Protein–RNA interactions for Protein: O96005

CLPTM1, Cleft lip and palate transmembrane protein 1, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1O96005 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
CLPTM1O96005 AC138915.3-201ENST00000562908 1389 ntBASIC3.69□□□□□ -1.82
CLPTM1O96005 RNA5SP391-201ENST00000363456 119 ntBASIC3.69□□□□□ -1.82
CLPTM1O96005 RNU6-931P-201ENST00000363850 107 ntBASIC3.69□□□□□ -1.82
CLPTM1O96005 RNU6-553P-201ENST00000364047 96 ntBASIC3.69□□□□□ -1.82
CLPTM1O96005 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC3.69□□□□□ -1.82
CLPTM1O96005 RNU6-657P-201ENST00000383904 107 ntBASIC3.69□□□□□ -1.82
CLPTM1O96005 RNU6-444P-201ENST00000383988 108 ntBASIC3.69□□□□□ -1.82
CLPTM1O96005 MTCO3P31-201ENST00000405526 789 ntBASIC3.69□□□□□ -1.82
CLPTM1O96005 TRBV24OR9-2-201ENST00000416632 435 ntBASIC3.69□□□□□ -1.82
CLPTM1O96005 AL157831.1-201ENST00000426134 473 ntBASIC3.69□□□□□ -1.82
CLPTM1O96005 RPL31P54-201ENST00000429803 370 ntBASIC3.69□□□□□ -1.82
CLPTM1O96005 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC3.69□□□□□ -1.82
CLPTM1O96005 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC3.69□□□□□ -1.82
CLPTM1O96005 KATNBL1P3-201ENST00000443475 909 ntBASIC3.69□□□□□ -1.82
CLPTM1O96005 RSL24D1P3-201ENST00000449255 495 ntBASIC3.69□□□□□ -1.82
CLPTM1O96005 HMGB3P8-201ENST00000449709 577 ntBASIC3.69□□□□□ -1.82
CLPTM1O96005 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC3.69□□□□□ -1.82
CLPTM1O96005 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC3.69□□□□□ -1.82
CLPTM1O96005 RN7SL330P-201ENST00000469709 307 ntBASIC3.69□□□□□ -1.82
CLPTM1O96005 AC010618.1-201ENST00000469924 477 ntBASIC3.69□□□□□ -1.82
CLPTM1O96005 RN7SL860P-201ENST00000473738 223 ntBASIC3.69□□□□□ -1.82
CLPTM1O96005 OR4G11P-201ENST00000492842 939 ntBASIC3.69□□□□□ -1.82
CLPTM1O96005 RPL7P24-201ENST00000493052 752 ntBASIC3.69□□□□□ -1.82
CLPTM1O96005 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC3.69□□□□□ -1.82
CLPTM1O96005 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC3.69□□□□□ -1.82
CLPTM1O96005 RNA5SP49-201ENST00000516450 115 ntBASIC3.69□□□□□ -1.82
CLPTM1O96005 RN7SKP96-201ENST00000516948 297 ntBASIC3.69□□□□□ -1.82
CLPTM1O96005 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC3.69□□□□□ -1.82
CLPTM1O96005 OR5D17P-201ENST00000531492 978 ntBASIC3.69□□□□□ -1.82
CLPTM1O96005 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC3.69□□□□□ -1.82
CLPTM1O96005 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC3.69□□□□□ -1.82
CLPTM1O96005 CYCSP29-201ENST00000533731 318 ntBASIC3.69□□□□□ -1.82
CLPTM1O96005 AC125611.1-201ENST00000549563 229 ntBASIC3.69□□□□□ -1.82
CLPTM1O96005 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC3.69□□□□□ -1.82
CLPTM1O96005 TVP23BP1-201ENST00000557500 617 ntBASIC3.69□□□□□ -1.82
CLPTM1O96005 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC3.69□□□□□ -1.82
CLPTM1O96005 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC3.69□□□□□ -1.82
CLPTM1O96005 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC3.69□□□□□ -1.82
CLPTM1O96005 ISCA1P3-201ENST00000577104 373 ntBASIC3.69□□□□□ -1.82
CLPTM1O96005 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC3.69□□□□□ -1.82
CLPTM1O96005 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC3.69□□□□□ -1.82
CLPTM1O96005 IPO5P1-202ENST00000600039 287 ntBASIC3.69□□□□□ -1.82
CLPTM1O96005 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC3.69□□□□□ -1.82
CLPTM1O96005 AL451044.1-201ENST00000604867 238 ntBASIC3.69□□□□□ -1.82
CLPTM1O96005 AC010738.1-201ENST00000604970 987 ntBASIC3.69□□□□□ -1.82
CLPTM1O96005 AL592436.1-201ENST00000605135 558 ntBASIC3.69□□□□□ -1.82
CLPTM1O96005 AC124312.4-201ENST00000605533 310 ntBASIC3.69□□□□□ -1.82
CLPTM1O96005 OR2AS2P-201ENST00000606902 342 ntBASIC3.69□□□□□ -1.82
