBASIC3.94□□□□□ -1.78
LDLRP01130 AL161756.2-201ENST00000604597 246 ntBASIC3.94□□□□□ -1.78
LDLRP01130 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC3.94□□□□□ -1.78
LDLRP01130 AC007490.1-201ENST00000624321 703 ntBASIC3.94□□□□□ -1.78
LDLRP01130 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC3.94□□□□□ -1.78
LDLRP01130 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
LDLRP01130 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
LDLRP01130 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC3.94□□□□□ -1.78
LDLRP01130 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
LDLRP01130 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC3.94□□□□□ -1.78
LDLRP01130 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
LDLRP01130 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
LDLRP01130 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
LDLRP01130 KLRC1-201ENST00000347831 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC3.94□□□□□ -1.78
LDLRP01130 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC3.94□□□□□ -1.78
LDLRP01130 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
LDLRP01130 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC3.93□□□□□ -1.78
LDLRP01130 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
LDLRP01130 Y_RNA.25-201ENST00000362528 102 ntBASIC3.93□□□□□ -1.78
LDLRP01130 RNU6-192P-201ENST00000391253 100 ntBASIC3.93□□□□□ -1.78
LDLRP01130 Y_RNA.619-201ENST00000410951 90 ntBASIC3.93□□□□□ -1.78
LDLRP01130 RAP1BP1-201ENST00000412709 553 ntBASIC3.93□□□□□ -1.78
LDLRP01130 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC3.93□□□□□ -1.78
LDLRP01130 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
LDLRP01130 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC3.93□□□□□ -1.78
LDLRP01130 RPS15AP40-201ENST00000419621 391 ntBASIC3.93□□□□□ -1.78
LDLRP01130 PTP4A1P5-201ENST00000420305 455 ntBASIC3.93□□□□□ -1.78
LDLRP01130 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC3.93□□□□□ -1.78
LDLRP01130 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC3.93□□□□□ -1.78
LDLRP01130 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC3.93□□□□□ -1.78
LDLRP01130 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC3.93□□□□□ -1.78
LDLRP01130 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC3.93□□□□□ -1.78
LDLRP01130 AC234781.2-201ENST00000426370 994 ntBASIC3.93□□□□□ -1.78
LDLRP01130 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC3.93□□□□□ -1.78
LDLRP01130 RPL31P54-201ENST00000429803 370 ntBASIC3.93□□□□□ -1.78
LDLRP01130 AC018644.1-201ENST00000429934 551 ntBASIC3.93□□□□□ -1.78
LDLRP01130 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC3.93□□□□□ -1.78
LDLRP01130 BTF3P10-201ENST00000433415 495 ntBASIC3.93□□□□□ -1.78
LDLRP01130 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC3.93□□□□□ -1.78
LDLRP01130 AC104978.1-201ENST00000449387 391 ntBASIC3.93□□□□□ -1.78
LDLRP01130 GAS5-223ENST00000452197 483 ntTSL 3 BASIC3.93□□□□□ -1.78
LDLRP01130 snoU13.24-201ENST00000458998 104 ntBASIC3.93□□□□□ -1.78
LDLRP01130 AC010301.1-201ENST00000473936 355 ntBASIC3.93□□□□□ -1.78
LDLRP01130 AP000893.1-201ENST00000474462 794 ntBASIC3.93□□□□□ -1.78
LDLRP01130 AC087385.1-201ENST00000475062 312 ntBASIC3.93□□□□□ -1.78
LDLRP01130 RPL7P18-201ENST00000478965 734 ntBASIC3.93□□□□□ -1.78
LDLRP01130 RPS3AP43-201ENST00000479743 781 ntBASIC3.93□□□□□ -1.78
LDLRP01130 GAPDHP36-201ENST00000480688 918 ntBASIC3.93□□□□□ -1.78
LDLRP01130 SNX5P1-201ENST00000505757 1041 ntBASIC3.93□□□□□ -1.78
LDLRP01130 AC104090.1-201ENST00000506341 1171 ntBASIC3.93□□□□□ -1.78
LDLRP01130 AL592156.1-201ENST00000508758 304 ntBASIC3.93□□□□□ -1.78
LDLRP01130 MTCYBP37-201ENST00000510642 1133 ntBASIC3.93□□□□□ -1.78
LDLRP01130 AC010587.2-201ENST00000511727 448 ntBASIC3.93□□□□□ -1.78
LDLRP01130 AC010342.1-201ENST00000514047 877 ntBASIC3.93□□□□□ -1.78
LDLRP01130 RN7SKP82-201ENST00000516786 223 ntBASIC3.93□□□□□ -1.78
LDLRP01130 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC3.93□□□□□ -1.78
LDLRP01130 TRAPPC2P2-201ENST00000517589 409 ntBASIC3.93□□□□□ -1.78
LDLRP01130 IGLVIV-53-201ENST00000520107 367 ntBASIC3.93□□□□□ -1.78
LDLRP01130 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC3.93□□□□□ -1.78
LDLRP01130 IGLVVI-25-1-201ENST00000521893 249 ntBASIC3.93□□□□□ -1.78
LDLRP01130 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC3.93□□□□□ -1.78
LDLRP01130 AC105233.3-201ENST00000531125 744 ntBASIC3.93□□□□□ -1.78
LDLRP01130 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC3.93□□□□□ -1.78
LDLRP01130 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC3.93□□□□□ -1.78
LDLRP01130 AC074029.1-201ENST00000552531 1044 ntBASIC3.93□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 145.1 ms