Protein–RNA interactions for Protein: O95476

CTDNEP1, CTD nuclear envelope phosphatase 1, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1O95476 PWRN3-201ENST00000566797 849 ntTSL 5 BASIC3.24□□□□□ -1.89
CTDNEP1O95476 AL512506.1-201ENST00000613918 449 ntBASIC3.24□□□□□ -1.89
CTDNEP1O95476 AC121761.2-201ENST00000617300 689 ntBASIC3.24□□□□□ -1.89
CTDNEP1O95476 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC3.24□□□□□ -1.89
CTDNEP1O95476 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.24□□□□□ -1.89
CTDNEP1O95476 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
CTDNEP1O95476 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
CTDNEP1O95476 AC005183.1-201ENST00000603687 1979 ntBASIC3.23□□□□□ -1.89
CTDNEP1O95476 XPOTP1-201ENST00000443317 2398 ntBASIC3.23□□□□□ -1.89
CTDNEP1O95476 RNU1-112P-201ENST00000364401 164 ntBASIC3.23□□□□□ -1.89
CTDNEP1O95476 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC3.23□□□□□ -1.89
CTDNEP1O95476 METTL5-205ENST00000409837 936 ntAPPRIS ALT1 TSL 1 (best) BASIC3.23□□□□□ -1.89
CTDNEP1O95476 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC3.23□□□□□ -1.89
CTDNEP1O95476 AC008065.1-201ENST00000428525 348 ntBASIC3.23□□□□□ -1.89
CTDNEP1O95476 NEK4P1-201ENST00000433383 879 ntBASIC3.23□□□□□ -1.89
CTDNEP1O95476 AC112220.1-201ENST00000434628 355 ntBASIC3.23□□□□□ -1.89
CTDNEP1O95476 AC007000.2-201ENST00000442564 487 ntBASIC3.23□□□□□ -1.89
CTDNEP1O95476 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC3.23□□□□□ -1.89
CTDNEP1O95476 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC3.23□□□□□ -1.89
CTDNEP1O95476 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC3.23□□□□□ -1.89
CTDNEP1O95476 MTND2P30-201ENST00000456663 382 ntBASIC3.23□□□□□ -1.89
CTDNEP1O95476 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC3.23□□□□□ -1.89
CTDNEP1O95476 RPL5P24-201ENST00000463742 885 ntBASIC3.23□□□□□ -1.89
CTDNEP1O95476 CAB39P1-201ENST00000502277 460 ntBASIC3.23□□□□□ -1.89
CTDNEP1O95476 GPX8-208ENST00000515370 1036 ntTSL 2 BASIC3.23□□□□□ -1.89
CTDNEP1O95476 RNU6-1102P-201ENST00000516149 96 ntBASIC3.23□□□□□ -1.89
CTDNEP1O95476 LINC01603-201ENST00000517343 1134 ntTSL 2 BASIC3.23□□□□□ -1.89
CTDNEP1O95476 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC3.23□□□□□ -1.89
CTDNEP1O95476 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC3.23□□□□□ -1.89
CTDNEP1O95476 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC3.23□□□□□ -1.89
CTDNEP1O95476 AC093014.1-201ENST00000548926 724 ntBASIC3.23□□□□□ -1.89
CTDNEP1O95476 MIR3200-201ENST00000580767 85 ntBASIC3.23□□□□□ -1.89
CTDNEP1O95476 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC3.23□□□□□ -1.89
CTDNEP1O95476 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
CTDNEP1O95476 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC3.23□□□□□ -1.89
CTDNEP1O95476 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.23□□□□□ -1.89
CTDNEP1O95476 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC3.22□□□□□ -1.89
CTDNEP1O95476 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC3.22□□□□□ -1.89
CTDNEP1O95476 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.22□□□□□ -1.89
CTDNEP1O95476 AL021368.2-201ENST00000606125 5352 ntBASIC3.22□□□□□ -1.89
CTDNEP1O95476 AC021755.1-201ENST00000559747 1447 ntBASIC3.22□□□□□ -1.89
CTDNEP1O95476 SNORA9-201ENST00000384215 133 ntBASIC3.22□□□□□ -1.89
CTDNEP1O95476 SNORA48.2-201ENST00000390926 124 ntBASIC3.22□□□□□ -1.89
CTDNEP1O95476 UBE2Q2P12-201ENST00000414573 204 ntBASIC3.22□□□□□ -1.89
CTDNEP1O95476 KRR1P1-201ENST00000419430 803 ntBASIC3.22□□□□□ -1.89
CTDNEP1O95476 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC3.22□□□□□ -1.89
CTDNEP1O95476 AC022018.1-201ENST00000430685 241 ntBASIC3.22□□□□□ -1.89
CTDNEP1O95476 RPL17P35-201ENST00000432217 549 ntBASIC3.22□□□□□ -1.89
CTDNEP1O95476 RAB6C-AS1-202ENST00000433431 123 ntBASIC3.22□□□□□ -1.89
