Protein–RNA interactions for Protein: O75643

SNRNP200, U5 small nuclear ribonucleoprotein 200 kDa helicase, humanhuman

Known RBP Predictions only

Length 2,136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200O75643 VN1R48P-201ENST00000448149 1036 ntBASIC2.42□□□□□ -2.02
SNRNP200O75643 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC2.42□□□□□ -2.02
SNRNP200O75643 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC2.42□□□□□ -2.02
SNRNP200O75643 AC126182.1-201ENST00000478134 357 ntBASIC2.42□□□□□ -2.02
SNRNP200O75643 RPL23AP94-201ENST00000512518 302 ntBASIC2.42□□□□□ -2.02
SNRNP200O75643 AC103783.1-201ENST00000520506 373 ntBASIC2.42□□□□□ -2.02
SNRNP200O75643 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.42□□□□□ -2.02
SNRNP200O75643 AC079089.1-202ENST00000528800 1256 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
SNRNP200O75643 RGS4-209ENST00000531057 544 ntTSL 4 BASIC2.42□□□□□ -2.02
SNRNP200O75643 AHI1-217ENST00000534469 680 ntTSL 3 BASIC2.42□□□□□ -2.02
SNRNP200O75643 MIR5092-201ENST00000583139 88 ntBASIC2.42□□□□□ -2.02
SNRNP200O75643 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC2.42□□□□□ -2.02
SNRNP200O75643 DARS-AS1-221ENST00000608471 532 ntTSL 5 BASIC2.42□□□□□ -2.02
SNRNP200O75643 AL451074.6-201ENST00000608512 729 ntBASIC2.42□□□□□ -2.02
SNRNP200O75643 AL590808.1-201ENST00000618696 141 ntBASIC2.42□□□□□ -2.02
SNRNP200O75643 SCARNA15.3-201ENST00000626315 122 ntBASIC2.42□□□□□ -2.02
SNRNP200O75643 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.42□□□□□ -2.02
SNRNP200O75643 SCARNA4.1-201ENST00000628597 123 ntBASIC2.42□□□□□ -2.02
SNRNP200O75643 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC2.42□□□□□ -2.02
SNRNP200O75643 AL049780.3-201ENST00000624612 1583 ntBASIC2.42□□□□□ -2.02
SNRNP200O75643 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
SNRNP200O75643 MTND5P27-201ENST00000428871 1720 ntBASIC2.42□□□□□ -2.02
SNRNP200O75643 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC2.42□□□□□ -2.02
SNRNP200O75643 EIF5P1-201ENST00000400019 1231 ntBASIC2.42□□□□□ -2.02
SNRNP200O75643 MTND4LP20-201ENST00000402379 270 ntBASIC2.42□□□□□ -2.02
SNRNP200O75643 EIF4EBP2P3-201ENST00000403144 334 ntBASIC2.42□□□□□ -2.02
SNRNP200O75643 NANOGP5-201ENST00000424456 877 ntBASIC2.42□□□□□ -2.02
SNRNP200O75643 TRIAP1P1-201ENST00000427062 225 ntBASIC2.42□□□□□ -2.02
SNRNP200O75643 MTATP6P11-201ENST00000428071 670 ntBASIC2.42□□□□□ -2.02
SNRNP200O75643 AC244505.4-201ENST00000434905 287 ntBASIC2.42□□□□□ -2.02
SNRNP200O75643 SSXP5-201ENST00000443473 287 ntBASIC2.42□□□□□ -2.02
SNRNP200O75643 SLC31A1P1-201ENST00000451221 567 ntBASIC2.42□□□□□ -2.02
SNRNP200O75643 RPL23AP11-201ENST00000475260 469 ntBASIC2.42□□□□□ -2.02
SNRNP200O75643 AC010445.1-201ENST00000507674 440 ntTSL 5 BASIC2.42□□□□□ -2.02
SNRNP200O75643 AC114781.4-201ENST00000513707 639 ntBASIC2.42□□□□□ -2.02
SNRNP200O75643 AC022790.1-201ENST00000522872 204 ntBASIC2.42□□□□□ -2.02
SNRNP200O75643 AC024224.1-201ENST00000538284 609 ntBASIC2.42□□□□□ -2.02
SNRNP200O75643 MTCO3P13-201ENST00000577757 781 ntBASIC2.42□□□□□ -2.02
SNRNP200O75643 MIR6817-201ENST00000615588 66 ntBASIC2.42□□□□□ -2.02
SNRNP200O75643 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC2.42□□□□□ -2.02
SNRNP200O75643 USP44-208ENST00000552440 1818 ntTSL 5 BASIC2.41□□□□□ -2.02
SNRNP200O75643 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC2.41□□□□□ -2.02
SNRNP200O75643 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
SNRNP200O75643 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
SNRNP200O75643 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
SNRNP200O75643 ARF4P3-201ENST00000397387 509 ntBASIC2.41□□□□□ -2.02
SNRNP200O75643 UQCRFS1P3-201ENST00000407697 385 ntBASIC2.41□□□□□ -2.02
SNRNP200O75643 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC2.41□□□□□ -2.02
SNRNP200O75643 RPL7P36-201ENST00000444633 681 ntBASIC2.41□□□□□ -2.02