CLPTM1O96005 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC3.69□□□□□ -1.82
CLPTM1O96005 AC008083.4-201ENST00000615076 444 ntBASIC3.69□□□□□ -1.82
CLPTM1O96005 AL445363.3-201ENST00000623080 671 ntBASIC3.69□□□□□ -1.82
CLPTM1O96005 AF246928.1-201ENST00000623768 87 ntBASIC3.69□□□□□ -1.82
CLPTM1O96005 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC3.69□□□□□ -1.82
CLPTM1O96005 MIR7153-201ENST00000637758 57 ntBASIC3.69□□□□□ -1.82
CLPTM1O96005 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
CLPTM1O96005 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
CLPTM1O96005 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.69□□□□□ -1.82
CLPTM1O96005 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC3.69□□□□□ -1.82
CLPTM1O96005 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
CLPTM1O96005 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.69□□□□□ -1.82
CLPTM1O96005 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.68□□□□□ -1.82
CLPTM1O96005 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC3.68□□□□□ -1.82
CLPTM1O96005 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.68□□□□□ -1.82
CLPTM1O96005 AC107081.3-201ENST00000612715 2034 ntBASIC3.68□□□□□ -1.82
CLPTM1O96005 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC3.68□□□□□ -1.82
CLPTM1O96005 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC3.68□□□□□ -1.82
CLPTM1O96005 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC3.68□□□□□ -1.82
CLPTM1O96005 SNORA4.1-201ENST00000364263 144 ntBASIC3.68□□□□□ -1.82
CLPTM1O96005 RNA5SP366-201ENST00000365454 123 ntBASIC3.68□□□□□ -1.82
CLPTM1O96005 AC068538.1-201ENST00000376856 336 ntBASIC3.68□□□□□ -1.82
CLPTM1O96005 RNU6-1293P-201ENST00000384077 107 ntBASIC3.68□□□□□ -1.82
CLPTM1O96005 RNU6-356P-201ENST00000384140 107 ntBASIC3.68□□□□□ -1.82
CLPTM1O96005 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC3.68□□□□□ -1.82
CLPTM1O96005 AL049693.1-201ENST00000402760 611 ntBASIC3.68□□□□□ -1.82
CLPTM1O96005 AL021407.1-201ENST00000404531 386 ntBASIC3.68□□□□□ -1.82
CLPTM1O96005 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
CLPTM1O96005 RAB28P1-201ENST00000411517 641 ntBASIC3.68□□□□□ -1.82
CLPTM1O96005 AC008280.1-201ENST00000418851 412 ntBASIC3.68□□□□□ -1.82
CLPTM1O96005 AC016907.1-201ENST00000419483 435 ntBASIC3.68□□□□□ -1.82
CLPTM1O96005 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC3.68□□□□□ -1.82
CLPTM1O96005 AC233981.1-201ENST00000423224 461 ntBASIC3.68□□□□□ -1.82
CLPTM1O96005 NIPA2P1-201ENST00000426223 976 ntBASIC3.68□□□□□ -1.82
CLPTM1O96005 AL390023.1-201ENST00000428836 262 ntBASIC3.68□□□□□ -1.82
CLPTM1O96005 TRIM60P3Y-201ENST00000432201 673 ntBASIC3.68□□□□□ -1.82
CLPTM1O96005 B3GNT2P1-201ENST00000434960 952 ntBASIC3.68□□□□□ -1.82
CLPTM1O96005 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC3.68□□□□□ -1.82
CLPTM1O96005 TRIM60P9Y-201ENST00000438459 816 ntBASIC3.68□□□□□ -1.82
CLPTM1O96005 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
CLPTM1O96005 AL512326.1-201ENST00000443050 721 ntBASIC3.68□□□□□ -1.82
CLPTM1O96005 MTND2P4-201ENST00000445034 1004 ntBASIC3.68□□□□□ -1.82
CLPTM1O96005 TRIM60P11Y-201ENST00000445313 801 ntBASIC3.68□□□□□ -1.82
CLPTM1O96005 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC3.68□□□□□ -1.82
CLPTM1O96005 AC034228.3-201ENST00000446275 562 ntTSL 3 BASIC3.68□□□□□ -1.82
CLPTM1O96005 NUTF2P3-201ENST00000448540 384 ntBASIC3.68□□□□□ -1.82
CLPTM1O96005 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC3.68□□□□□ -1.82
CLPTM1O96005 AC009963.2-201ENST00000453431 138 ntBASIC3.68□□□□□ -1.82
CLPTM1O96005 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC3.68□□□□□ -1.82
CLPTM1O96005 RAD51AP1P1-201ENST00000484195 1001 ntBASIC3.68□□□□□ -1.82
CLPTM1O96005 AC105137.1-201ENST00000484355 562 ntBASIC3.68□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 99.3 ms