CTDNEP1O95476 TRAPPC13P1-201ENST00000435991 1062 ntBASIC3.22□□□□□ -1.89
CTDNEP1O95476 AL590399.6-201ENST00000446396 307 ntBASIC3.22□□□□□ -1.89
CTDNEP1O95476 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC3.22□□□□□ -1.89
CTDNEP1O95476 RPL9P33-201ENST00000484311 566 ntBASIC3.22□□□□□ -1.89
CTDNEP1O95476 AC110792.2-201ENST00000510278 224 ntBASIC3.22□□□□□ -1.89
CTDNEP1O95476 LINC02480-201ENST00000511875 612 ntTSL 2 BASIC3.22□□□□□ -1.89
CTDNEP1O95476 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC3.22□□□□□ -1.89
CTDNEP1O95476 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC3.22□□□□□ -1.89
CTDNEP1O95476 AC022080.3-201ENST00000544433 482 ntBASIC3.22□□□□□ -1.89
CTDNEP1O95476 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC3.22□□□□□ -1.89
CTDNEP1O95476 AC107016.2-201ENST00000547968 190 ntBASIC3.22□□□□□ -1.89
CTDNEP1O95476 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC3.22□□□□□ -1.89
CTDNEP1O95476 LINC02316-201ENST00000553346 768 ntTSL 3 BASIC3.22□□□□□ -1.89
CTDNEP1O95476 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC3.22□□□□□ -1.89
CTDNEP1O95476 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC3.22□□□□□ -1.89
CTDNEP1O95476 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC3.22□□□□□ -1.89
CTDNEP1O95476 ZNF861P-201ENST00000588126 639 ntBASIC3.22□□□□□ -1.89
CTDNEP1O95476 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC3.22□□□□□ -1.89
CTDNEP1O95476 PCNAP1-202ENST00000595299 752 ntBASIC3.22□□□□□ -1.89
CTDNEP1O95476 AL671309.1-201ENST00000603750 544 ntBASIC3.22□□□□□ -1.89
CTDNEP1O95476 AC069304.3-201ENST00000603938 1084 ntBASIC3.22□□□□□ -1.89
CTDNEP1O95476 AC069234.5-201ENST00000611056 416 ntBASIC3.22□□□□□ -1.89
CTDNEP1O95476 AC245389.2-201ENST00000616023 576 ntBASIC3.22□□□□□ -1.89
CTDNEP1O95476 AC243756.2-201ENST00000618406 463 ntBASIC3.22□□□□□ -1.89
CTDNEP1O95476 AC242843.1-201ENST00000618702 573 ntBASIC3.22□□□□□ -1.89
CTDNEP1O95476 AC004943.1-201ENST00000620814 561 ntTSL 5 BASIC3.22□□□□□ -1.89
CTDNEP1O95476 AC090617.9-201ENST00000623751 147 ntBASIC3.22□□□□□ -1.89
CTDNEP1O95476 FRG1DP-201ENST00000635586 771 ntBASIC3.22□□□□□ -1.89
CTDNEP1O95476 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.22□□□□□ -1.89
CTDNEP1O95476 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
CTDNEP1O95476 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.89
CTDNEP1O95476 AC109315.1-201ENST00000584143 1347 ntBASIC3.21□□□□□ -1.89
CTDNEP1O95476 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
CTDNEP1O95476 Y_RNA.110-201ENST00000363220 99 ntBASIC3.21□□□□□ -1.9
CTDNEP1O95476 RNU1-140P-201ENST00000365040 165 ntBASIC3.21□□□□□ -1.9
CTDNEP1O95476 CFHR4-203ENST00000367418 1066 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
CTDNEP1O95476 MIR128-1-201ENST00000384921 82 ntBASIC3.21□□□□□ -1.9
CTDNEP1O95476 MIR591-201ENST00000385290 95 ntBASIC3.21□□□□□ -1.9
CTDNEP1O95476 AP000567.1-201ENST00000406413 156 ntBASIC3.21□□□□□ -1.9
CTDNEP1O95476 RNA5SP129-201ENST00000410276 118 ntBASIC3.21□□□□□ -1.9
CTDNEP1O95476 RNU4-74P-201ENST00000411280 161 ntBASIC3.21□□□□□ -1.9
CTDNEP1O95476 AL731575.1-201ENST00000413564 418 ntTSL 2 BASIC3.21□□□□□ -1.9
CTDNEP1O95476 BMS1P22-201ENST00000414726 313 ntBASIC3.21□□□□□ -1.9
CTDNEP1O95476 B3GALNT1P1-201ENST00000420569 975 ntBASIC3.21□□□□□ -1.9
CTDNEP1O95476 TEX41-204ENST00000423031 491 ntTSL 4 BASIC3.21□□□□□ -1.9
CTDNEP1O95476 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC3.21□□□□□ -1.9
CTDNEP1O95476 AL513321.1-201ENST00000441175 761 ntBASIC3.21□□□□□ -1.9
CTDNEP1O95476 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC3.21□□□□□ -1.9
CTDNEP1O95476 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC3.21□□□□□ -1.9
CTDNEP1O95476 RN7SL297P-201ENST00000483161 293 ntBASIC3.21□□□□□ -1.9
CTDNEP1O95476 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC3.21□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 99.4 ms