SNRNP200O75643 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC2.41□□□□□ -2.02
SNRNP200O75643 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC2.41□□□□□ -2.02
SNRNP200O75643 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC2.41□□□□□ -2.02
SNRNP200O75643 AC067852.4-201ENST00000590314 478 ntBASIC2.41□□□□□ -2.02
SNRNP200O75643 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.41□□□□□ -2.02
SNRNP200O75643 AC007621.1-201ENST00000604544 437 ntBASIC2.41□□□□□ -2.02
SNRNP200O75643 AC018754.1-201ENST00000607486 925 ntBASIC2.41□□□□□ -2.02
SNRNP200O75643 CTSLP2-204ENST00000629029 392 ntBASIC2.41□□□□□ -2.02
SNRNP200O75643 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
SNRNP200O75643 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
SNRNP200O75643 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
SNRNP200O75643 SEPT7P7-201ENST00000420492 1301 ntBASIC2.41□□□□□ -2.02
SNRNP200O75643 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
SNRNP200O75643 AL672167.1-206ENST00000356293 943 ntBASIC2.41□□□□□ -2.02
SNRNP200O75643 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
SNRNP200O75643 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
SNRNP200O75643 RNA5SP80-201ENST00000410475 111 ntBASIC2.41□□□□□ -2.02
SNRNP200O75643 TRAPPC2P9-201ENST00000434556 343 ntBASIC2.41□□□□□ -2.02
SNRNP200O75643 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC2.41□□□□□ -2.02
SNRNP200O75643 AC078918.1-201ENST00000498515 228 ntBASIC2.41□□□□□ -2.02
SNRNP200O75643 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC2.41□□□□□ -2.02
SNRNP200O75643 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC2.4□□□□□ -2.02
SNRNP200O75643 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC2.4□□□□□ -2.02
SNRNP200O75643 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.4□□□□□ -2.02
SNRNP200O75643 AC009965.2-201ENST00000425328 970 ntBASIC2.4□□□□□ -2.03
SNRNP200O75643 AC133134.1-201ENST00000466800 359 ntBASIC2.4□□□□□ -2.03
SNRNP200O75643 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC2.4□□□□□ -2.03
SNRNP200O75643 AC092185.1-201ENST00000491371 97 ntBASIC2.4□□□□□ -2.03
SNRNP200O75643 MTND4LP22-201ENST00000508209 276 ntBASIC2.4□□□□□ -2.03
SNRNP200O75643 UBTFL10-201ENST00000528532 562 ntBASIC2.4□□□□□ -2.03
SNRNP200O75643 AP004242.1-201ENST00000533701 349 ntBASIC2.4□□□□□ -2.03
SNRNP200O75643 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC2.4□□□□□ -2.03
SNRNP200O75643 AC022146.1-201ENST00000595307 847 ntBASIC2.4□□□□□ -2.03
SNRNP200O75643 AC008277.2-201ENST00000605196 797 ntBASIC2.4□□□□□ -2.03
SNRNP200O75643 AC009303.2-205ENST00000627670 1091 ntTSL 5 BASIC2.4□□□□□ -2.03
SNRNP200O75643 LINC02109-206ENST00000629527 854 ntTSL 5 BASIC2.4□□□□□ -2.03
SNRNP200O75643 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
SNRNP200O75643 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
SNRNP200O75643 ZNF33CP-201ENST00000432492 2030 ntBASIC2.4□□□□□ -2.03
SNRNP200O75643 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC2.4□□□□□ -2.03
SNRNP200O75643 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
SNRNP200O75643 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
SNRNP200O75643 AL359693.1-201ENST00000614959 2407 ntBASIC2.39□□□□□ -2.03
SNRNP200O75643 RNU1-100P-201ENST00000365255 165 ntBASIC2.39□□□□□ -2.03
SNRNP200O75643 AL360182.1-201ENST00000397433 468 ntBASIC2.39□□□□□ -2.03
SNRNP200O75643 VN1R31P-201ENST00000417498 730 ntBASIC2.39□□□□□ -2.03
SNRNP200O75643 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC2.39□□□□□ -2.03
SNRNP200O75643 OR6K1P-201ENST00000456766 971 ntBASIC2.39□□□□□ -2.03
SNRNP200O75643 AC128713.1-201ENST00000471495 306 ntBASIC2.39□□□□□ -2.03
SNRNP200O75643 RN7SL636P-201ENST00000497504 294 ntBASIC2.39□□□□□ -2.03
SNRNP200O75643 HIGD1AP3-201ENST00000515857 278 ntBASIC2.39□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 97.6 ms